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LOCUS XM_017140715 3667 bp mRNA linear INV 09-DEC-2024 (IntS2), mRNA. ACCESSION XM_017140715 VERSION XM_017140715.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140715.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3667 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3667 /gene="IntS2" /note="integrator complex subunit 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056746" CDS 224..3553 /gene="IntS2" /codon_start=1 /product="integrator complex subunit 2" /protein_id="XP_016996204.1" /db_xref="GeneID:108056746" /translation="MPVKMYDVSPRVFCAMQNLDITLLASYPEAEIRPVLPSLVRMSL LSPLDNTESSMESRKQILAVLIGIEVVNSIVSYLQVNYHELENELKKELQARQKSAFF EGQQHEYGLQSGIALGFERADVARKVRVVLSEIFNLQQQVSEQKPAAHSEMLDDGIYL EEVVDILCIALAELPSLLNILELTDALVHVPNGHRIICALVANFPDCYRDVVSHVIAN CDEDGSDGKHRLMLLMGLSEMNPSQALANRSMCVDMLKVPSFMLKLTLKHPEDLIAFL TGLLLGNDQNLRSWFAVYIRSSQKRKGDALNLVRVELLQKVIQTTTNASELRDFNLQG AVLLRLYCALRGIGGLKFNDDEINALSQLVTSCPQATPSGVRFVTLALCMLIACPSLV STIPLENKAVEWLQWLIREDAFFCKRSGTSTSLGEMLLLLAIHFHSNQISAISEMVCS TLAMKIPIRPNSTNRIKQLFTQDLFTEQVVALHAVRVPVTPNLNGTIPGYLPVHCIHQ LLKSRTFLKHKVPIKSWIFKQICSSVRPVHPVMPALVEVFVNTLIIPNPTGKVNIDHM HRPFTEAEILHVFRTSKLTFFAEELPQMAERSSEELAQIEVTCPLTAQLLMIYYLMLY EDTRLMNLTALGGRKQKEYSNNFLGGLPLKYLLQKAHHYHHDYLSLFHPLLRLIISNY PHLSMVDDWLEEHNLGNQGSAAIIELVDSKRELRPEQLDRALAAIQTKPHLAIRVFKQ LLQMPPERQAQYGQQLVQHLPVVFAKTVPRYIKDLYNEIWLRLNAVLPTTLWIMSLRA ITNSSDSINRRTFANESLLEPMEVLSCPRYVFCSPYLLMILLRILKGSLAASKTYLNV HMQQKQVLDKNGLVQTDADREELKTTLIASQESAAVHILLEVLEYMASKASDRVSHLE LREIQGIIGTYVHQAFISEPSLAKLVHFQTYPKSVIPMIVASVPSMHICIDFVHEFLN VTEMDKQIFTIELTSHLVLNYSIPKSLGVSKFCLNVIQTTLSLLTASAKCKFLRNVLP AMVRFVETFPILADDCVNILMTTGRSLHSQSSLGVTTMQMPLTESAKLCSYRDAQLHI IMIEDAFKALVTAVMQKSELY" misc_feature 293..3409 /gene="IntS2" /note="Integrator complex subunit 2; Region: INTS2; pfam14750" /db_xref="CDD:464296" polyA_site 3667 /gene="IntS2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatataccat ctccctcgca ggagacgagt gttgttttct tttggatgcg gtggattcgc 61 ggattcttgg gcattccctg gtgtatccaa cgctcgccga gattaaccca taccccggtg 121 ccgggctttt gagcagggaa aagccgccgg cgaggccaaa agagcgggaa aaccaagcct 181 ttagccggga gcaacaagtt ggaacgcgga cgaccatccc aagatgccgg tgaagatgta 241 cgatgtgtcg ccgcgcgtct tctgcgccat gcagaacctg gacatcaccc tgctggccag 301 ctacccggag gcggagatcc ggccggtgct gccgtcgctg gtgcggatga gcctgctctc 361 gccgctggac aacacggagt cgtcgatgga gtcgcgcaag cagatcctcg ccgtgctcat 421 tggcatcgag gtggtgaata gcatagtctc ctacctgcag gtcaactacc atgagctgga 481 gaacgagcta aagaaggagc tgcaggcgcg ccagaagtcg gccttcttcg aggggcagca 541 acatgagtat ggactccaat cgggcatcgc tttgggtttc gagcgggcgg atgtggcgcg 601 caaggtgcgc gtggtgctct cggagatctt caatctgcag cagcaggtct ccgagcagaa 661 gccggccgcc cactcggaaa tgctcgacga tggcatttat ttggaggagg tggtggacat 721 cctctgcatc gccttggccg agctgccctc gctgctgaac atcctggagc taaccgatgc 781 cctcgtccat gtgcccaacg gccatcggat catctgcgct ttggtggcca actttccgga 841 ctgctatcgc gatgtggttt cccatgtgat cgccaactgt gacgaggacg gcagcgatgg 901 caagcaccgg ctgatgctgc tcatgggcct cagcgaaatg aatccctccc aggcgctggc 961 caatcggtcc atgtgcgtgg acatgctcaa ggtgccgtcg ttcatgctca agctcacgct 1021 caagcatccc gaggatctga tcgccttcct cacgggtctg ctgctgggca atgaccagaa 1081 tctgcgctcc tggttcgccg tctacatccg ctccagccag aagcgcaagg gtgatgccct 1141 gaatctggtg cgcgtggagc tgctgcagaa ggtgatccag acgacgacga atgcctcgga 1201 gctgcgcgac ttcaatctcc agggagcggt gctgctgcgt ctgtactgcg cccttcgcgg 1261 catcggtggc ctcaagttca acgacgacga gatcaacgcg ctgtcccagc tggtcaccag 1321 ttgtccacag gcgacgccct cgggcgtgag attcgtaacg ctagcgctgt gcatgctcat 1381 cgcctgcccc tcgctggtgt ccaccattcc gctggagaac aaggccgtcg aatggctgca 1441 gtggctcatt cgcgaggatg ccttcttctg caagcgctcc ggcacgagca cctcgctggg 1501 cgagatgctc ctcctgctgg ccattcactt tcacagcaat cagatctcgg ccatcagcga 1561 gatggtctgc tcgacgctgg ccatgaaaat acccatccgg ccaaatagca cgaatcggat 1621 caagcagctc ttcacgcagg atttgttcac cgaacaggtg gtggcattgc atgcagttcg 1681 agttcccgtg acgccgaatt taaatggcac cataccgggc tacctgccgg tgcactgcat 1741 ccatcagctg ctcaagtcgc gaacgtttct caagcacaag gtgccgatca agtcgtggat 1801 cttcaagcag atatgcagct cggtgaggcc agtgcatccg gtgatgcctg cgttggtgga 1861 ggtgtttgtc aacacgctga tcataccgaa tcccacgggc aaggtgaata tcgatcatat 1921 gcatcgaccc ttcaccgagg ccgaaattct gcatgttttt cgcacctcga agctcacttt 1981 cttcgccgag gaactgccgc agatggcgga gcggagcagc gaggagctgg cgcagatcga 2041 ggtgacctgt ccgctgaccg cccagctgct gatgatctac tatttgatgc tctacgagga 2101 cacgcggctg atgaacctca cggcgcttgg ggggcgcaag cagaaggagt actcgaacaa 2161 cttcctgggc ggtctgccgc tgaagtattt gctacagaag gctcaccact atcaccacga 2221 ctatctctcg ctcttccatc cgctgctgcg tttgattatc tccaactatc cgcatctcag 2281 catggtggac gactggctgg aggagcataa tttgggcaac cagggcagtg ccgccattat 2341 cgagctggtg gacagcaagc gagagctgcg gccggagcag ctggatcggg cactggccgc 2401 catccagacg aagccgcatc tggccatccg agtgttcaag cagctgctcc agatgccgcc 2461 ggagcggcag gcgcagtacg ggcagcagct ggtgcagcat ctgccggtgg tgtttgccaa 2521 aacggtgccg cggtatatca aggatctgta caatgaaatc tggctgcgcc tgaacgccgt 2581 gctgcccacc accctgtgga ttatgtcgct gcgggcgatt accaacagtt cggactccat 2641 taaccggcgg accttcgcca acgagagcct gctggagccc atggaggtgt tgagctgccc 2701 tcgctacgtc ttctgctcgc cgtatctgct gatgatcctg ctgcgcatcc tcaaaggcag 2761 cctggccgcc tcgaagacct acctcaatgt gcacatgcag cagaaacagg tgctggacaa 2821 gaacggcctg gtgcagacgg acgcggatcg ggaggagctg aagacgacgc tgattgcctc 2881 gcaggagagc gccgccgtgc acattctgct cgaggtgctc gagtatatgg ccagcaaggc 2941 gtcggatcgg gtgtcgcatc tggagctgcg cgagatacag ggcatcattg ggacctatgt 3001 ccatcaggcg ttcatctcgg agccctcgct ggccaagctg gtgcatttcc aaacgtatcc 3061 caagtccgtg atccccatga ttgtggccag cgtgccgtcg atgcatattt gcattgattt 3121 cgttcacgaa tttctcaacg tgaccgaaat ggacaagcag atcttcacca ttgagctaac 3181 ctcgcatctg gtgctcaact attcgatacc caagagtctg ggcgtctcga agttctgcct 3241 gaacgtcatc cagacgacgt tgtccctgct caccgcctcg gccaagtgca agttcctgcg 3301 gaacgtgctg ccggcgatgg tgcgatttgt ggaaacgttt cccattttgg ctgacgattg 3361 cgtcaacatc ctgatgacca ccggccgtag cctgcactca cagtcgtcgc tgggcgtgac 3421 caccatgcag atgccgctga ccgagagcgc aaagctgtgc tcctaccgcg atgcccagct 3481 gcacatcatc atgatcgagg acgccttcaa ggcgctggtc accgccgtca tgcagaagtc 3541 ggaactgtat tagttggatt cgatcgagtc gtaagtgatt ataatagtgc ttgtaaaatt 3601 gataataacg accaatgacc ggaataaaca tttaaccact gcaatggtgg aataattagg 3661 aatgaat