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LOCUS XM_017140713 3022 bp mRNA linear INV 09-DEC-2024 regulator WDR6 (LOC108056744), mRNA. ACCESSION XM_017140713 VERSION XM_017140713.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140713.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3022 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3022 /gene="LOC108056744" /note="tRNA (34-2'-O)-methyltransferase regulator WDR6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056744" CDS 56..3013 /gene="LOC108056744" /codon_start=1 /product="tRNA (34-2'-O)-methyltransferase regulator WDR6" /protein_id="XP_016996202.2" /db_xref="GeneID:108056744" /translation="MVLISDAFGLDVSPNGILVGHGDQAVLYSSKAKVEMPVRLREGK VRGFAWSSQRSSQRLLLLYSENEYSLILRSSSSSEEDHYELIYEGETKDWINAAQFLD DDDNESVDKRRFVLHTAHSVVLYMEYDLKSPGDCHILELARCTDSSILYYTKLHGKSF EKLAITSGNAFGELLVWQTQIPLESESDSQSMMKTYPLLLRLPAHNGVIHSIDFSLDH KLLVTTSDDRSVKFWNLQKPGDWTTAKVQPIFSCFGHSSRVMCVEIFEMDGQLLVASG GEDSYICLWSSSGELLLKRRQHFGAPIWKLGFSRDDSTLYSTSSTGNLVAQNLKEILQ TPRNSPTLLSNFTDANEFVRNLKFVTDELIIGLSSSNRLYYTRITGDSLQANHWLVAS DFPSYKRTVLEVCDGIVATCGHRRITLHRYNPKTNDFELIFDGIRMKGTIRSFQFLSR DLYLVSDNLGYCLLLRSHQLSIDSHIALFNNREPWITAALLISEKCLLLGNREGHVML YQRSDTSSDFQLKDTIKFLHGKMGSNFFKLISINDKCARILSGGHEAFLKYLQVDLVD FTLCVAQRESVPLAWVEASPSEDLILGFNDNHIVAWSRQHDVLLQLACGGGNRCWDFQ LSDNLLSIAFVKQKRVLFHRNNLYNKVTSRIKDIQPNSWHTRNCNTLRLLRHQEQTFI VSAGDDNIIKVTQVLKNSLLQCAELHSHISTVRSLQIHRLQSSTWLIFSVGGRSQLCI SQLSIDMSNICHITELSTHTLQNVMVEKTKTSTIEARLMAIDVAQHSEAETFSIYVAS ADGNISHYIWNLAEPSQLHLKSFADLKRCPLSIQWIGNKSILLVSTSNGEVYGFDEAL QTICIQLQLHVTGINTIDIYVNDNLLHILSGGDDENIKYTVLNLDSKSIEFKTEFLGL HNAQVNALAINCLGSELHAYSCSIDRQIYRIDLRSHVYSRIGYTCIADVKGMLIDEQQ RLYFYGCGLQIQS" misc_feature <548..>1027 /gene="LOC108056744" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 683..817 /gene="LOC108056744" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 962..1096 /gene="LOC108056744" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1112..1177 /gene="LOC108056744" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2081..2881 /gene="LOC108056744" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature order(2105..2107,2117..2119,2135..2140,2174..2179, 2246..2248,2258..2260,2321..2323,2336..2338,2354..2359, 2384..2386,2438..2440,2453..2455,2477..2482,2522..2527, 2579..2581,2591..2593,2609..2614,2648..2653,2708..2710, 2723..2725,2747..2752,2795..2800,2858..2860,2870..2872) /gene="LOC108056744" /note="structural tetrad [active]" /db_xref="CDD:238121" misc_feature 2537..2650 /gene="LOC108056744" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 2666..2791 /gene="LOC108056744" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" ORIGIN 1 ggtcacacta agtgatcaaa acaaaacgtg tttgttatta aactgagttt ttgtgatggt 61 tttgatttcg gacgcttttg gcctggacgt ctcccccaat gggatattgg ttggtcatgg 121 agatcaggcg gtgttgtaca gctcaaaggc caaagtggaa atgccggttc gcctgcggga 181 gggaaaagtt cgaggatttg cgtggagttc tcagaggagt tcccaaagat tgttactgct 241 gtatagcgaa aatgaatact ccttgatttt aaggagctcc tccagttccg aggaagacca 301 ctatgaactc atctacgagg gcgaaacgaa ggattggatc aatgcagccc agtttttgga 361 tgacgatgac aacgaatcgg ttgataaacg gcgatttgtc ctgcacacag cccatagtgt 421 cgtcctgtat atggaatatg atcttaagtc gcctggggat tgtcatatat tggaattggc 481 ccgatgcaca gatagttcta ttctatacta caccaaattg catggcaaat ccttcgaaaa 541 actggccata actagcggaa atgcctttgg agaactgctg gtgtggcaaa cgcagattcc 601 ccttgaatct gaatccgatt cccaatccat gatgaagacc tatcccctgc tcctgcgtct 661 gccagcccac aatggagtta tacactcgat tgatttcagc ctagatcata agttattggt 721 caccacatcg gatgatcgat cggtcaagtt ctggaatcta caaaaaccgg gggattggac 781 caccgccaaa gttcaaccca ttttcagttg cttcggtcac agttcacgcg taatgtgcgt 841 ggagatcttc gaaatggatg gtcagctact agtggccagc ggcggtgagg attcctacat 901 ctgcctttgg agttcatctg gagaactgct cctaaaacgt cgtcaacact ttggggcacc 961 catctggaaa ctcggattca gcagagatga tagcacgcta tatagcacca gttctaccgg 1021 taatttagtc gcccagaacc ttaaagagat cctccagaca cccagaaact ccccaacttt 1081 gctaagtaac tttaccgatg ccaatgagtt cgtgagaaat ctcaagttcg taacggatga 1141 gctaattatc ggtttgagta gctcgaatcg gttgtattac acgcgaatta cgggggattc 1201 cttgcaggcg aaccactggc tggtggccag cgatttcccc agctataaac gcactgtttt 1261 ggaggtctgc gatggcatcg tggctacctg tggccaccgg cgcataactc tccaccgtta 1321 caacccaaag acaaatgatt tcgagctaat tttcgatggc atccgaatga agggcaccat 1381 ccgctcgttt cagttcctca gcagggatct ctacctggtc tccgataacc tcggctactg 1441 tctgctccta agaagccacc agctcagcat cgactcgcac attgcgctgt tcaacaaccg 1501 tgagccttgg ataacggctg ccctgcttat ctcggagaaa tgcctcctgc tgggcaatcg 1561 cgagggtcat gtgatgctct accagcgcag tgatacctct agtgactttc aattgaagga 1621 taccattaag tttcttcatg gcaaaatggg ttcaaacttc tttaagctga tttctattaa 1681 tgataagtgt gctcgcattt taagcggtgg ccatgaggcc tttttaaaat acctccaagt 1741 ggatttagtg gactttactc tatgcgttgc ccaacgcgag agtgttcccc ttgcctgggt 1801 ggaagcctcg ccctcggagg acctcatcct gggcttcaac gacaatcaca ttgtggcctg 1861 gtcccgccag cacgatgtcc tgctgcagtt ggcctgcggc ggtggaaatc gctgctggga 1921 cttccaattg agcgataatc tactaagcat agcctttgtc aagcagaagc gcgtgctctt 1981 ccatcggaac aacctgtaca acaaagtcac cagtcgaatt aaggacatac aaccgaatag 2041 ctggcataca cgcaactgca atactcttcg acttcttaga caccaggaac aaacctttat 2101 tgtctccgct ggcgatgata atatcataaa ggtgacgcag gttctcaaga attcgctgct 2161 tcagtgcgct gaactgcact cgcacatttc aactgttcgc agcctgcaaa tacatcgcct 2221 ccaatcgagt acatggctta ttttctcagt tggcggaaga tcgcagctct gtattagcca 2281 gctaagcata gacatgtcga atatttgtca catcacagag ttatccaccc atacgctgca 2341 gaatgtaatg gtagagaaaa ctaaaacaag caccattgaa gcccgactga tggcaattga 2401 tgttgcccag cattccgagg cggaaacttt ctcaatttat gtggcctccg ccgatggaaa 2461 cataagccat tatatctgga acctagcaga accctcgcaa ctccacctaa agtcctttgc 2521 agacctcaaa cgctgcccac tgagcattca gtggattgga aacaagtcta tactactcgt 2581 atccacatca aacggcgaag tttacggctt cgatgaagca ctacaaacga tatgcattca 2641 actgcagctc catgtgacgg gcattaatac gatagatata tacgtaaatg ataatctgct 2701 gcacatttta tcaggaggcg atgatgagaa tatcaagtac acagtactca atttggatag 2761 caagagcatc gagtttaaaa ctgagttctt ggggcttcac aatgcccagg tgaatgcctt 2821 ggccataaat tgtctgggat ctgaattgca tgcctatagc tgcagcatag atagacagat 2881 ctataggata gatctcagga gccatgtgta cagccgaatt ggttacacct gcatagcgga 2941 tgtgaaggga atgctcatcg acgaacagca aagattatat ttctacggct gcggattgca 3001 aattcaaagt tagctggatg tt