PREDICTED: Drosophila takahashii leucine-rich repeat

LOCUS       XM_017140692            1831 bp    mRNA    linear   INV 09-DEC-2024
            flightless-interacting protein 2 (LOC108056736), transcript variant
            X2, mRNA.
ACCESSION   XM_017140692
VERSION     XM_017140692.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140692.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1831
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1831
                     /gene="LOC108056736"
                     /note="leucine-rich repeat flightless-interacting protein
                     2; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:108056736"
     CDS             186..1376
                     /gene="LOC108056736"
                     /codon_start=1
                     /product="leucine-rich repeat flightless-interacting
                     protein 2"
                     /protein_id="XP_016996181.1"
                     /db_xref="GeneID:108056736"
                     /translation="MESISTTGRRRNNMRINAEDNALDQITKEAEARLAARRQARAEA
                     REIRMKELERQQKEQEITADRVFDMQNSTAVGPEPLSVHPVRLVYGGLLNVTRASASR
                     RSSEDSVEEEGRSFRDFKHELKDVEERFRKAMITNAQLDNDRASQAYEVKLLKDKCEI
                     MEESFAQLQREFKEKMRDCNALKRNLDRANLELKLVQGQLNERDSLIAEQGLLIVAVE
                     NADGSDAKRALVSVENAKVLASVQGSLDVRLKKFSDEKQRLLSEVQKLHEQLDEYKSD
                     GMTGRRSLSQGSFGDENDYEAQRESNKIISDHKYKLQKAEQEIANLQSSLARSETQVI
                     RYKSTAEAAEKAEAELKVERRKLQREHREILEKLEEAETSNNHLLKRLDKLKNAKSAI
                     LKDL"
     misc_feature    324..1148
                     /gene="LOC108056736"
                     /note="LRRFIP family; Region: LRRFIP; pfam09738"
                     /db_xref="CDD:462869"
     polyA_site      1831
                     /gene="LOC108056736"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 taattaattt atagattttg tcaccttgtg cccaagtacc tgaggcggag tgttgggaac
       61 aacttgaagt gcttccgaga ggcacattgc cgcccagaga tacacatgca taaattaggg
      121 gaaccagatc gtgcgaccgc atacgctaat tataaaacgt aaagttaaaa ttgagctcag
      181 attcaatgga aagtatcagc accacaggtc ggcgacggaa caacatgcga atcaatgccg
      241 aggataatgc cctggatcaa attacaaaag aggcggaagc gcgactggcc gcgcgtcgac
      301 aggcgcgtgc cgaggcccgg gagatccgca tgaaggagct ggagcggcag cagaaggagc
      361 aggagataac cgccgaccgg gtgttcgaca tgcagaactc cactgcagtg ggcccagagc
      421 ccctctccgt gcatcccgtg cgcctcgtct acggcggcct gctaaacgta acccgtgcct
      481 cagcctcccg ccgcagcagc gaggactccg tggaggagga gggccgaagt tttcgcgact
      541 tcaagcacga gcttaaggat gtcgaagaac ggtttcggaa ggccatgata acaaacgccc
      601 aactggacaa cgatcgcgcc tcgcaggcct acgaggttaa gctgcttaaa gacaagtgcg
      661 agatcatgga ggagtcattc gcacagctgc agcgcgagtt caaggagaag atgcgcgact
      721 gcaatgccct caagcggaac ctggaccgcg ccaatctgga gcttaaacta gtacaaggac
      781 agctgaacga gcgcgactcg ttgatagccg agcagggcct gctgattgtg gcggtggaga
      841 atgccgatgg cagcgatgcc aagcgggctc tagtgagtgt ggagaatgcc aaggttctgg
      901 cctccgttca gggttctcta gacgtaagac ttaagaagtt cagtgacgag aaacagcgac
      961 tgctgtccga ggtgcaaaag ctgcacgagc agctggatga gtataagagc gatgggatga
     1021 ctggacgtcg cagtctttcg caaggttcct ttggtgatga gaatgactac gaggcccaac
     1081 gggaatcaaa caaaatcatt tcagaccata aatataagct gcagaaggcg gagcaggaga
     1141 tcgccaacct gcagtcgagc ttagcccgtt cagagactca ggtgattcgg tacaagagca
     1201 ctgcggaagc cgccgaaaag gcggaggcag agctgaaggt cgagcgccgc aagcttcagc
     1261 gcgagcatcg ggaaattttg gaaaaactgg aagaggccga aacgtcaaac aaccacttgc
     1321 tgaagcggct cgacaagctt aaaaacgcta agagtgccat tctaaaggac ttatgatcga
     1381 agatgggagg agctgcaatc tcgccaacca ttgaaaggtc gcatccgatg acatagaaga
     1441 cagaaaacag tacgacatca tcaacataca aatgctgcaa ttaaaatagc acttcggtag
     1501 caacttaatc ggtcttagtg gtagcaaaac gatcattttt gaaggataat ccaaaatact
     1561 ctaccttaaa aacatatatt taaattaaaa tataaactaa caggataata attaacataa
     1621 ataatgtcta tatgtatatg taaagcgcaa aatataagta acaattcaat tggttcggca
     1681 gtgtgtgtgt gtgaaatcat tttttttaca aaaacgcgta gaaaatccca ttattgatcg
     1741 aattatttgt attctattgc tagaaatccg tttcatcggc cgcgatctcc caacggaacg
     1801 cccaataaat gccattttta agaaaagtta a