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LOCUS XM_017140662 4392 bp mRNA linear INV 09-DEC-2024 subunit (AP-1gamma), transcript variant X1, mRNA. ACCESSION XM_017140662 VERSION XM_017140662.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140662.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4392 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4392 /gene="AP-1gamma" /note="adaptor protein complex 1, gamma subunit; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056726" CDS 197..3136 /gene="AP-1gamma" /codon_start=1 /product="AP-1 complex subunit gamma-1 isoform X1" /protein_id="XP_016996151.2" /db_xref="GeneID:108056726" /translation="MYPYYEQDWSVLPPENNRRFNPAFNMATIRQAFTEAVERVRMPT PTRLRDLIRQIRAARTAAEERAVVNKECAYIRSTFREEDSVWRCRNIAKLLYIHMLGY PAHFGQLECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKNDLNSSTQFVV GLALCTLGAIASPEMARDLASEVERLMKSPNTYIRKKATLCAFRVIRRVPELMEIFLP ATRSLLSEKNHGILITGVTLITEMCENSSDTLMHFKKDSGNREIVPNLVRILKNLILG GYSPEHDVSGVSDPFLQVKILRLLRILGHNDPDASEAMNDILAQVATNTETSKNVGNT ILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVHADTSAVQR HRTTILECLKDPDVSIRRRAMELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSG MILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPLPEQTYITNRFW ESLQVANHCEDKQPLLQVAVWAIGEYGDLFMYGANEDEFERPTESDLIAVYHKFLTSA QVSTTSKQYALVSLAKLSTRLQQCVEEIQALITSFGSHLNVDLQQRGVEFTQLFGHYK HLRPPLLEKMPAMQISRISSQNGESGGGSFDDNSPDVIENGESGGGGHSLIESNMNTL GDNTNILLDLLGSTDLSAGGAGDLVAATDLSNAVHKKNSRNANDVVVAPVSNNQDLLD LLDLDLTTPSSTTTTTAGAPTGVGGGGGGILALAGDNNQSSAANMNNMLGGLDLGGFG SGLDGSASIATNGNDLASMLGGLGGAAPPLAAPAAPVGNLIVDGHGGSLLGDLNPNNV EVPPQGPRLTALDRDGLLVQLVSVRGSDCMRIYMTTTNSSDNTLEQYLLKAAVQKSFQ LQMLTPSGSVLPPGGVITQEMRVVATSNATLRMRLRIQYVLDGQQQVEQTEVSGFPEQ QPAVAEE" misc_feature 398..2068 /gene="AP-1gamma" /note="Adaptin N terminal region; Region: Adaptin_N; pfam01602" /db_xref="CDD:396262" misc_feature 2795..3106 /gene="AP-1gamma" /note="Adaptin C-terminal domain; Region: Alpha_adaptinC2; smart00809" /db_xref="CDD:197886" polyA_site 4392 /gene="AP-1gamma" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgcaggagtt tccaccgctc gggctggaaa tgatcgccta gctacagcta gagagtcgga 61 aaagcagagc gttacctgct aactattagt gtacattaga taaggcctat gtggagcact 121 cggcgcttat cgtatcgctg acattcccct tccagtcggt ttagttccga gctccagtga 181 gaagtgagag gcgaccatgt atccgtatta cgagcaggac tggagtgttc tgccgccgga 241 gaacaatcgc agattcaatc cagccttcaa tatggccacc atacggcagg cgttcacaga 301 ggcggtggag agagtcagaa tgcctacgcc cacacgcctg cgcgacctca tccgacagat 361 tcgcgccgcc agaaccgccg ccgaggagcg ggcggtggtc aacaaagagt gcgcctacat 421 acggagcact ttccgcgagg aggactccgt ctggcgctgt cgcaacattg ccaagctgct 481 gtacatacac atgctcggct atccggctca ctttggccaa ctggagtgcc ttaagctgac 541 ggccagcacg cggttcacag acaagcggat cggatacctg ggcgccatgc tgctgctgga 601 tgagcggcag gatgtccacc tgctcatcac caactgcttg aagaacgact tgaacagctc 661 gacgcagttc gtcgtgggcc tggccctgtg cactctgggc gcgatcgcct caccggaaat 721 ggcccgggat ctggccagcg aggtggagcg tctgatgaag tccccgaaca cgtacatccg 781 caagaaggcg acgctgtgcg cctttcgcgt catccgccgt gtgcccgagc tgatggagat 841 cttcttgccg gccacgcgtt ccctgctcag cgagaagaat catggcattt tgatcactgg 901 cgttacgctc atcacggaga tgtgcgagaa cagctcggac acgctgatgc atttcaagaa 961 ggatagcgga aatcgagaga ttgtgccgaa tctggtgcgc atcctgaaga acctgatcct 1021 gggcggctat tcgccggagc acgacgtcag cggggtgagc gatcccttcc tgcaggtgaa 1081 gatcctgcgg ctgctgcgca ttctgggcca caacgatccg gacgcctcgg aagcgatgaa 1141 cgacatcctg gcccaggtgg ccaccaacac ggagacgagc aagaatgtgg gcaacacgat 1201 tctctacgag acggtgcttt ctattatgga tatacgctcg gagggtggac tgcgcgtgct 1261 ggccgtcaat atcctgggac gattcctgct caactcggac aagaacatac ggtatgtggc 1321 gctgaacacg ctgctgcgaa ccgtccacgc ggacacgtcg gcggtgcagc ggcatcgcac 1381 caccattctg gagtgcctca aggatcccga tgtctccata cgccggcgtg ccatggagct 1441 ctcgttcgcg ctgatcaatg cacaaaacat acgtacaatg accaaggagc tgctgctctt 1501 cctcgagaag gccgacgcgg agttcaaggc gcagtgcagc tcgggcatga tcctggccgc 1561 cgaacgctat tcgcccacca ctcgctggca tttggatacg cagttgagcg tccttattgc 1621 ggccgggaat tatgtgcgcg acgacgtcgt ctcctccacc atccagctgg tgtccagcag 1681 tcccctcccg gagcagacgt acatcacgaa ccgtttctgg gagtcgctgc aggtggccaa 1741 tcattgcgag gacaagcagc cgctcctcca ggtcgccgtc tgggccatag gcgagtacgg 1801 cgatctcttt atgtacggcg ccaacgagga tgagtttgaa cggcccactg agagcgatct 1861 gatcgctgtg tatcataagt ttttaacctc tgctcaagtc tcgaccacaa gcaagcaata 1921 tgctctggtc tccctagcca agctaagcac acgtctgcag cagtgcgtag aggaaatcca 1981 ggcgctgatc acctcctttg gcagccatct gaatgtcgat ctgcagcagc ggggcgtgga 2041 gttcacgcag ctattcggtc actacaagca tctgcgtccg ccgcttctcg agaagatgcc 2101 ggccatgcag atcagcagga taagctcgca gaacggcgag agcggcggcg gctccttcga 2161 cgacaacagt ccggatgtca ttgaaaatgg tgaaagtggc ggtggcggac actcactaat 2221 cgaaagcaat atgaacactc tgggcgacaa tacgaacatt ctgctggatc tgctgggcag 2281 cacggatctg tcggcgggcg gcgctggcga tttggtggca gccacggatc tctcgaatgc 2341 cgtgcataaa aagaactcgc gcaatgccaa cgatgtggtg gtggcgcccg tttccaacaa 2401 tcaggatctg ttggatctgc tcgacttgga tctgaccacg ccctcgtcca cgacgacgac 2461 gacggctggt gcgccaacgg gcgtgggagg aggaggaggc ggcattctgg ccttggccgg 2521 tgataataat cagagcagtg cagcgaacat gaataacatg ctgggtggcc tggacctggg 2581 tggctttgga tccggtctgg atggctcggc gagcatagcc acgaacggca acgatttggc 2641 cagcatgctg ggcggattgg gcggagctgc tccacccttg gcggctccag ctgctcccgt 2701 gggcaacctc atcgtcgatg gccatggcgg cagcttgctg ggcgatttga atcccaacaa 2761 tgtagaagtg cctccacagg gtcccaggct gactgcgctg gacagggatg gattgctggt 2821 gcaactagtt tcggtcaggg gcagcgactg catgcgcatc tatatgacga ccacgaatag 2881 ctcagacaat acgctggagc agtacttgct aaaggcggcg gttcagaaga gtttccagct 2941 gcaaatgctg acgccctccg gttcggtgct gcctcctgga ggagtgatca cgcaggagat 3001 gcgggtggtg gccacgtcga atgcgacact gaggatgcgg ctgcgcatcc agtacgtgct 3061 cgatggccag cagcaggtag agcagacgga ggtcagcgga ttccccgagc aacagccggc 3121 ggtggccgag gagtagagcc acggcaactg tattaaagca aaccagatta gcctaatatc 3181 ggaaataaat caacacgggc aacttgcgca gcagcagcaa cactaaaaaa cacacacaca 3241 cactgtggtt gtcacacatt tattgtaaaa taagttatca cacacagtaa aacagaacac 3301 acgcaatcgc aatcgcagtc gcagtcgcat tcgcatctag atcagagcat tttctcggtg 3361 gcagagaaat caagggatat acccaagcag ttaacttata tattttgtct aatttatatc 3421 tctatactta tatttacaaa aacacactac ttgtcaaatc aaaactcttt acgtttatct 3481 tgttttatta taaataattt tctcattcta aatggtgtgt aaacttttgt gtgtaaaaga 3541 caactttcag ttttaattta agacaataaa agtcaaatcc ccagatatcc cccccattaa 3601 agaatggcaa ctaacaaaga aagaacagaa atgtattaaa accgattgtg aaattatgta 3661 gcaaaagcat ttaaaaaagc ttagcatttt aaaggaatcg aaacgatgga gcgagttgaa 3721 tgtttgaggc catttcgcgc agtttatttg ttatttctat atgtaatgag tgtttgtttt 3781 ctgttttccc tgagtcctga gtcctattga gtcttactga tcctgatcct gatattcctt 3841 cttatttacc ccgccaaaca cattcatatt atatataaat atatacagaa cagacacaca 3901 cacgaccacg cggatatata ttatattatg tattgttatt tcctgtgcgc acgtacttaa 3961 agcggagatc agcagcaacc agagaaagtc taaagaataa agagaaaaac acaaaccaga 4021 tagcactgtg gaaaactaga taatatctat gataaatgat aaatataatt gtaacggagg 4081 aggacgcagc ttagaactat ataaactgat tagttgccgt cgccgatgat gatcaggatg 4141 atcagatgat gatgataagg ggcatcgaga agcaaagaaa atccattaac tattattatt 4201 attattatga ttataaatga attacgcagc tgtatgagaa tgaaagagag agagataaga 4261 aaataataac attaacatat tgtacaatat attattattt ttgtattact atcatttcct 4321 tttatatcta cttatattcc acaaaccttt tgagccgaaa taaacaaacg atttcgtttt 4381 atcgaaggac aa