PREDICTED: Drosophila takahashii E3 ubiquitin ligase Rnf121

LOCUS       XM_017140637            1607 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108056713), transcript variant X1, mRNA.
ACCESSION   XM_017140637
VERSION     XM_017140637.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140637.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1607
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1607
                     /gene="LOC108056713"
                     /note="E3 ubiquitin ligase Rnf121; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     Proteins"
                     /db_xref="GeneID:108056713"
     CDS             179..1144
                     /gene="LOC108056713"
                     /codon_start=1
                     /product="E3 ubiquitin ligase Rnf121"
                     /protein_id="XP_016996126.1"
                     /db_xref="GeneID:108056713"
                     /translation="MHQQHMDLHAPVDLNKSLDEMTPEERMRAEHQLMVEKHRGHDAM
                     HSEMVIILFVTLVIAQIILVEWKKRHYSSYAFVTLLAMWLIPLIISCSFGWLRFILIW
                     LVFTCITALVMRRAISKPIQGTTPRLVYKWFYFIYKLSYGLGLVGYLVIMAAFLGMNY
                     LFSQPPNTWMDVGLMFCFYGLYIGVLGRDISEICSDKMAAAIGYYTPQGIPTRHLDQN
                     VCAVCGNQLLVSEKEEGVIENTYKLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLQ
                     KMFRNPWEKPHVLYGRLLDWIRWLVAWQPLIFFIVQGINWMLGLE"
     misc_feature    830..994
                     /gene="LOC108056713"
                     /note="RING finger, H2 subclass, found in RING finger
                     proteins RNF121, RNF175 and similar proteins; Region:
                     RING-H2_RNF121-like; cd16475"
                     /db_xref="CDD:438138"
     polyA_site      1607
                     /gene="LOC108056713"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acggcagctg gacacgcaca caggcacaac atgtaattat ttgttttcgt ttcgagaatt
       61 tcagaggtaa aaaccgaacg cactacgtgg tgacaagatt acccagcgac gcagacgacg
      121 agtgggactg tccggcggat tgggggcagc gggaaacggc ggttacaacg gcaacaagat
      181 gcaccagcag cacatggacc tccatgcgcc cgtggacctg aacaagtccc tggacgagat
      241 gacgccggag gagcggatga gagcggagca ccaactgatg gtggagaagc atcgcggcca
      301 cgacgccatg cactccgaaa tggtcatcat cctgttcgtc accctggtca tcgcccagat
      361 catcctggtc gagtggaaga agcgccacta cagctcctac gccttcgtca ccctgctggc
      421 catgtggctc atcccgctga tcatctcctg cagcttcggc tggctgcgct tcatcctcat
      481 ctggctggtc ttcacctgca tcacggccct ggtgatgcgt cgggccatca gcaagcccat
      541 ccagggcaca acgcccaggc tggtctacaa gtggttctac ttcatctaca aactgagcta
      601 tgggctcggt ctggtgggct acctggtgat catggccgcc ttcctgggca tgaactacct
      661 gttctcgcag ccaccgaaca cctggatgga cgtgggcctg atgttctgct tctacgggct
      721 gtatatcggt gttctagggc gggatatatc cgagatatgt tcggataaga tggcggcagc
      781 cataggctac tacacaccgc agggcatccc cacgcggcat ctggatcaga atgtctgcgc
      841 cgtttgcggc aatcagctgc tggtctccga aaaggaggag ggcgtcatcg agaacaccta
      901 caagctgtcc tgcaaccatg tgttccacga gttctgcata cgcggctggt gcattgtggg
      961 caagaagcag acgtgtccct actgcaagga gaaggtcgat ctgcagaaga tgttccgcaa
     1021 tccctgggag aagccgcatg tgctgtacgg acgcctgctg gactggatcc gctggctggt
     1081 ggcctggcag ccgctcatct tcttcatagt acaaggcatc aactggatgc tgggactgga
     1141 ataggtcctt cgctagcttt cctcggcgtc tagtcaagca cacacacttt ggatcaagtc
     1201 ctgcacatgc aacaccacac agaagacacg acgacagacg acagaccaat tggaggggtg
     1261 gcgagtcacc aggagcacca ctagcaccat cattcccccg ccgctcccct ccagaactct
     1321 ccatccaacc gttttccggg tttccgtttc cgtttccagt tctgtgtgtg ttttgctctt
     1381 cgggcaccca acttttccat tcgttcagtc tctaatcgaa acgtaaatgc aatttcggat
     1441 atatgcatct atatctatat attatagcta tgtatttatg tacatatgtg tgcctgtgtg
     1501 tatgtctcct aggtattatt gccgatttta ttttcttgat tctattaatt gcactggagc
     1561 tggttaggaa taaacatata ccaaaaaata catctattga taaagta