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LOCUS XM_017140619 3483 bp mRNA linear INV 09-DEC-2024 transcript variant X6, mRNA. ACCESSION XM_017140619 VERSION XM_017140619.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140619.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3483 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3483 /gene="shi" /note="dynamin-1 shibire; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 37 Proteins" /db_xref="GeneID:108056704" CDS 520..3153 /gene="shi" /codon_start=1 /product="dynamin isoform X2" /protein_id="XP_016996108.1" /db_xref="GeneID:108056704" /translation="MDNLITIVNKLQDAFTSLGVHMQLDLPQIAVVGGQSAGKSSVLE NFVGKDFLPRGSGIVTRRPLILQLINGVTEYGEFLHIKGKKFSSFDEIRKEIEDETDR VTGSNKGISNIPINLRVYSPHVLNLTLIDLPGLTKVAIGDQPVDIEQQIKQMIFQFIR KETCLILAVTPANTDLANSDALKLAKEVDPQGVRTIGVITKLDLMDEGTDARDILENK LLPLRRGYIGVVNRSQKDIEGRKDIHQALAAERKFFLSHPSYRHMADRLGTPYLQRVL NQQLTNHIRDTLPGLRDKLQKQMLTLEKEVEEFKHFQPGDASIKTKAMLQMIQQLQSD FERTIEGSGSALVNTNELSGGAKINRIFHERLRFEIVKMACDEKELRREISFAIRNIH GIRVGLFTPDMAFEAIVKRQIALLKEPVIKCVDLVVQELSVVVRMCTSKMSRYPRLRE ETERIITTHVRQREHSCKEQILLLIDFELAYMNTNHEDFIGFANAQNKSENANKTGTR QLGNQVIRKGHMVIQNLGIMKGGSRPYWFVLTSESISWYKDEDEKEKKFMLPLDGLKL RDIEQGFMSMSRRVTFALFSPDGRNVYKDYKQLELSCETVEDVESWKASFLRAGVYPE KQETQENGDESASEESSTDPQLERQVETIRNLVDSYMKIVTKTTRDMVPKAIMMLIIN NAKDFINGELLAHLYASGDQSQMMEESAESATRREEMLRMYRACKDALQIIGDVSMAT VSSPLPPPVKNDWLPSGLDNPRLSPPSPGGARGKPGPPAQSALGGRNPPLPPATGRPA PAIPNRPGGGAPPLPGGRPGGALPPPMLPSRVTGSVGGAIVQQSGANRYVPESMRGQV NQAVGQAAINELSHAFSSRFK" misc_feature 520..1239 /gene="shi" /note="Dynamin, GTPase; Region: DYNc; smart00053" /db_xref="CDD:197491" misc_feature 616..639 /gene="shi" /note="G1 box; other site" /db_xref="CDD:206738" misc_feature order(619..621,625..642,679..684,697..699,910..912, 1120..1122,1126..1131,1207..1221,1228..1230) /gene="shi" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206738" misc_feature order(622..627,922..924,961..963,1036..1038,1042..1044, 1048..1059,1063..1068,1129..1131,1135..1146,1216..1224) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:206738" misc_feature 697..699 /gene="shi" /note="G2 box; other site" /db_xref="CDD:206738" misc_feature 709..717 /gene="shi" /note="Switch I region; other site" /db_xref="CDD:206738" misc_feature 910..921 /gene="shi" /note="G3 box; other site" /db_xref="CDD:206738" misc_feature order(916..921,1009..1014) /gene="shi" /note="Switch II region; other site" /db_xref="CDD:206738" misc_feature 1117..1128 /gene="shi" /note="G4 box; other site" /db_xref="CDD:206738" misc_feature 1147..2013 /gene="shi" /note="Dynamin central region; Region: Dynamin_M; pfam01031" /db_xref="CDD:460033" misc_feature 1207..1215 /gene="shi" /note="G5 box; other site" /db_xref="CDD:206738" misc_feature 2053..2394 /gene="shi" /note="Dynamin pleckstrin homology (PH) domain; Region: PH_dynamin; cd01256" /db_xref="CDD:269958" misc_feature order(2059..2061,2065..2070,2074..2076,2125..2127, 2338..2343,2350..2352,2359..2364,2371..2373) /gene="shi" /note="homodimer interface [polypeptide binding]; other site" /db_xref="CDD:269958" misc_feature 2452..2727 /gene="shi" /note="Dynamin GTPase effector domain; Region: GED; smart00302" /db_xref="CDD:128597" misc_feature 2635..>3027 /gene="shi" /note="Fibronectin-attachment protein (FAP); Region: FAP; pfam07174" /db_xref="CDD:429334" polyA_site 3483 /gene="shi" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaattcatt gaaacagttt ggagtggtgg agtgtggtga tagtcgtcag tttgcacaat 61 aagaatattt gctaaagaca gccccaaatt gttaatgtta atctagctgt gcgtggggcg 121 atggacatga catgaacaca aacactacac tgttacgcct gagactgaga accgagaagc 181 gaaggaggat tggaaaagtc gatgataatt cccatttcct tggcagtata tatacaaatt 241 ctttttgtgt aaatgtcgat aaacagtttt gcttgcaacc cgacaacctt tagatgtcgc 301 caccgccact cgcgagttct cagagttcca ttataatcag acactcggca tgaaataaaa 361 caaaagtaat tgcagaggag tgcagtgcag aaaacccaga gatcagagat cagaacacaa 421 gccacccggg gacgagtcag agtcaggatc gcagttcgat ccgagagcct aatctaatcc 481 gattgcgaga gaccccatcc acatccagaa cttgccgcaa tggataacct aatcacgatt 541 gtaaacaagc tgcaggatgc gttcacatcg ctcggcgtcc atatgcagtt ggatctgccg 601 cagatcgcgg tggtcggtgg ccaatcagct ggcaagagtt ctgttctgga gaacttcgtt 661 ggcaaagatt tcttgcctcg tggctctggt atcgtgactc gaagaccttt aatattgcaa 721 ctgatcaatg gagtcaccga atacggagag ttccttcaca ttaaaggcaa aaagttctcg 781 agcttcgatg agatcagaaa agaaatcgaa gatgagacgg atcgtgtgac cggcagcaac 841 aaaggcattt caaacattcc aattaatttg cgcgtctact cgccgcacgt actcaatcta 901 actctgatcg atttgccggg cctgacgaag gtggcaattg gcgatcagcc ggtggacatt 961 gagcagcaaa ttaagcagat gatattccaa tttattcgca aagagacttg cttgattctg 1021 gccgttacgc cggccaacac ggatctggcc aactcggatg ctctgaagct ggccaaggag 1081 gtggatccgc agggtgtgcg caccatcggc gtgataacca agctggatct gatggacgag 1141 ggcaccgatg cccgggacat tctggagaac aagctgctac cgctgcggcg gggctatatt 1201 ggtgtggtca atcgatcgca gaaggacatc gaggggcgca aggacatcca ccaggcgctc 1261 gccgccgagc gcaagttctt cttgagccac ccctcgtacc gtcacatggc cgatcgtctc 1321 ggaaccccct acttgcagcg ggtcctcaat cagcagctca ccaaccacat tcgggacacg 1381 ttgcccggcc tgcgggacaa gttgcagaag cagatgctca ctttggagaa ggaggtggag 1441 gagttcaagc acttccagcc gggcgatgcc agcatcaaga caaaggctat gctccaaatg 1501 attcagcagc tgcagtcgga ctttgagcga accatcgagg gcagcggctc ggccttggtc 1561 aatacaaatg agctctcggg cggcgccaag atcaatcgca ttttccacga acgtctgcgc 1621 ttcgagatcg tcaagatggc ctgcgacgag aaggaactgc ggcgagagat ctcattcgct 1681 atccggaaca ttcacggcat tcgcgtgggc ctcttcacac ccgacatggc gttcgaggcg 1741 attgtcaaga ggcagatagc gctgctcaag gagccggtca tcaagtgtgt ggatctagtc 1801 gtacaggaac tttctgtggt tgtgcgcatg tgcacatcta aaatgagtcg atacccacgt 1861 ctgcgcgagg agaccgaacg cattatcacc acgcatgttc gccaacgcga gcacagctgc 1921 aaggaacaga tcctcctgct gattgacttt gagctggcct acatgaacac caaccatgag 1981 gacttcattg gtttcgccaa cgctcaaaat aaatctgaaa atgccaataa aactggcacg 2041 cgtcagcttg gcaaccaagt tatacgtaag gggcacatgg tcatacagaa ccttggtatc 2101 atgaaaggtg gatcgcgtcc ctattggttt gtgttgactt ccgagagtat ctcctggtac 2161 aaggacgagg atgagaagga gaagaagttc atgctgccgt tggatggttt aaaattgcgg 2221 gatattgaac agggatttat gtcaatgtct agacgtgtta catttgcttt atttagtccc 2281 gatggacgta atgtttataa ggactacaaa caactggagc tgtcgtgcga gaccgtggag 2341 gatgtggagt cctggaaagc ctccttcctg cgggctggtg tctatcccga gaagcaggag 2401 acccaggaga acggggatga gtcggccagc gaggagagtt ccaccgatcc acagttggag 2461 cggcaggttg agaccatccg caatctggtg gactcgtaca tgaagatcgt gaccaagacc 2521 acgcgagaca tggtgcccaa ggcgattatg atgctaataa taaacaacgc caaggacttt 2581 atcaacgggg agcttctggc acatctctat gcgtctggtg atcagtccca gatgatggaa 2641 gagtccgccg agtcggccac gcgacgagag gagatgctgc gtatgtaccg tgcttgcaag 2701 gatgctctgc agatcatagg cgacgtatcc atggccactg tgtcctcgcc attgcctccg 2761 ccggttaaga acgattggct acccagtggc ttggacaacc cacgtctctc ccctccgagt 2821 ccgggtggag cccgaggtaa accaggacct cccgcacaga gcgccttagg tggacggaac 2881 ccaccattgc caccagcaac aggccgcccg gctccagcga ttccgaatcg cccaggaggt 2941 ggggcaccac cgctacccgg cggtcgtcct ggaggagctc tgcccccacc aatgttacca 3001 tcccgtgtca ctggatccgt cggcggtgcc attgtccagc agtcgggggc caatcgatat 3061 gttccggaga gtatgcgtgg acaggttaac caggccgttg gccaggcggc catcaatgaa 3121 ctatcccacg cctttagttc ccgattcaag taatgcaagc aaaattaagc acaatatgca 3181 gagtatgcaa attatttacc gacaaaatag caaacactta cgcgtcatca tatcaccatc 3241 caccattcaa aatcaaagaa gtataacaca aatcaaagct ttcaagatgt ctgttggttt 3301 taaatctatg gaaaaattca gcggagtgtc acaagatcct tggatatttc ccacatacaa 3361 attattgctt tcgaattgat ttcatcatgg aacatttact tttaaaagta tatttaaacg 3421 tgaaataaat aaaattattt tccaaaatga gtatttatga ataaatgtat gtatgtaaag 3481 cga