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LOCUS XM_017140586 5853 bp mRNA linear INV 09-DEC-2024 raskol (raskol), transcript variant X12, mRNA. ACCESSION XM_017140586 VERSION XM_017140586.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140586.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5853 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5853 /gene="raskol" /note="Ras GTPase-activating protein raskol; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056689" CDS 932..5476 /gene="raskol" /codon_start=1 /product="ras GTPase-activating protein raskol isoform X12" /protein_id="XP_016996075.2" /db_xref="GeneID:108056689" /translation="MGRRTYLSRASAISYPSRIEGWLDVCETEGELTRLIKTLPWGPL YCVLQQDDQTFTAYCSEEISRGDVCYEDIPRVRLDRVRRPAKAFWDGPPTLAEENEDS DSCVGGEMSGINDIVLNTTLYSELDTSYEKACRRGSAPTTPILGSKQHQSENNATSRF TNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVG VAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDN SLKMWVYEAKNLPPKKRYFCELQLDKTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVI TVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRVPCEQWYPILSDKAGDSLGRTSGGG GSSGSKDKEQLPTLRIKCRFQSTDILPINVYANFLAYLKENYKRVCETLEPVIGVKAK EDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGE QYLQDTLSAPINELIQSERDCEVDPTKASGSSAGSLQRQQAALRGAVRGAWQCIFESH KHFPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSLFNITSELPS ARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHP APDSILDWAGYIDQGKQLSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGN LGTALPGGYLPASSSSTHSIASENQENRQPANPDQLLLQQQQSQLAQPQHAIVSKPLS AERGIMRGVLTPNSLEKNIFRYNDPTVNGVLQQQQLQQQQMQQQQLQQHPHHHSQTSI AGNQYLSSPGGLQHAQSQTSMASSSLNGSSSNLLHQQQQQHVHPMQHPHYCPPAPQTS ASSTMERMNPYPYLAHNGNEYEASTPSSTRSRTLPRNGNGSGHPMGNNNQSGSYDDMH GEFQIQISGLDTSSAFVCKSPTPMMKSSLVGGASQAGGGARGHHKLNLGIPDHSGVYV RGGCLNPNSNMPKNLEDLDDLFKYAEEHDVAEHHQHSQQNHQQNHQQQQSHLKPNPGL PPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPVESQLKAAMGSHNAPLAFKNPSYQL QPSQAGRSSAPSNPQQQFGSRLKPIGGGLVAARAAFLNSGGNLETAAATLTPSSSDEQ LSADNYFSYAAAAAAGAGLSGKMEAQRSLSGGSSSSTSASAASTSNLGKNGGGSTAYG RLNGPLKREDVYGAAAGHHQQQQQQQLQQQRDRERDQELKQYAGSVAGSVGSATSAAQ RRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLRSSGGSGEGKGNGNGNGYDQNGEI QLLQQTLDTLCHTLDRDEAELRDSSDELFGIQRPAGSAGSNGSNNLSLQSESTMRSII DRLITMEEELRREQLKMSLALSHKQRVIEEQGQQIAALDAANSRLLSALTALRQRYET QQQQQQQQQHQAPPKTQKPQ" misc_feature 1409..1753 /gene="raskol" /note="Synaptic Ras-GTPase activating protein family Pleckstrin homology (PH) domain; Region: PH_RasSynGAP-like; cd13262" /db_xref="CDD:270082" misc_feature 1727..2191 /gene="raskol" /note="C2 domain present in Ras GTPase activating protein (GAP) family; Region: C2_SynGAP_like; cd04013" /db_xref="CDD:175980" misc_feature 2162..3145 /gene="raskol" /note="Ras-GTPase Activating Domain of DAB2IP and similar proteins; Region: RasGAP_DAB2IP; cd05136" /db_xref="CDD:213338" misc_feature order(2279..2281,2387..2389,2393..2395,2399..2404, 2408..2410,2417..2419,2429..2431,2714..2716,2738..2743, 2750..2755,2762..2764,2825..2827,2834..2839,2846..2848, 2858..2860,2864..2866,2879..2884) /gene="raskol" /note="putative RAS interface [polypeptide binding]; other site" /db_xref="CDD:213338" misc_feature <5216..5407 /gene="raskol" /note="Domain of unknown function (DUF3498); Region: DUF3498; pfam12004" /db_xref="CDD:463427" ORIGIN 1 ttgttgtttt tttgacaacc gcggtcgacg tcacgtcgcg gctctccgct cttccagccg 61 attttgaaaa ccgaagcgaa accgttgtcg atccggatcc gaaatccgaa gatagctttt 121 attgtgtctt ttttttcgag tgttttgtgg gagagcgtcc cctccaaaaa aacaaggggc 181 agcaacaaca aggttacaac ttctggaccg cacacacaca cacacaatta aagccgccga 241 aacatgcaca tgcttgattt gttgttggcg gagtcgtgat ttaaaaataa tacagtacac 301 caaaataaat tacacacaca cacacgtata caggtgcaaa ataaagtttc tggtttctgg 361 tgataacaac aacagaaaca acagtaaata aggtggagag ccaaaaaaaa cataatccaa 421 aaaaagaggc accgctaaaa tgccactcag ctgttacgaa aaaaacagca aaaaacacta 481 aaaacaccga acaccgaaaa tcaggtggag agggagacgg agaggaaaga tggagattaa 541 aacaaagagc ggaattggat ttggaatcgt taaaaatcaa atgaaaacaa caacaacaac 601 aacctgctct tgaaatcgta acaaatctcg gtcttttatt tgctttgctt taatcttttg 661 ttttacaata accaataacc cccaaaaagc gccataaggc acaagtgcaa taaaaacaaa 721 gcaacaacag caagaacaaa caaaatcaat attcaaatta agcagcaact aaaacaacaa 781 caacaactca acgagtcgat aagctaaacg ataagtgaga ggatacggat acggatgcgg 841 tagagagcca gcccagcgaa agagagagcg ccggagagag gagagagaga gcacagcatc 901 cacctaaacc aaaattacca cccccaacaa aatgggacgt cgaacttatt taagccgggc 961 ctcggcgatt tcctacccca gcagaatcga aggatggctg gatgtctgtg aaaccgaggg 1021 agaactaact cgcctgatca agacgcttcc ttggggtccc ttatattgcg tccttcagca 1081 ggacgatcag acatttaccg cgtattgcag cgaggagata tcgcggggtg atgtgtgcta 1141 cgaggacatt ccacgggtcc gattggatcg cgttcgtcgg cccgcaaagg ctttttggga 1201 cggaccgccg accttggccg aggaaaatga ggactccgat tcttgtgttg gcggcgagat 1261 gagcggcatc aatgacatcg tgctgaatac gacgctttac agtgaactag atacttccta 1321 tgagaaggcg tgccgccgtg gatcagcgcc cactacgccg attttgggca gcaaacagca 1381 ccagtcggag aacaatgcca cctcgcgatt caccaacttc ttttccaaaa aatccaatcc 1441 cctgaagcgg accaagtcgg tgaccaaatt ggagcgtacc aagcgcggat ccggcggact 1501 gaggggctcc cgctcgcacg agagtctgct gtccagtcac gccgtcatgt cgaccataga 1561 tctctcctgc actggggcgg tgggcgtggc gccggtgcac cagtcagtcc tcgggcggcg 1621 tcactgcttt caggtgcgcg gcgggccgcg tggcgagcgc tactactcgt gcggatcgcg 1681 ccaggagcgc gatctctgga tctactcgct gcgcaagtcg atagccccga atgccgagca 1741 cactcgccgc acggacaact cgctgaagat gtgggtctac gaggcgaaga atctgccgcc 1801 gaagaagcgt tacttttgcg aactgcagct ggacaaaacg ctctacgggc ggacgtcggt 1861 gaagctgcag acggatctgc tcttctgggg cgagcatttc gatttccccg acatcccaga 1921 gatcaatgtg atcacggtga acgtttttcg ggaggtggac aaaaagaaga agcgggacaa 1981 gtatcagttt gtgggttcag tgaagatacc cgttcacgat gtgacctcgc gagtgccctg 2041 cgagcaatgg tatcccatac tcagcgacaa ggcgggcgat agtctgggca gaacttctgg 2101 aggtggtgga tcgagtggtt cgaaggacaa ggagcaactg cccacgctga ggatcaagtg 2161 ccgtttccag agcaccgaca tcctgcccat caatgtgtat gccaactttt tggcctatct 2221 caaggagaac tacaagagag tttgcgaaac tctagagccc gtgattggtg tgaaagccaa 2281 ggaggatata ggacaggcac tggttctcct catgcatgcc cagggattag ccggagcctt 2341 tctcaccgat gtggttgccc tggatttact acgcgtcggt gatcagcgac tgacttttag 2401 gggcaactcg ctggccacca agagcatgga ggcgtttctc aagctcaccg gcgagcagta 2461 tctgcaggat accctctcgg cgccaattaa cgaactcatc caatcggaaa gggattgcga 2521 ggtggatccc acgaaggcga gcggttcgtc ggcgggttca ctgcagcgtc agcaggccgc 2581 tttgcgtgga gcggtgcgag gggcgtggca gtgcatcttc gagtcgcaca agcattttcc 2641 cgcccagctg cgtaattgtt ttgccacctt ccgggagcgc ctgcaacaat tgggccgcca 2701 ggatatggcc gacaacctga tctcggccag catctttctg cgtttcctgt gccccgccat 2761 cctgtcgccg tcgcttttta atatcaccag cgaattgccc tccgcaaggg ccactcgcaa 2821 tctcactttg gtggccaaga ccctgcaaac gttggccaat ttcacgaggt ttcagggcaa 2881 ggagaacttt atggagttcc tgaatgattt cctcgaacag gaggccgctc gcatgcagca 2941 gtttctggag attatatcga caaggcccga gcatcctgct cccgattcga tactcgattg 3001 ggcggggtac attgatcagg gcaagcagct ctccattttg cacagcctgc tcagcgagag 3061 tctggccaag ctgccggagg ccaggcagca cgagttggat ccactgcagc acattctcga 3121 cgagattagc cgggccaagg agcatgggaa tctgggaaca gctctgcctg gaggatatct 3181 gccggcctcc tcctcgtcga cgcactcgat agccagcgag aatcaggaga atcgacagcc 3241 ggccaatccg gatcagttgc tgttgcagca gcagcaaagt cagctggccc agccgcagca 3301 tgcgattgtc agcaagcctc tgtcggcgga gaggggcatt atgcggggag ttctgacccc 3361 gaattcttta gagaagaaca tctttcggta caatgatccc acggttaatg gggtattgca 3421 acagcagcag ttgcaacagc agcagatgca gcaacagcag ttgcagcagc atccccatca 3481 tcattcacaa acctccattg cgggaaacca atacctaagt tcgccgggcg gcctgcagca 3541 tgcccaatcg cagacctcga tggcctcctc ctcgctcaac ggcagcagca gcaatttgtt 3601 gcatcaacag caacagcaac atgtccaccc catgcagcat ccacattact gcccgccggc 3661 gccgcagacg agtgcctcca gcaccatgga gcgaatgaat ccgtatcctt atttagcgca 3721 taatggcaac gagtacgagg ccagcacgcc atcgagcact cgcagcagga cactgccacg 3781 aaatggaaat ggaagtggtc atcccatggg caataataac cagagcggaa gctacgacga 3841 catgcacggc gagttccaga tacagatttc cggattggat acgagcagtg cttttgtttg 3901 caagtcaccc acgcccatga tgaagtccag tttggttgga ggagcaagtc aggctggtgg 3961 aggagcaaga ggccaccaca agctgaatct aggaataccc gatcattcgg gggtttatgt 4021 aagaggcggc tgcctgaatc ccaactcgaa tatgcccaag aacctggagg atcttgacga 4081 tctgttcaag tacgccgaag agcacgatgt ggcggagcat caccagcaca gccaacagaa 4141 tcatcagcag aatcaccagc agcagcagag tcacctgaag ccaaatccag gattaccacc 4201 cggcaaggag cagctgtcgg cgaagagcag ccactgcagc tccggctacc agagcatctc 4261 caccaatccc tcgccctcgc agtcctccag tcccgtggag agccagctga aggcagcgat 4321 gggcagtcac aatgcgccgc tggccttcaa gaatccctcc taccagctgc agccgagtca 4381 ggcgggcaga tcatcggcac ctagtaatcc ccagcaacag tttggcagcc gcttaaagcc 4441 cattggaggt ggcctagtgg ccgctagagc agcttttctc aacagcggtg gcaacctgga 4501 gacggcggcg gctacactga cgcccagttc ctcggacgaa cagctctcgg cggataacta 4561 tttcagctat gcagcggcag cggcggccgg agcgggattg tccgggaaga tggaggcaca 4621 gcgctcgctc agcggcggca gcagctcctc cacttcggcc tctgccgcat ccacctcaaa 4681 tctgggcaag aatggcgggg gttcaacggc ctacgggcgg ctaaatggac cgctcaagcg 4741 ggaggatgtc tacggggcag ctgcaggaca ccatcagcag cagcagcagc agcagttgca 4801 acagcagagg gatcgggaac gggatcagga actcaagcag tatgcaggca gtgtggcggg 4861 cagcgtgggc tcagccactt cggcggccca gaggcgactg agcttggact cggcgcgaac 4921 gctttccgac agcagcacgg atacggaagg acactgcaat caattgcagg agggcaagcg 4981 acgcaggcag ttgcgcagca gcggcggcag cggcgaggga aagggcaatg gcaatggcaa 5041 tggctacgac cagaacgggg agatccagct gctgcagcag accctggaca cgctctgcca 5101 cacgctcgac cgcgacgagg ccgagctgcg cgactccagc gacgagctgt tcggaatcca 5161 gcggccagcg ggcagcgccg gcagcaatgg ctcgaacaat ctcagcctgc agtcggagtc 5221 caccatgcgc agcatcatcg acagactcat caccatggag gaggagctgc ggcgcgagca 5281 gctcaagatg tcgctggcgc tgtcgcacaa gcagcgcgtg atcgaggagc agggccagca 5341 gatagcggcc ctggatgcgg ccaacagtcg gctgctgagc gccctgaccg ccctgcgcca 5401 gcggtacgag acgcagcagc agcagcaaca gcagcagcag caccaagcac caccaaagac 5461 ccagaagcca cagtgatgag cggatggggg gcaggaatcg aaggaggagg aggaggagga 5521 ggaggagaag tcctggacaa actgacaagc atgcggacac cgtcttaagg ataccttttt 5581 gtttattttt tttagctatt ttttttcgta tgctacataa attatactac atgtttaata 5641 tatagttaca cataacaata catacattat acataatttc tcaatatatg tttaaaaacc 5701 aaccacaaaa tgtgaaaata atgctaaacg cagctgcaag agcagtgaga taaaaacccc 5761 agaagatcgg agcatggaag tgaagaagaa acaagaacaa gttaagataa tgaataaaat 5821 tataaccaaa gttagacaaa aatgagaaaa agc