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LOCUS XM_017140585 5880 bp mRNA linear INV 09-DEC-2024 raskol (raskol), transcript variant X10, mRNA. ACCESSION XM_017140585 VERSION XM_017140585.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140585.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5880 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5880 /gene="raskol" /note="Ras GTPase-activating protein raskol; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056689" CDS 932..5503 /gene="raskol" /codon_start=1 /product="ras GTPase-activating protein raskol isoform X10" /protein_id="XP_016996074.2" /db_xref="GeneID:108056689" /translation="MGRRTYLSRASAISYPSRIEGWLDVCETEGELTRLIKTLPWGPL YCVLQQDDQTFTAYCSEEISIFPATPNKERGDVCYEDIPRVRLDRVRRPAKAFWDGPP TLAEENEDSDSCVGGEMSGINDIVLNTTLYSELDTSYEKACRRGSAPTTPILGSKQHQ SENNATSRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHESLLSSHAVMSTI DLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPN AEHTRRTDNSLKMWVYEAKNLPPKKRYFCELQLDKTLYGRTSVKLQTDLLFWGEHFDF PDIPEINVITVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRVPCEQWYPILSDKAGD SLGRTSGGGGSSGSKDKEQLPTLRIKCRFQSTDILPINVYANFLAYLKENYKRVCETL EPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSM EAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKASGSSAGSLQRQQAALRGAVRG AWQCIFESHKHFPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSL FNITSELPSARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLE IISTRPEHPAPDSILDWAGYIDQGKQLSILHSLLSESLAKLPEARQHELDPLQHILDE ISRAKEHGNLGTALPGGYLPASSSSTHSIASENQENRQPANPDQLLLQQQQSQLAQPQ HAIVSKPLSAERGIMRGVLTPNSLEKNIFRYNDPTVNGVLQQQQLQQQQMQQQQLQQH PHHHSQTSIAGNQYLSSPGGLQHAQSQTSMASSSLNGSSSNLLHQQQQQHVHPMQHPH YCPPAPQTSASSTMERMNPYPYLAHNGNEYEASTPSSTRSRTLPRNGNGSGHPMGNNN QSGSYDDMHGEFQIQISGLDTSSAFVCKSPTPMMKSSLVGGASQAGGGARGHHKLNLG IPDHSGVYVRGGCLNPNSNMPKNLEDLDDLFKYAEEHDVAEHHQHSQQNHQQNHQQQQ SHLKPNPGLPPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPVESQLKAAMGSHNAPL AFKNPSYQLQPSQAGRSSAPSNPQQQFGSRLKPIGGGLVAARAAFLNSGGNLETAAAT LTPSSSDEQLSADNYFSYAAAAAAGAGLSGKMEAQRSLSGGSSSSTSASAASTSNLGK NGGGSTAYGRLNGPLKREDVYGAAAGHHQQQQQQQLQQQRDRERDQELKQYAGSVAGS VGSATSAAQRRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLRSSGGSGEGKGNGNG NGYDQNGEIQLLQQTLDTLCHTLDRDEAELRDSSDELFGIQRPAGSAGSNGSNNLSLQ SESTMRSIIDRLITMEEELRREQLKMSLALSHKQRVIEEQGQQIAALDAANSRLLSAL TALRQRYETQQQQQQQQQHQAPPKTQKPQ" misc_feature 1436..1780 /gene="raskol" /note="Synaptic Ras-GTPase activating protein family Pleckstrin homology (PH) domain; Region: PH_RasSynGAP-like; cd13262" /db_xref="CDD:270082" misc_feature 1754..2218 /gene="raskol" /note="C2 domain present in Ras GTPase activating protein (GAP) family; Region: C2_SynGAP_like; cd04013" /db_xref="CDD:175980" misc_feature 2189..3172 /gene="raskol" /note="Ras-GTPase Activating Domain of DAB2IP and similar proteins; Region: RasGAP_DAB2IP; cd05136" /db_xref="CDD:213338" misc_feature order(2306..2308,2414..2416,2420..2422,2426..2431, 2435..2437,2444..2446,2456..2458,2741..2743,2765..2770, 2777..2782,2789..2791,2852..2854,2861..2866,2873..2875, 2885..2887,2891..2893,2906..2911) /gene="raskol" /note="putative RAS interface [polypeptide binding]; other site" /db_xref="CDD:213338" misc_feature <5243..5434 /gene="raskol" /note="Domain of unknown function (DUF3498); Region: DUF3498; pfam12004" /db_xref="CDD:463427" ORIGIN 1 ttgttgtttt tttgacaacc gcggtcgacg tcacgtcgcg gctctccgct cttccagccg 61 attttgaaaa ccgaagcgaa accgttgtcg atccggatcc gaaatccgaa gatagctttt 121 attgtgtctt ttttttcgag tgttttgtgg gagagcgtcc cctccaaaaa aacaaggggc 181 agcaacaaca aggttacaac ttctggaccg cacacacaca cacacaatta aagccgccga 241 aacatgcaca tgcttgattt gttgttggcg gagtcgtgat ttaaaaataa tacagtacac 301 caaaataaat tacacacaca cacacgtata caggtgcaaa ataaagtttc tggtttctgg 361 tgataacaac aacagaaaca acagtaaata aggtggagag ccaaaaaaaa cataatccaa 421 aaaaagaggc accgctaaaa tgccactcag ctgttacgaa aaaaacagca aaaaacacta 481 aaaacaccga acaccgaaaa tcaggtggag agggagacgg agaggaaaga tggagattaa 541 aacaaagagc ggaattggat ttggaatcgt taaaaatcaa atgaaaacaa caacaacaac 601 aacctgctct tgaaatcgta acaaatctcg gtcttttatt tgctttgctt taatcttttg 661 ttttacaata accaataacc cccaaaaagc gccataaggc acaagtgcaa taaaaacaaa 721 gcaacaacag caagaacaaa caaaatcaat attcaaatta agcagcaact aaaacaacaa 781 caacaactca acgagtcgat aagctaaacg ataagtgaga ggatacggat acggatgcgg 841 tagagagcca gcccagcgaa agagagagcg ccggagagag gagagagaga gcacagcatc 901 cacctaaacc aaaattacca cccccaacaa aatgggacgt cgaacttatt taagccgggc 961 ctcggcgatt tcctacccca gcagaatcga aggatggctg gatgtctgtg aaaccgaggg 1021 agaactaact cgcctgatca agacgcttcc ttggggtccc ttatattgcg tccttcagca 1081 ggacgatcag acatttaccg cgtattgcag cgaggagata tcgatattcc cggccacgcc 1141 caacaaggag cggggtgatg tgtgctacga ggacattcca cgggtccgat tggatcgcgt 1201 tcgtcggccc gcaaaggctt tttgggacgg accgccgacc ttggccgagg aaaatgagga 1261 ctccgattct tgtgttggcg gcgagatgag cggcatcaat gacatcgtgc tgaatacgac 1321 gctttacagt gaactagata cttcctatga gaaggcgtgc cgccgtggat cagcgcccac 1381 tacgccgatt ttgggcagca aacagcacca gtcggagaac aatgccacct cgcgattcac 1441 caacttcttt tccaaaaaat ccaatcccct gaagcggacc aagtcggtga ccaaattgga 1501 gcgtaccaag cgcggatccg gcggactgag gggctcccgc tcgcacgaga gtctgctgtc 1561 cagtcacgcc gtcatgtcga ccatagatct ctcctgcact ggggcggtgg gcgtggcgcc 1621 ggtgcaccag tcagtcctcg ggcggcgtca ctgctttcag gtgcgcggcg ggccgcgtgg 1681 cgagcgctac tactcgtgcg gatcgcgcca ggagcgcgat ctctggatct actcgctgcg 1741 caagtcgata gccccgaatg ccgagcacac tcgccgcacg gacaactcgc tgaagatgtg 1801 ggtctacgag gcgaagaatc tgccgccgaa gaagcgttac ttttgcgaac tgcagctgga 1861 caaaacgctc tacgggcgga cgtcggtgaa gctgcagacg gatctgctct tctggggcga 1921 gcatttcgat ttccccgaca tcccagagat caatgtgatc acggtgaacg tttttcggga 1981 ggtggacaaa aagaagaagc gggacaagta tcagtttgtg ggttcagtga agatacccgt 2041 tcacgatgtg acctcgcgag tgccctgcga gcaatggtat cccatactca gcgacaaggc 2101 gggcgatagt ctgggcagaa cttctggagg tggtggatcg agtggttcga aggacaagga 2161 gcaactgccc acgctgagga tcaagtgccg tttccagagc accgacatcc tgcccatcaa 2221 tgtgtatgcc aactttttgg cctatctcaa ggagaactac aagagagttt gcgaaactct 2281 agagcccgtg attggtgtga aagccaagga ggatatagga caggcactgg ttctcctcat 2341 gcatgcccag ggattagccg gagcctttct caccgatgtg gttgccctgg atttactacg 2401 cgtcggtgat cagcgactga cttttagggg caactcgctg gccaccaaga gcatggaggc 2461 gtttctcaag ctcaccggcg agcagtatct gcaggatacc ctctcggcgc caattaacga 2521 actcatccaa tcggaaaggg attgcgaggt ggatcccacg aaggcgagcg gttcgtcggc 2581 gggttcactg cagcgtcagc aggccgcttt gcgtggagcg gtgcgagggg cgtggcagtg 2641 catcttcgag tcgcacaagc attttcccgc ccagctgcgt aattgttttg ccaccttccg 2701 ggagcgcctg caacaattgg gccgccagga tatggccgac aacctgatct cggccagcat 2761 ctttctgcgt ttcctgtgcc ccgccatcct gtcgccgtcg ctttttaata tcaccagcga 2821 attgccctcc gcaagggcca ctcgcaatct cactttggtg gccaagaccc tgcaaacgtt 2881 ggccaatttc acgaggtttc agggcaagga gaactttatg gagttcctga atgatttcct 2941 cgaacaggag gccgctcgca tgcagcagtt tctggagatt atatcgacaa ggcccgagca 3001 tcctgctccc gattcgatac tcgattgggc ggggtacatt gatcagggca agcagctctc 3061 cattttgcac agcctgctca gcgagagtct ggccaagctg ccggaggcca ggcagcacga 3121 gttggatcca ctgcagcaca ttctcgacga gattagccgg gccaaggagc atgggaatct 3181 gggaacagct ctgcctggag gatatctgcc ggcctcctcc tcgtcgacgc actcgatagc 3241 cagcgagaat caggagaatc gacagccggc caatccggat cagttgctgt tgcagcagca 3301 gcaaagtcag ctggcccagc cgcagcatgc gattgtcagc aagcctctgt cggcggagag 3361 gggcattatg cggggagttc tgaccccgaa ttctttagag aagaacatct ttcggtacaa 3421 tgatcccacg gttaatgggg tattgcaaca gcagcagttg caacagcagc agatgcagca 3481 acagcagttg cagcagcatc cccatcatca ttcacaaacc tccattgcgg gaaaccaata 3541 cctaagttcg ccgggcggcc tgcagcatgc ccaatcgcag acctcgatgg cctcctcctc 3601 gctcaacggc agcagcagca atttgttgca tcaacagcaa cagcaacatg tccaccccat 3661 gcagcatcca cattactgcc cgccggcgcc gcagacgagt gcctccagca ccatggagcg 3721 aatgaatccg tatccttatt tagcgcataa tggcaacgag tacgaggcca gcacgccatc 3781 gagcactcgc agcaggacac tgccacgaaa tggaaatgga agtggtcatc ccatgggcaa 3841 taataaccag agcggaagct acgacgacat gcacggcgag ttccagatac agatttccgg 3901 attggatacg agcagtgctt ttgtttgcaa gtcacccacg cccatgatga agtccagttt 3961 ggttggagga gcaagtcagg ctggtggagg agcaagaggc caccacaagc tgaatctagg 4021 aatacccgat cattcggggg tttatgtaag aggcggctgc ctgaatccca actcgaatat 4081 gcccaagaac ctggaggatc ttgacgatct gttcaagtac gccgaagagc acgatgtggc 4141 ggagcatcac cagcacagcc aacagaatca tcagcagaat caccagcagc agcagagtca 4201 cctgaagcca aatccaggat taccacccgg caaggagcag ctgtcggcga agagcagcca 4261 ctgcagctcc ggctaccaga gcatctccac caatccctcg ccctcgcagt cctccagtcc 4321 cgtggagagc cagctgaagg cagcgatggg cagtcacaat gcgccgctgg ccttcaagaa 4381 tccctcctac cagctgcagc cgagtcaggc gggcagatca tcggcaccta gtaatcccca 4441 gcaacagttt ggcagccgct taaagcccat tggaggtggc ctagtggccg ctagagcagc 4501 ttttctcaac agcggtggca acctggagac ggcggcggct acactgacgc ccagttcctc 4561 ggacgaacag ctctcggcgg ataactattt cagctatgca gcggcagcgg cggccggagc 4621 gggattgtcc gggaagatgg aggcacagcg ctcgctcagc ggcggcagca gctcctccac 4681 ttcggcctct gccgcatcca cctcaaatct gggcaagaat ggcgggggtt caacggccta 4741 cgggcggcta aatggaccgc tcaagcggga ggatgtctac ggggcagctg caggacacca 4801 tcagcagcag cagcagcagc agttgcaaca gcagagggat cgggaacggg atcaggaact 4861 caagcagtat gcaggcagtg tggcgggcag cgtgggctca gccacttcgg cggcccagag 4921 gcgactgagc ttggactcgg cgcgaacgct ttccgacagc agcacggata cggaaggaca 4981 ctgcaatcaa ttgcaggagg gcaagcgacg caggcagttg cgcagcagcg gcggcagcgg 5041 cgagggaaag ggcaatggca atggcaatgg ctacgaccag aacggggaga tccagctgct 5101 gcagcagacc ctggacacgc tctgccacac gctcgaccgc gacgaggccg agctgcgcga 5161 ctccagcgac gagctgttcg gaatccagcg gccagcgggc agcgccggca gcaatggctc 5221 gaacaatctc agcctgcagt cggagtccac catgcgcagc atcatcgaca gactcatcac 5281 catggaggag gagctgcggc gcgagcagct caagatgtcg ctggcgctgt cgcacaagca 5341 gcgcgtgatc gaggagcagg gccagcagat agcggccctg gatgcggcca acagtcggct 5401 gctgagcgcc ctgaccgccc tgcgccagcg gtacgagacg cagcagcagc agcaacagca 5461 gcagcagcac caagcaccac caaagaccca gaagccacag tgatgagcgg atggggggca 5521 ggaatcgaag gaggaggagg aggaggagga ggagaagtcc tggacaaact gacaagcatg 5581 cggacaccgt cttaaggata cctttttgtt tatttttttt agctattttt tttcgtatgc 5641 tacataaatt atactacatg tttaatatat agttacacat aacaatacat acattataca 5701 taatttctca atatatgttt aaaaaccaac cacaaaatgt gaaaataatg ctaaacgcag 5761 ctgcaagagc agtgagataa aaaccccaga agatcggagc atggaagtga agaagaaaca 5821 agaacaagtt aagataatga ataaaattat aaccaaagtt agacaaaaat gagaaaaagc