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LOCUS XM_017140584 5925 bp mRNA linear INV 09-DEC-2024 raskol (raskol), transcript variant X8, mRNA. ACCESSION XM_017140584 VERSION XM_017140584.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140584.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5925 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5925 /gene="raskol" /note="Ras GTPase-activating protein raskol; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056689" CDS 932..5548 /gene="raskol" /codon_start=1 /product="ras GTPase-activating protein raskol isoform X8" /protein_id="XP_016996073.2" /db_xref="GeneID:108056689" /translation="MGRRTYLSRASAISYPSRIEGWLDVCETEGELTRLIKTLPWGPL YCVLQQDDQTFTAYCSEEISRGDVCYEDIPRVRLDRVRRPAKAFWDGPPTLAEENEDS DSCVGGEMSGINDIVLNTTLYSELGEYKSKTLPRIHFDTALNDTSLNEDTSYEKACRR GSAPTTPILGSKQHQSENNATSRFTNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSR SHESLLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQE RDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRYFCELQLDKTLYGRTSV KLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRV PCEQWYPILSDKAGDSLGRTSGGGGSSGSKDKEQLPTLRIKCRFQSTDILPINVYANF LAYLKENYKRVCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGD QRLTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDPTKASGSSAG SLQRQQAALRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQDMADNLISAS IFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANFTRFQGKENFMEFLN DFLEQEAARMQQFLEIISTRPEHPAPDSILDWAGYIDQGKQLSILHSLLSESLAKLPE ARQHELDPLQHILDEISRAKEHGNLGTALPGGYLPASSSSTHSIASENQENRQPANPD QLLLQQQQSQLAQPQHAIVSKPLSAERGIMRGVLTPNSLEKNIFRYNDPTVNGVLQQQ QLQQQQMQQQQLQQHPHHHSQTSIAGNQYLSSPGGLQHAQSQTSMASSSLNGSSSNLL HQQQQQHVHPMQHPHYCPPAPQTSASSTMERMNPYPYLAHNGNEYEASTPSSTRSRTL PRNGNGSGHPMGNNNQSGSYDDMHGEFQIQISGLDTSSAFVCKSPTPMMKSSLVGGAS QAGGGARGHHKLNLGIPDHSGVYVRGGCLNPNSNMPKNLEDLDDLFKYAEEHDVAEHH QHSQQNHQQNHQQQQSHLKPNPGLPPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPV ESQLKAAMGSHNAPLAFKNPSYQLQPSQAGRSSAPSNPQQQFGSRLKPIGGGLVAARA AFLNSGGNLETAAATLTPSSSDEQLSADNYFSYAAAAAAGAGLSGKMEAQRSLSGGSS SSTSASAASTSNLGKNGGGSTAYGRLNGPLKREDVYGAAAGHHQQQQQQQLQQQRDRE RDQELKQYAGSVAGSVGSATSAAQRRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQL RSSGGSGEGKGNGNGNGYDQNGEIQLLQQTLDTLCHTLDRDEAELRDSSDELFGIQRP AGSAGSNGSNNLSLQSESTMRSIIDRLITMEEELRREQLKMSLALSHKQRVIEEQGQQ IAALDAANSRLLSALTALRQRYETQQQQQQQQQHQAPPKTQKPQ" misc_feature 1481..1825 /gene="raskol" /note="Synaptic Ras-GTPase activating protein family Pleckstrin homology (PH) domain; Region: PH_RasSynGAP-like; cd13262" /db_xref="CDD:270082" misc_feature 1799..2263 /gene="raskol" /note="C2 domain present in Ras GTPase activating protein (GAP) family; Region: C2_SynGAP_like; cd04013" /db_xref="CDD:175980" misc_feature 2234..3217 /gene="raskol" /note="Ras-GTPase Activating Domain of DAB2IP and similar proteins; Region: RasGAP_DAB2IP; cd05136" /db_xref="CDD:213338" misc_feature order(2351..2353,2459..2461,2465..2467,2471..2476, 2480..2482,2489..2491,2501..2503,2786..2788,2810..2815, 2822..2827,2834..2836,2897..2899,2906..2911,2918..2920, 2930..2932,2936..2938,2951..2956) /gene="raskol" /note="putative RAS interface [polypeptide binding]; other site" /db_xref="CDD:213338" misc_feature <5288..5479 /gene="raskol" /note="Domain of unknown function (DUF3498); Region: DUF3498; pfam12004" /db_xref="CDD:463427" ORIGIN 1 ttgttgtttt tttgacaacc gcggtcgacg tcacgtcgcg gctctccgct cttccagccg 61 attttgaaaa ccgaagcgaa accgttgtcg atccggatcc gaaatccgaa gatagctttt 121 attgtgtctt ttttttcgag tgttttgtgg gagagcgtcc cctccaaaaa aacaaggggc 181 agcaacaaca aggttacaac ttctggaccg cacacacaca cacacaatta aagccgccga 241 aacatgcaca tgcttgattt gttgttggcg gagtcgtgat ttaaaaataa tacagtacac 301 caaaataaat tacacacaca cacacgtata caggtgcaaa ataaagtttc tggtttctgg 361 tgataacaac aacagaaaca acagtaaata aggtggagag ccaaaaaaaa cataatccaa 421 aaaaagaggc accgctaaaa tgccactcag ctgttacgaa aaaaacagca aaaaacacta 481 aaaacaccga acaccgaaaa tcaggtggag agggagacgg agaggaaaga tggagattaa 541 aacaaagagc ggaattggat ttggaatcgt taaaaatcaa atgaaaacaa caacaacaac 601 aacctgctct tgaaatcgta acaaatctcg gtcttttatt tgctttgctt taatcttttg 661 ttttacaata accaataacc cccaaaaagc gccataaggc acaagtgcaa taaaaacaaa 721 gcaacaacag caagaacaaa caaaatcaat attcaaatta agcagcaact aaaacaacaa 781 caacaactca acgagtcgat aagctaaacg ataagtgaga ggatacggat acggatgcgg 841 tagagagcca gcccagcgaa agagagagcg ccggagagag gagagagaga gcacagcatc 901 cacctaaacc aaaattacca cccccaacaa aatgggacgt cgaacttatt taagccgggc 961 ctcggcgatt tcctacccca gcagaatcga aggatggctg gatgtctgtg aaaccgaggg 1021 agaactaact cgcctgatca agacgcttcc ttggggtccc ttatattgcg tccttcagca 1081 ggacgatcag acatttaccg cgtattgcag cgaggagata tcgcggggtg atgtgtgcta 1141 cgaggacatt ccacgggtcc gattggatcg cgttcgtcgg cccgcaaagg ctttttggga 1201 cggaccgccg accttggccg aggaaaatga ggactccgat tcttgtgttg gcggcgagat 1261 gagcggcatc aatgacatcg tgctgaatac gacgctttac agtgaactag gtgagtacaa 1321 gtcgaagaca ctgcctcgca tacatttcga tacggcgcta aacgatacgt cgctgaatga 1381 agatacttcc tatgagaagg cgtgccgccg tggatcagcg cccactacgc cgattttggg 1441 cagcaaacag caccagtcgg agaacaatgc cacctcgcga ttcaccaact tcttttccaa 1501 aaaatccaat cccctgaagc ggaccaagtc ggtgaccaaa ttggagcgta ccaagcgcgg 1561 atccggcgga ctgaggggct cccgctcgca cgagagtctg ctgtccagtc acgccgtcat 1621 gtcgaccata gatctctcct gcactggggc ggtgggcgtg gcgccggtgc accagtcagt 1681 cctcgggcgg cgtcactgct ttcaggtgcg cggcgggccg cgtggcgagc gctactactc 1741 gtgcggatcg cgccaggagc gcgatctctg gatctactcg ctgcgcaagt cgatagcccc 1801 gaatgccgag cacactcgcc gcacggacaa ctcgctgaag atgtgggtct acgaggcgaa 1861 gaatctgccg ccgaagaagc gttacttttg cgaactgcag ctggacaaaa cgctctacgg 1921 gcggacgtcg gtgaagctgc agacggatct gctcttctgg ggcgagcatt tcgatttccc 1981 cgacatccca gagatcaatg tgatcacggt gaacgttttt cgggaggtgg acaaaaagaa 2041 gaagcgggac aagtatcagt ttgtgggttc agtgaagata cccgttcacg atgtgacctc 2101 gcgagtgccc tgcgagcaat ggtatcccat actcagcgac aaggcgggcg atagtctggg 2161 cagaacttct ggaggtggtg gatcgagtgg ttcgaaggac aaggagcaac tgcccacgct 2221 gaggatcaag tgccgtttcc agagcaccga catcctgccc atcaatgtgt atgccaactt 2281 tttggcctat ctcaaggaga actacaagag agtttgcgaa actctagagc ccgtgattgg 2341 tgtgaaagcc aaggaggata taggacaggc actggttctc ctcatgcatg cccagggatt 2401 agccggagcc tttctcaccg atgtggttgc cctggattta ctacgcgtcg gtgatcagcg 2461 actgactttt aggggcaact cgctggccac caagagcatg gaggcgtttc tcaagctcac 2521 cggcgagcag tatctgcagg ataccctctc ggcgccaatt aacgaactca tccaatcgga 2581 aagggattgc gaggtggatc ccacgaaggc gagcggttcg tcggcgggtt cactgcagcg 2641 tcagcaggcc gctttgcgtg gagcggtgcg aggggcgtgg cagtgcatct tcgagtcgca 2701 caagcatttt cccgcccagc tgcgtaattg ttttgccacc ttccgggagc gcctgcaaca 2761 attgggccgc caggatatgg ccgacaacct gatctcggcc agcatctttc tgcgtttcct 2821 gtgccccgcc atcctgtcgc cgtcgctttt taatatcacc agcgaattgc cctccgcaag 2881 ggccactcgc aatctcactt tggtggccaa gaccctgcaa acgttggcca atttcacgag 2941 gtttcagggc aaggagaact ttatggagtt cctgaatgat ttcctcgaac aggaggccgc 3001 tcgcatgcag cagtttctgg agattatatc gacaaggccc gagcatcctg ctcccgattc 3061 gatactcgat tgggcggggt acattgatca gggcaagcag ctctccattt tgcacagcct 3121 gctcagcgag agtctggcca agctgccgga ggccaggcag cacgagttgg atccactgca 3181 gcacattctc gacgagatta gccgggccaa ggagcatggg aatctgggaa cagctctgcc 3241 tggaggatat ctgccggcct cctcctcgtc gacgcactcg atagccagcg agaatcagga 3301 gaatcgacag ccggccaatc cggatcagtt gctgttgcag cagcagcaaa gtcagctggc 3361 ccagccgcag catgcgattg tcagcaagcc tctgtcggcg gagaggggca ttatgcgggg 3421 agttctgacc ccgaattctt tagagaagaa catctttcgg tacaatgatc ccacggttaa 3481 tggggtattg caacagcagc agttgcaaca gcagcagatg cagcaacagc agttgcagca 3541 gcatccccat catcattcac aaacctccat tgcgggaaac caatacctaa gttcgccggg 3601 cggcctgcag catgcccaat cgcagacctc gatggcctcc tcctcgctca acggcagcag 3661 cagcaatttg ttgcatcaac agcaacagca acatgtccac cccatgcagc atccacatta 3721 ctgcccgccg gcgccgcaga cgagtgcctc cagcaccatg gagcgaatga atccgtatcc 3781 ttatttagcg cataatggca acgagtacga ggccagcacg ccatcgagca ctcgcagcag 3841 gacactgcca cgaaatggaa atggaagtgg tcatcccatg ggcaataata accagagcgg 3901 aagctacgac gacatgcacg gcgagttcca gatacagatt tccggattgg atacgagcag 3961 tgcttttgtt tgcaagtcac ccacgcccat gatgaagtcc agtttggttg gaggagcaag 4021 tcaggctggt ggaggagcaa gaggccacca caagctgaat ctaggaatac ccgatcattc 4081 gggggtttat gtaagaggcg gctgcctgaa tcccaactcg aatatgccca agaacctgga 4141 ggatcttgac gatctgttca agtacgccga agagcacgat gtggcggagc atcaccagca 4201 cagccaacag aatcatcagc agaatcacca gcagcagcag agtcacctga agccaaatcc 4261 aggattacca cccggcaagg agcagctgtc ggcgaagagc agccactgca gctccggcta 4321 ccagagcatc tccaccaatc cctcgccctc gcagtcctcc agtcccgtgg agagccagct 4381 gaaggcagcg atgggcagtc acaatgcgcc gctggccttc aagaatccct cctaccagct 4441 gcagccgagt caggcgggca gatcatcggc acctagtaat ccccagcaac agtttggcag 4501 ccgcttaaag cccattggag gtggcctagt ggccgctaga gcagcttttc tcaacagcgg 4561 tggcaacctg gagacggcgg cggctacact gacgcccagt tcctcggacg aacagctctc 4621 ggcggataac tatttcagct atgcagcggc agcggcggcc ggagcgggat tgtccgggaa 4681 gatggaggca cagcgctcgc tcagcggcgg cagcagctcc tccacttcgg cctctgccgc 4741 atccacctca aatctgggca agaatggcgg gggttcaacg gcctacgggc ggctaaatgg 4801 accgctcaag cgggaggatg tctacggggc agctgcagga caccatcagc agcagcagca 4861 gcagcagttg caacagcaga gggatcggga acgggatcag gaactcaagc agtatgcagg 4921 cagtgtggcg ggcagcgtgg gctcagccac ttcggcggcc cagaggcgac tgagcttgga 4981 ctcggcgcga acgctttccg acagcagcac ggatacggaa ggacactgca atcaattgca 5041 ggagggcaag cgacgcaggc agttgcgcag cagcggcggc agcggcgagg gaaagggcaa 5101 tggcaatggc aatggctacg accagaacgg ggagatccag ctgctgcagc agaccctgga 5161 cacgctctgc cacacgctcg accgcgacga ggccgagctg cgcgactcca gcgacgagct 5221 gttcggaatc cagcggccag cgggcagcgc cggcagcaat ggctcgaaca atctcagcct 5281 gcagtcggag tccaccatgc gcagcatcat cgacagactc atcaccatgg aggaggagct 5341 gcggcgcgag cagctcaaga tgtcgctggc gctgtcgcac aagcagcgcg tgatcgagga 5401 gcagggccag cagatagcgg ccctggatgc ggccaacagt cggctgctga gcgccctgac 5461 cgccctgcgc cagcggtacg agacgcagca gcagcagcaa cagcagcagc agcaccaagc 5521 accaccaaag acccagaagc cacagtgatg agcggatggg gggcaggaat cgaaggagga 5581 ggaggaggag gaggaggaga agtcctggac aaactgacaa gcatgcggac accgtcttaa 5641 ggataccttt ttgtttattt tttttagcta ttttttttcg tatgctacat aaattatact 5701 acatgtttaa tatatagtta cacataacaa tacatacatt atacataatt tctcaatata 5761 tgtttaaaaa ccaaccacaa aatgtgaaaa taatgctaaa cgcagctgca agagcagtga 5821 gataaaaacc ccagaagatc ggagcatgga agtgaagaag aaacaagaac aagttaagat 5881 aatgaataaa attataacca aagttagaca aaaatgagaa aaagc