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LOCUS XM_017140583 5952 bp mRNA linear INV 09-DEC-2024 raskol (raskol), transcript variant X6, mRNA. ACCESSION XM_017140583 VERSION XM_017140583.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140583.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5952 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5952 /gene="raskol" /note="Ras GTPase-activating protein raskol; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056689" CDS 932..5575 /gene="raskol" /codon_start=1 /product="ras GTPase-activating protein raskol isoform X6" /protein_id="XP_016996072.2" /db_xref="GeneID:108056689" /translation="MGRRTYLSRASAISYPSRIEGWLDVCETEGELTRLIKTLPWGPL YCVLQQDDQTFTAYCSEEISIFPATPNKERGDVCYEDIPRVRLDRVRRPAKAFWDGPP TLAEENEDSDSCVGGEMSGINDIVLNTTLYSELGEYKSKTLPRIHFDTALNDTSLNED TSYEKACRRGSAPTTPILGSKQHQSENNATSRFTNFFSKKSNPLKRTKSVTKLERTKR GSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVGVAPVHQSVLGRRHCFQVRGGPRGER YYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDNSLKMWVYEAKNLPPKKRYFCELQLD KTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVITVNVFREVDKKKKRDKYQFVGSVKI PVHDVTSRVPCEQWYPILSDKAGDSLGRTSGGGGSSGSKDKEQLPTLRIKCRFQSTDI LPINVYANFLAYLKENYKRVCETLEPVIGVKAKEDIGQALVLLMHAQGLAGAFLTDVV ALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGEQYLQDTLSAPINELIQSERDCEVDP TKASGSSAGSLQRQQAALRGAVRGAWQCIFESHKHFPAQLRNCFATFRERLQQLGRQD MADNLISASIFLRFLCPAILSPSLFNITSELPSARATRNLTLVAKTLQTLANFTRFQG KENFMEFLNDFLEQEAARMQQFLEIISTRPEHPAPDSILDWAGYIDQGKQLSILHSLL SESLAKLPEARQHELDPLQHILDEISRAKEHGNLGTALPGGYLPASSSSTHSIASENQ ENRQPANPDQLLLQQQQSQLAQPQHAIVSKPLSAERGIMRGVLTPNSLEKNIFRYNDP TVNGVLQQQQLQQQQMQQQQLQQHPHHHSQTSIAGNQYLSSPGGLQHAQSQTSMASSS LNGSSSNLLHQQQQQHVHPMQHPHYCPPAPQTSASSTMERMNPYPYLAHNGNEYEAST PSSTRSRTLPRNGNGSGHPMGNNNQSGSYDDMHGEFQIQISGLDTSSAFVCKSPTPMM KSSLVGGASQAGGGARGHHKLNLGIPDHSGVYVRGGCLNPNSNMPKNLEDLDDLFKYA EEHDVAEHHQHSQQNHQQNHQQQQSHLKPNPGLPPGKEQLSAKSSHCSSGYQSISTNP SPSQSSSPVESQLKAAMGSHNAPLAFKNPSYQLQPSQAGRSSAPSNPQQQFGSRLKPI GGGLVAARAAFLNSGGNLETAAATLTPSSSDEQLSADNYFSYAAAAAAGAGLSGKMEA QRSLSGGSSSSTSASAASTSNLGKNGGGSTAYGRLNGPLKREDVYGAAAGHHQQQQQQ QLQQQRDRERDQELKQYAGSVAGSVGSATSAAQRRLSLDSARTLSDSSTDTEGHCNQL QEGKRRRQLRSSGGSGEGKGNGNGNGYDQNGEIQLLQQTLDTLCHTLDRDEAELRDSS DELFGIQRPAGSAGSNGSNNLSLQSESTMRSIIDRLITMEEELRREQLKMSLALSHKQ RVIEEQGQQIAALDAANSRLLSALTALRQRYETQQQQQQQQQHQAPPKTQKPQ" misc_feature 1508..1852 /gene="raskol" /note="Synaptic Ras-GTPase activating protein family Pleckstrin homology (PH) domain; Region: PH_RasSynGAP-like; cd13262" /db_xref="CDD:270082" misc_feature 1826..2290 /gene="raskol" /note="C2 domain present in Ras GTPase activating protein (GAP) family; Region: C2_SynGAP_like; cd04013" /db_xref="CDD:175980" misc_feature 2261..3244 /gene="raskol" /note="Ras-GTPase Activating Domain of DAB2IP and similar proteins; Region: RasGAP_DAB2IP; cd05136" /db_xref="CDD:213338" misc_feature order(2378..2380,2486..2488,2492..2494,2498..2503, 2507..2509,2516..2518,2528..2530,2813..2815,2837..2842, 2849..2854,2861..2863,2924..2926,2933..2938,2945..2947, 2957..2959,2963..2965,2978..2983) /gene="raskol" /note="putative RAS interface [polypeptide binding]; other site" /db_xref="CDD:213338" misc_feature <5315..5506 /gene="raskol" /note="Domain of unknown function (DUF3498); Region: DUF3498; pfam12004" /db_xref="CDD:463427" ORIGIN 1 ttgttgtttt tttgacaacc gcggtcgacg tcacgtcgcg gctctccgct cttccagccg 61 attttgaaaa ccgaagcgaa accgttgtcg atccggatcc gaaatccgaa gatagctttt 121 attgtgtctt ttttttcgag tgttttgtgg gagagcgtcc cctccaaaaa aacaaggggc 181 agcaacaaca aggttacaac ttctggaccg cacacacaca cacacaatta aagccgccga 241 aacatgcaca tgcttgattt gttgttggcg gagtcgtgat ttaaaaataa tacagtacac 301 caaaataaat tacacacaca cacacgtata caggtgcaaa ataaagtttc tggtttctgg 361 tgataacaac aacagaaaca acagtaaata aggtggagag ccaaaaaaaa cataatccaa 421 aaaaagaggc accgctaaaa tgccactcag ctgttacgaa aaaaacagca aaaaacacta 481 aaaacaccga acaccgaaaa tcaggtggag agggagacgg agaggaaaga tggagattaa 541 aacaaagagc ggaattggat ttggaatcgt taaaaatcaa atgaaaacaa caacaacaac 601 aacctgctct tgaaatcgta acaaatctcg gtcttttatt tgctttgctt taatcttttg 661 ttttacaata accaataacc cccaaaaagc gccataaggc acaagtgcaa taaaaacaaa 721 gcaacaacag caagaacaaa caaaatcaat attcaaatta agcagcaact aaaacaacaa 781 caacaactca acgagtcgat aagctaaacg ataagtgaga ggatacggat acggatgcgg 841 tagagagcca gcccagcgaa agagagagcg ccggagagag gagagagaga gcacagcatc 901 cacctaaacc aaaattacca cccccaacaa aatgggacgt cgaacttatt taagccgggc 961 ctcggcgatt tcctacccca gcagaatcga aggatggctg gatgtctgtg aaaccgaggg 1021 agaactaact cgcctgatca agacgcttcc ttggggtccc ttatattgcg tccttcagca 1081 ggacgatcag acatttaccg cgtattgcag cgaggagata tcgatattcc cggccacgcc 1141 caacaaggag cggggtgatg tgtgctacga ggacattcca cgggtccgat tggatcgcgt 1201 tcgtcggccc gcaaaggctt tttgggacgg accgccgacc ttggccgagg aaaatgagga 1261 ctccgattct tgtgttggcg gcgagatgag cggcatcaat gacatcgtgc tgaatacgac 1321 gctttacagt gaactaggtg agtacaagtc gaagacactg cctcgcatac atttcgatac 1381 ggcgctaaac gatacgtcgc tgaatgaaga tacttcctat gagaaggcgt gccgccgtgg 1441 atcagcgccc actacgccga ttttgggcag caaacagcac cagtcggaga acaatgccac 1501 ctcgcgattc accaacttct tttccaaaaa atccaatccc ctgaagcgga ccaagtcggt 1561 gaccaaattg gagcgtacca agcgcggatc cggcggactg aggggctccc gctcgcacga 1621 gagtctgctg tccagtcacg ccgtcatgtc gaccatagat ctctcctgca ctggggcggt 1681 gggcgtggcg ccggtgcacc agtcagtcct cgggcggcgt cactgctttc aggtgcgcgg 1741 cgggccgcgt ggcgagcgct actactcgtg cggatcgcgc caggagcgcg atctctggat 1801 ctactcgctg cgcaagtcga tagccccgaa tgccgagcac actcgccgca cggacaactc 1861 gctgaagatg tgggtctacg aggcgaagaa tctgccgccg aagaagcgtt acttttgcga 1921 actgcagctg gacaaaacgc tctacgggcg gacgtcggtg aagctgcaga cggatctgct 1981 cttctggggc gagcatttcg atttccccga catcccagag atcaatgtga tcacggtgaa 2041 cgtttttcgg gaggtggaca aaaagaagaa gcgggacaag tatcagtttg tgggttcagt 2101 gaagataccc gttcacgatg tgacctcgcg agtgccctgc gagcaatggt atcccatact 2161 cagcgacaag gcgggcgata gtctgggcag aacttctgga ggtggtggat cgagtggttc 2221 gaaggacaag gagcaactgc ccacgctgag gatcaagtgc cgtttccaga gcaccgacat 2281 cctgcccatc aatgtgtatg ccaacttttt ggcctatctc aaggagaact acaagagagt 2341 ttgcgaaact ctagagcccg tgattggtgt gaaagccaag gaggatatag gacaggcact 2401 ggttctcctc atgcatgccc agggattagc cggagccttt ctcaccgatg tggttgccct 2461 ggatttacta cgcgtcggtg atcagcgact gacttttagg ggcaactcgc tggccaccaa 2521 gagcatggag gcgtttctca agctcaccgg cgagcagtat ctgcaggata ccctctcggc 2581 gccaattaac gaactcatcc aatcggaaag ggattgcgag gtggatccca cgaaggcgag 2641 cggttcgtcg gcgggttcac tgcagcgtca gcaggccgct ttgcgtggag cggtgcgagg 2701 ggcgtggcag tgcatcttcg agtcgcacaa gcattttccc gcccagctgc gtaattgttt 2761 tgccaccttc cgggagcgcc tgcaacaatt gggccgccag gatatggccg acaacctgat 2821 ctcggccagc atctttctgc gtttcctgtg ccccgccatc ctgtcgccgt cgctttttaa 2881 tatcaccagc gaattgccct ccgcaagggc cactcgcaat ctcactttgg tggccaagac 2941 cctgcaaacg ttggccaatt tcacgaggtt tcagggcaag gagaacttta tggagttcct 3001 gaatgatttc ctcgaacagg aggccgctcg catgcagcag tttctggaga ttatatcgac 3061 aaggcccgag catcctgctc ccgattcgat actcgattgg gcggggtaca ttgatcaggg 3121 caagcagctc tccattttgc acagcctgct cagcgagagt ctggccaagc tgccggaggc 3181 caggcagcac gagttggatc cactgcagca cattctcgac gagattagcc gggccaagga 3241 gcatgggaat ctgggaacag ctctgcctgg aggatatctg ccggcctcct cctcgtcgac 3301 gcactcgata gccagcgaga atcaggagaa tcgacagccg gccaatccgg atcagttgct 3361 gttgcagcag cagcaaagtc agctggccca gccgcagcat gcgattgtca gcaagcctct 3421 gtcggcggag aggggcatta tgcggggagt tctgaccccg aattctttag agaagaacat 3481 ctttcggtac aatgatccca cggttaatgg ggtattgcaa cagcagcagt tgcaacagca 3541 gcagatgcag caacagcagt tgcagcagca tccccatcat cattcacaaa cctccattgc 3601 gggaaaccaa tacctaagtt cgccgggcgg cctgcagcat gcccaatcgc agacctcgat 3661 ggcctcctcc tcgctcaacg gcagcagcag caatttgttg catcaacagc aacagcaaca 3721 tgtccacccc atgcagcatc cacattactg cccgccggcg ccgcagacga gtgcctccag 3781 caccatggag cgaatgaatc cgtatcctta tttagcgcat aatggcaacg agtacgaggc 3841 cagcacgcca tcgagcactc gcagcaggac actgccacga aatggaaatg gaagtggtca 3901 tcccatgggc aataataacc agagcggaag ctacgacgac atgcacggcg agttccagat 3961 acagatttcc ggattggata cgagcagtgc ttttgtttgc aagtcaccca cgcccatgat 4021 gaagtccagt ttggttggag gagcaagtca ggctggtgga ggagcaagag gccaccacaa 4081 gctgaatcta ggaatacccg atcattcggg ggtttatgta agaggcggct gcctgaatcc 4141 caactcgaat atgcccaaga acctggagga tcttgacgat ctgttcaagt acgccgaaga 4201 gcacgatgtg gcggagcatc accagcacag ccaacagaat catcagcaga atcaccagca 4261 gcagcagagt cacctgaagc caaatccagg attaccaccc ggcaaggagc agctgtcggc 4321 gaagagcagc cactgcagct ccggctacca gagcatctcc accaatccct cgccctcgca 4381 gtcctccagt cccgtggaga gccagctgaa ggcagcgatg ggcagtcaca atgcgccgct 4441 ggccttcaag aatccctcct accagctgca gccgagtcag gcgggcagat catcggcacc 4501 tagtaatccc cagcaacagt ttggcagccg cttaaagccc attggaggtg gcctagtggc 4561 cgctagagca gcttttctca acagcggtgg caacctggag acggcggcgg ctacactgac 4621 gcccagttcc tcggacgaac agctctcggc ggataactat ttcagctatg cagcggcagc 4681 ggcggccgga gcgggattgt ccgggaagat ggaggcacag cgctcgctca gcggcggcag 4741 cagctcctcc acttcggcct ctgccgcatc cacctcaaat ctgggcaaga atggcggggg 4801 ttcaacggcc tacgggcggc taaatggacc gctcaagcgg gaggatgtct acggggcagc 4861 tgcaggacac catcagcagc agcagcagca gcagttgcaa cagcagaggg atcgggaacg 4921 ggatcaggaa ctcaagcagt atgcaggcag tgtggcgggc agcgtgggct cagccacttc 4981 ggcggcccag aggcgactga gcttggactc ggcgcgaacg ctttccgaca gcagcacgga 5041 tacggaagga cactgcaatc aattgcagga gggcaagcga cgcaggcagt tgcgcagcag 5101 cggcggcagc ggcgagggaa agggcaatgg caatggcaat ggctacgacc agaacgggga 5161 gatccagctg ctgcagcaga ccctggacac gctctgccac acgctcgacc gcgacgaggc 5221 cgagctgcgc gactccagcg acgagctgtt cggaatccag cggccagcgg gcagcgccgg 5281 cagcaatggc tcgaacaatc tcagcctgca gtcggagtcc accatgcgca gcatcatcga 5341 cagactcatc accatggagg aggagctgcg gcgcgagcag ctcaagatgt cgctggcgct 5401 gtcgcacaag cagcgcgtga tcgaggagca gggccagcag atagcggccc tggatgcggc 5461 caacagtcgg ctgctgagcg ccctgaccgc cctgcgccag cggtacgaga cgcagcagca 5521 gcagcaacag cagcagcagc accaagcacc accaaagacc cagaagccac agtgatgagc 5581 ggatgggggg caggaatcga aggaggagga ggaggaggag gaggagaagt cctggacaaa 5641 ctgacaagca tgcggacacc gtcttaagga tacctttttg tttatttttt ttagctattt 5701 tttttcgtat gctacataaa ttatactaca tgtttaatat atagttacac ataacaatac 5761 atacattata cataatttct caatatatgt ttaaaaacca accacaaaat gtgaaaataa 5821 tgctaaacgc agctgcaaga gcagtgagat aaaaacccca gaagatcgga gcatggaagt 5881 gaagaagaaa caagaacaag ttaagataat gaataaaatt ataaccaaag ttagacaaaa 5941 atgagaaaaa gc