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LOCUS XM_017140578 7148 bp mRNA linear INV 09-DEC-2024 raskol (raskol), transcript variant X1, mRNA. ACCESSION XM_017140578 VERSION XM_017140578.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140578.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7148 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7148 /gene="raskol" /note="Ras GTPase-activating protein raskol; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056689" CDS 812..6769 /gene="raskol" /codon_start=1 /product="ras GTPase-activating protein raskol isoform X1" /protein_id="XP_016996067.2" /db_xref="GeneID:108056689" /translation="MLQAASSTTTTTASTIDNNNTANTEHSEHPIVATPEEKTQRRRS TFYVPLVIEDEEEGSSQDHHLVVQKSSSNTSLSSNSNSLTNSSESKSSKSYSLRKSSS VKSGVAKVSALFERKTTSPSKPQIMSPPPPCGFNWSISGSETAAQYSDSDEDEENSSE ARHREQLLKSLPTGNNNTQTASPSKLKRYGIVLNVISLNGSDNEQGSLGSTTTIPSNT NLLPNTGITAPRTHFNEENDIVLATPPPPKKNSQECNDYDDDSEISRMQTNTSTPIKL MKSRSRTNILAVPLPSVERGLATSSMGSTTGTSTSTSTTTTTTTLITLRAKSKTLPQN LSPSVVLREAAALDELEKKREKYQEKQEKLQEKQRQLFGGSTVSQIVGSSSGSSPYKL QNSCSATSILTHSFPPKNLFLLKSTPKLSADIAVAPPNTSVICSPPKKSLSFIRRAHS TKVSRSNSLLKPNQSGLLGSGSGIASGLSVNPSSVNMQGSSSLSTSCAGGGGGSDSTS NNGSWGKHFYQPYDVCPLSLDELNCYFQADHCEELICERFKIRDLAIHMASASATGAD LSVTTENENETTTTAAEDDAGHHSDTSYEKACRRGSAPTTPILGSKQHQSENNATSRF TNFFSKKSNPLKRTKSVTKLERTKRGSGGLRGSRSHESLLSSHAVMSTIDLSCTGAVG VAPVHQSVLGRRHCFQVRGGPRGERYYSCGSRQERDLWIYSLRKSIAPNAEHTRRTDN SLKMWVYEAKNLPPKKRYFCELQLDKTLYGRTSVKLQTDLLFWGEHFDFPDIPEINVI TVNVFREVDKKKKRDKYQFVGSVKIPVHDVTSRVPCEQWYPILSDKAGDSLGRTSGGG GSSGSKDKEQLPTLRIKCRFQSTDILPINVYANFLAYLKENYKRVCETLEPVIGVKAK EDIGQALVLLMHAQGLAGAFLTDVVALDLLRVGDQRLTFRGNSLATKSMEAFLKLTGE QYLQDTLSAPINELIQSERDCEVDPTKASGSSAGSLQRQQAALRGAVRGAWQCIFESH KHFPAQLRNCFATFRERLQQLGRQDMADNLISASIFLRFLCPAILSPSLFNITSELPS ARATRNLTLVAKTLQTLANFTRFQGKENFMEFLNDFLEQEAARMQQFLEIISTRPEHP APDSILDWAGYIDQGKQLSILHSLLSESLAKLPEARQHELDPLQHILDEISRAKEHGN LGTALPGGYLPASSSSTHSIASENQENRQPANPDQLLLQQQQSQLAQPQHAIVSKPLS AERGIMRGVLTPNSLEKNIFRYNDPTVNGVLQQQQLQQQQMQQQQLQQHPHHHSQTSI AGNQYLSSPGGLQHAQSQTSMASSSLNGSSSNLLHQQQQQHVHPMQHPHYCPPAPQTS ASSTMERMNPYPYLAHNGNEYEASTPSSTRSRTLPRNGNGSGHPMGNNNQSGSYDDMH GEFQIQISGLDTSSAFVCKSPTPMMKSSLVGGASQAGGGARGHHKLNLGIPDHSGVYV RGGCLNPNSNMPKNLEDLDDLFKYAEEHDVAEHHQHSQQNHQQNHQQQQSHLKPNPGL PPGKEQLSAKSSHCSSGYQSISTNPSPSQSSSPVESQLKAAMGSHNAPLAFKNPSYQL QPSQAGRSSAPSNPQQQFGSRLKPIGGGLVAARAAFLNSGGNLETAAATLTPSSSDEQ LSADNYFSYAAAAAAGAGLSGKMEAQRSLSGGSSSSTSASAASTSNLGKNGGGSTAYG RLNGPLKREDVYGAAAGHHQQQQQQQLQQQRDRERDQELKQYAGSVAGSVGSATSAAQ RRLSLDSARTLSDSSTDTEGHCNQLQEGKRRRQLRSSGGSGEGKGNGNGNGYDQNGEI QLLQQTLDTLCHTLDRDEAELRDSSDELFGIQRPAGSAGSNGSNNLSLQSESTMRSII DSFFQSSCRLITMEEELRREQLKMSLALSHKQRVIEEQGQQIAALDAANSRLLSALTA LRQRYETQQQQQQQQQHQAPPKTQKPQ" misc_feature 2681..3025 /gene="raskol" /note="Synaptic Ras-GTPase activating protein family Pleckstrin homology (PH) domain; Region: PH_RasSynGAP-like; cd13262" /db_xref="CDD:270082" misc_feature 2999..3463 /gene="raskol" /note="C2 domain present in Ras GTPase activating protein (GAP) family; Region: C2_SynGAP_like; cd04013" /db_xref="CDD:175980" misc_feature 3434..4417 /gene="raskol" /note="Ras-GTPase Activating Domain of DAB2IP and similar proteins; Region: RasGAP_DAB2IP; cd05136" /db_xref="CDD:213338" misc_feature order(3551..3553,3659..3661,3665..3667,3671..3676, 3680..3682,3689..3691,3701..3703,3986..3988,4010..4015, 4022..4027,4034..4036,4097..4099,4106..4111,4118..4120, 4130..4132,4136..4138,4151..4156) /gene="raskol" /note="putative RAS interface [polypeptide binding]; other site" /db_xref="CDD:213338" misc_feature <6488..6700 /gene="raskol" /note="Domain of unknown function (DUF3498); Region: DUF3498; pfam12004" /db_xref="CDD:463427" ORIGIN 1 atcagatcca tttttgaatt cgggtggagt ggatgcggcg gcaagcggct gttcaaatcg 61 ctccgtttat tattgttttt aacttcgctg gcgcgtcggt tttactgttt tattatattt 121 ttgccactgg ctaaaaatat tcctgtttgt taagccacct attaaatatt aaaattgtta 181 aaaaatatac ccaaagcgag tgttattttt gttcaagtgt tttatatccc ccctcttatc 241 ccaaaagaga aaaaaaacgc attcctgtac acgaagaaaa aaaatatgcg tgtgcgtgtg 301 tattagtgca ggctctctgc gctgcaaatg tgtgtgtgcg agtgtgtgta tgctgcaatt 361 gaaaaccaaa attaaacaaa caaaaaaaat agagtagtac aacaaagtaa tgagaaactt 421 aaccaccgag cgacaatgtg atgcgaaaag gcgataaaaa aaacggcagc aaaaacaaaa 481 ggcgtgaaga aagagaagaa acgcggaaat gcagttgagc gcataattta taagccaagc 541 gacaaacgac gcacacactc aaagaaagcc aagtacaaaa aactaataga gagaagaaat 601 aaataagatt caagaattaa aaaaaaagaa gcatcagcgg aaaagagaaa gaagtggaag 661 cagcgtcagt cgtcaacaaa cacaaacaca agcaaacaaa aaatatacct gcgtgcgctc 721 tctctctctc tttccctccc tctcactctc tcatgcaaat gtgtgtgtgt gccatgttct 781 cgaaaataca ctgagcgaaa cacacagaaa aatgttgcag gccgccagca gcacaacaac 841 aacaacagca agtacaatag acaacaacaa cacagcaaac actgagcaca gtgagcatcc 901 gatagtagcg acgccggaag aaaagaccca aagacgtcgc tccacattct atgtacctct 961 ggtaatagaa gacgaagaag aggggtcaag tcaagatcat catctggttg ttcagaaatc 1021 ctccagcaac accagtctca gtagcaatag caattctttg accaattctt ccgaaagcaa 1081 atcttcgaaa agctatagtc ttcggaaatc gagttccgtg aagagcggcg tggccaaggt 1141 tagtgctctc ttcgaacgga agacgacgag cccatcgaaa ccccaaataa tgtctccccc 1201 gccgccctgc ggcttcaact ggagcatcag tggcagcgag acggcggccc agtattccga 1261 ttccgatgag gacgaggaga actcatcgga ggcccgtcat cgggagcagc tgctgaagtc 1321 cctgcctacc ggtaataata atacccaaac cgcctcccca tcgaaactca agagatatgg 1381 tatagtacta aacgtgatca gtttgaatgg cagcgataat gaacagggtt ctttgggtag 1441 tactacaaca ataccatcca ataccaatct tttaccaaat acgggtatta cggcaccccg 1501 cactcatttc aatgaggaga acgatattgt cttggccacg cccccgccgc ccaagaagaa 1561 tagtcaggag tgcaacgatt acgacgatga ttcagagatc agtcgcatgc aaacgaacac 1621 ctcgacgccc ataaagctaa tgaaatcgcg atcgcgaacc aatatattgg ccgtaccgct 1681 gccctctgtg gagcggggtt tggctacctc atcgatggga agtactaccg gtaccagtac 1741 cagtaccagt actacgacta ctacgacaac gctgattacg ctccgtgcta aatcgaagac 1801 cctgccgcaa aacctatcgc cctcagttgt tttgcgcgag gcagccgctt tggatgagct 1861 ggaaaagaag cgggaaaagt atcaggaaaa gcaggagaag ctgcaggaaa agcagcgtca 1921 gctgtttggc ggcagtacgg tcagtcagat agtgggttcg agttcaggat cctcgcctta 1981 taaactgcaa aacagctgct cggccacgtc catactgacg cacagtttcc cgccgaaaaa 2041 cctctttcta ctaaagtcca caccaaaact atccgcggat atagctgttg ctccaccaaa 2101 tacctcggtt atttgctcgc ccccaaagaa atccctcagt ttcatccgaa gagcccactc 2161 caccaaggtg tcgcgaagta actccctgct gaaaccgaac caaagtggat tactgggatc 2221 gggaagtggt attgcaagtg gactatctgt aaatccttct tcggtcaaca tgcagggatc 2281 ctcatcgcta tcgactagct gtgccggagg aggaggagga tcggattcga ccagtaataa 2341 tggaagttgg ggcaaacact tttaccagcc ctacgatgtg tgtcccctga gtttggacga 2401 gctcaattgc tatttccagg ccgatcattg cgaggaactg atctgtgaac gcttcaagat 2461 ccgggatctg gccatacata tggcatccgc atccgcaact ggagcggatc tatcggtaac 2521 taccgagaat gagaacgaga caacgacaac ggcggcggag gacgatgcgg gacatcattc 2581 cgatacttcc tatgagaagg cgtgccgccg tggatcagcg cccactacgc cgattttggg 2641 cagcaaacag caccagtcgg agaacaatgc cacctcgcga ttcaccaact tcttttccaa 2701 aaaatccaat cccctgaagc ggaccaagtc ggtgaccaaa ttggagcgta ccaagcgcgg 2761 atccggcgga ctgaggggct cccgctcgca cgagagtctg ctgtccagtc acgccgtcat 2821 gtcgaccata gatctctcct gcactggggc ggtgggcgtg gcgccggtgc accagtcagt 2881 cctcgggcgg cgtcactgct ttcaggtgcg cggcgggccg cgtggcgagc gctactactc 2941 gtgcggatcg cgccaggagc gcgatctctg gatctactcg ctgcgcaagt cgatagcccc 3001 gaatgccgag cacactcgcc gcacggacaa ctcgctgaag atgtgggtct acgaggcgaa 3061 gaatctgccg ccgaagaagc gttacttttg cgaactgcag ctggacaaaa cgctctacgg 3121 gcggacgtcg gtgaagctgc agacggatct gctcttctgg ggcgagcatt tcgatttccc 3181 cgacatccca gagatcaatg tgatcacggt gaacgttttt cgggaggtgg acaaaaagaa 3241 gaagcgggac aagtatcagt ttgtgggttc agtgaagata cccgttcacg atgtgacctc 3301 gcgagtgccc tgcgagcaat ggtatcccat actcagcgac aaggcgggcg atagtctggg 3361 cagaacttct ggaggtggtg gatcgagtgg ttcgaaggac aaggagcaac tgcccacgct 3421 gaggatcaag tgccgtttcc agagcaccga catcctgccc atcaatgtgt atgccaactt 3481 tttggcctat ctcaaggaga actacaagag agtttgcgaa actctagagc ccgtgattgg 3541 tgtgaaagcc aaggaggata taggacaggc actggttctc ctcatgcatg cccagggatt 3601 agccggagcc tttctcaccg atgtggttgc cctggattta ctacgcgtcg gtgatcagcg 3661 actgactttt aggggcaact cgctggccac caagagcatg gaggcgtttc tcaagctcac 3721 cggcgagcag tatctgcagg ataccctctc ggcgccaatt aacgaactca tccaatcgga 3781 aagggattgc gaggtggatc ccacgaaggc gagcggttcg tcggcgggtt cactgcagcg 3841 tcagcaggcc gctttgcgtg gagcggtgcg aggggcgtgg cagtgcatct tcgagtcgca 3901 caagcatttt cccgcccagc tgcgtaattg ttttgccacc ttccgggagc gcctgcaaca 3961 attgggccgc caggatatgg ccgacaacct gatctcggcc agcatctttc tgcgtttcct 4021 gtgccccgcc atcctgtcgc cgtcgctttt taatatcacc agcgaattgc cctccgcaag 4081 ggccactcgc aatctcactt tggtggccaa gaccctgcaa acgttggcca atttcacgag 4141 gtttcagggc aaggagaact ttatggagtt cctgaatgat ttcctcgaac aggaggccgc 4201 tcgcatgcag cagtttctgg agattatatc gacaaggccc gagcatcctg ctcccgattc 4261 gatactcgat tgggcggggt acattgatca gggcaagcag ctctccattt tgcacagcct 4321 gctcagcgag agtctggcca agctgccgga ggccaggcag cacgagttgg atccactgca 4381 gcacattctc gacgagatta gccgggccaa ggagcatggg aatctgggaa cagctctgcc 4441 tggaggatat ctgccggcct cctcctcgtc gacgcactcg atagccagcg agaatcagga 4501 gaatcgacag ccggccaatc cggatcagtt gctgttgcag cagcagcaaa gtcagctggc 4561 ccagccgcag catgcgattg tcagcaagcc tctgtcggcg gagaggggca ttatgcgggg 4621 agttctgacc ccgaattctt tagagaagaa catctttcgg tacaatgatc ccacggttaa 4681 tggggtattg caacagcagc agttgcaaca gcagcagatg cagcaacagc agttgcagca 4741 gcatccccat catcattcac aaacctccat tgcgggaaac caatacctaa gttcgccggg 4801 cggcctgcag catgcccaat cgcagacctc gatggcctcc tcctcgctca acggcagcag 4861 cagcaatttg ttgcatcaac agcaacagca acatgtccac cccatgcagc atccacatta 4921 ctgcccgccg gcgccgcaga cgagtgcctc cagcaccatg gagcgaatga atccgtatcc 4981 ttatttagcg cataatggca acgagtacga ggccagcacg ccatcgagca ctcgcagcag 5041 gacactgcca cgaaatggaa atggaagtgg tcatcccatg ggcaataata accagagcgg 5101 aagctacgac gacatgcacg gcgagttcca gatacagatt tccggattgg atacgagcag 5161 tgcttttgtt tgcaagtcac ccacgcccat gatgaagtcc agtttggttg gaggagcaag 5221 tcaggctggt ggaggagcaa gaggccacca caagctgaat ctaggaatac ccgatcattc 5281 gggggtttat gtaagaggcg gctgcctgaa tcccaactcg aatatgccca agaacctgga 5341 ggatcttgac gatctgttca agtacgccga agagcacgat gtggcggagc atcaccagca 5401 cagccaacag aatcatcagc agaatcacca gcagcagcag agtcacctga agccaaatcc 5461 aggattacca cccggcaagg agcagctgtc ggcgaagagc agccactgca gctccggcta 5521 ccagagcatc tccaccaatc cctcgccctc gcagtcctcc agtcccgtgg agagccagct 5581 gaaggcagcg atgggcagtc acaatgcgcc gctggccttc aagaatccct cctaccagct 5641 gcagccgagt caggcgggca gatcatcggc acctagtaat ccccagcaac agtttggcag 5701 ccgcttaaag cccattggag gtggcctagt ggccgctaga gcagcttttc tcaacagcgg 5761 tggcaacctg gagacggcgg cggctacact gacgcccagt tcctcggacg aacagctctc 5821 ggcggataac tatttcagct atgcagcggc agcggcggcc ggagcgggat tgtccgggaa 5881 gatggaggca cagcgctcgc tcagcggcgg cagcagctcc tccacttcgg cctctgccgc 5941 atccacctca aatctgggca agaatggcgg gggttcaacg gcctacgggc ggctaaatgg 6001 accgctcaag cgggaggatg tctacggggc agctgcagga caccatcagc agcagcagca 6061 gcagcagttg caacagcaga gggatcggga acgggatcag gaactcaagc agtatgcagg 6121 cagtgtggcg ggcagcgtgg gctcagccac ttcggcggcc cagaggcgac tgagcttgga 6181 ctcggcgcga acgctttccg acagcagcac ggatacggaa ggacactgca atcaattgca 6241 ggagggcaag cgacgcaggc agttgcgcag cagcggcggc agcggcgagg gaaagggcaa 6301 tggcaatggc aatggctacg accagaacgg ggagatccag ctgctgcagc agaccctgga 6361 cacgctctgc cacacgctcg accgcgacga ggccgagctg cgcgactcca gcgacgagct 6421 gttcggaatc cagcggccag cgggcagcgc cggcagcaat ggctcgaaca atctcagcct 6481 gcagtcggag tccaccatgc gcagcatcat cgacagcttc tttcaatcct cctgcagact 6541 catcaccatg gaggaggagc tgcggcgcga gcagctcaag atgtcgctgg cgctgtcgca 6601 caagcagcgc gtgatcgagg agcagggcca gcagatagcg gccctggatg cggccaacag 6661 tcggctgctg agcgccctga ccgccctgcg ccagcggtac gagacgcagc agcagcagca 6721 acagcagcag cagcaccaag caccaccaaa gacccagaag ccacagtgat gagcggatgg 6781 ggggcaggaa tcgaaggagg aggaggagga ggaggaggag aagtcctgga caaactgaca 6841 agcatgcgga caccgtctta aggatacctt tttgtttatt ttttttagct attttttttc 6901 gtatgctaca taaattatac tacatgttta atatatagtt acacataaca atacatacat 6961 tatacataat ttctcaatat atgtttaaaa accaaccaca aaatgtgaaa ataatgctaa 7021 acgcagctgc aagagcagtg agataaaaac cccagaagat cggagcatgg aagtgaagaa 7081 gaaacaagaa caagttaaga taatgaataa aattataacc aaagttagac aaaaatgaga 7141 aaaagctt