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LOCUS XM_017140568 1487 bp mRNA linear INV 09-DEC-2024 phosphatase 2A activator (LOC108056686), mRNA. ACCESSION XM_017140568 VERSION XM_017140568.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140568.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1487 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1487 /gene="LOC108056686" /note="serine/threonine-protein phosphatase 2A activator; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056686" CDS 105..1439 /gene="LOC108056686" /codon_start=1 /product="serine/threonine-protein phosphatase 2A activator" /protein_id="XP_016996057.2" /db_xref="GeneID:108056686" /translation="MMSDRLGYDVTDPTVQVLRSSAFMQNGPVKQVRSLEDLDRWVRS QAYHDTIAYINHTSRAIQGHRMSRNRESRNFDFPVSEQMRRLCEIFDGLDHLLIEHTP KPEDSDPVSYKTWMQQMFQHVFSKLDEAIRSNCKHINELGQYLRRSFGNVTTMDFGPA NELMFVFFLCGLFRAGILLAGDTIAAALMLYNRYIHLVRRLVATYSLPLVKDPMSSID DYCLLPYLWGAAQLSLDSPFSPMQCEQQQVQRQQQDYMMLELVEHLQRSRSGQLSQVA FQLWSLLSVPTWPQVYRGLERNYIDTVLCSFQTLEQAIFCELMSFEPAMPPGNQLERA YLGAQYLERHNQEEEENAEEQANLWEPSPPVSRYVSMEPESFLGFQEPSAFQPKTKSK SKANEKEDSEEDQRFWMLRQVVDEKDPNNAMFFPDRAVNQNDSVTSFATEGP" misc_feature 186..1067 /gene="LOC108056686" /note="Phosphotyrosyl phosphate activator (PTPA) protein; Region: PTPA; pfam03095" /db_xref="CDD:460802" misc_feature order(411..413,429..431,564..566,720..725,741..743, 750..752,762..764,903..905,909..914,924..926,1035..1037) /gene="LOC108056686" /note="peptide-induced dimer interface [polypeptide binding]; other site" /db_xref="CDD:239754" misc_feature order(564..566,570..572,576..587,741..746,756..764, 768..770,948..950,957..959,975..977,987..989,996..998, 1008..1010,1020..1022,1026..1031,1035..1040) /gene="LOC108056686" /note="putative interaction site [active]" /db_xref="CDD:239754" misc_feature order(564..566,570..572,576..587,744..752,1026..1031, 1035..1040) /gene="LOC108056686" /note="ATP binding site [chemical binding]; other site" /db_xref="CDD:239754" misc_feature order(924..926,957..959,984..986,996..998,1020..1022) /gene="LOC108056686" /note="putative PP2A binding surface [polypeptide binding]; other site" /db_xref="CDD:239754" misc_feature order(933..938,945..950,957..959,984..989,1017..1028) /gene="LOC108056686" /note="peptide binding pocket [active]" /db_xref="CDD:239754" polyA_site 1487 /gene="LOC108056686" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggtcgtggcg gttgattcga aagcattccg acctataccc atttcgacac gaaaatacac 61 aaatagtctt tgatttgatt tcccatctca tccgatccca tttgatgatg agcgaccgac 121 tgggctacga tgtgaccgat cccactgtcc aggtgcttcg ttcctcggct ttcatgcaga 181 acgggccggt gaagcaggtt cgcagcctgg aggatctgga ccgatgggtg cgatcgcagg 241 cctaccacga tacgatcgcc tatatcaacc acacaagcag ggcgatacag ggccatcgga 301 tgtcgcggaa tcgggaatcg cgcaactttg acttcccagt ctccgagcag atgcgtcgcc 361 tgtgcgagat cttcgatggt ttggaccacc ttctcatcga gcatacgccc aagccggagg 421 attctgatcc tgtatcctac aagacctgga tgcagcagat gttccagcat gtctttagca 481 aactggacga ggccattcgc tcgaactgca agcacatcaa cgaactgggg caataccttc 541 gccgttcctt cggcaatgtg accaccatgg acttcggacc cgccaacgag ctgatgttcg 601 tcttcttcct ctgcggcctc ttccgggccg gaatcctcct ggccggcgat acgattgccg 661 cagccctgat gctttataat cggtatatcc atctggttcg ccgcctggtg gccacctact 721 cgctgccgct ggtgaaggat cccatgtcct ccatcgatga ctactgcctg ctgccctatt 781 tgtggggtgc cgcccagctc tcgctggata gtcccttctc gccgatgcag tgcgagcagc 841 agcaggtcca gcgacagcag caggactaca tgatgctgga gctcgtggag catttgcagc 901 gatcgcgcag tggccagctg agccaggtgg ccttccagct gtggagcctg ctctcggtgc 961 ccacctggcc gcaggtctat cggggattgg agcgaaacta tatcgacacg gtgctctgct 1021 cctttcagac cctcgagcag gccatcttct gtgaactcat gtcgtttgaa cccgccatgc 1081 caccgggtaa ccagttggag cgggcctatc tgggggcaca gtacctggag cggcacaacc 1141 aggaggagga ggagaacgca gaagagcagg ccaatctttg ggaaccatcg ccgccggtca 1201 gcagatatgt gagcatggag ccagagtcct ttctcggctt ccaggagccg agcgcctttc 1261 aaccgaaaac caaatcgaaa tccaaagcga acgagaagga ggacagcgaa gaggaccagc 1321 gattctggat gctgcgacag gtggtcgatg agaaggaccc gaacaacgcc atgttctttc 1381 ccgatcgcgc agttaaccag aatgactctg tcacctcgtt tgccaccgaa ggtccctgaa 1441 atgtcaaacc agttaataca gataaacttg taaggatcga agcgaaa