Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017140287 3299 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017140287 VERSION XM_017140287.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140287.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3299 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3299 /gene="Grp170" /note="Grp170 co-chaperone; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056477" CDS 184..2922 /gene="Grp170" /codon_start=1 /product="hypoxia up-regulated protein 1" /protein_id="XP_016995776.2" /db_xref="GeneID:108056477" /translation="MKLVLLLSALLAGIALSRGAAVMSVDLGSEWMKVGVVSPGVPME IALNRESKRKTPAILAFRDGVRTIGEDAQTIGIKDPNSAYGYLLDLLGKTIDNPIVDL YRKRFPYYNIVGDPERNTVIFRKSDTEEFSVEELVAQMLVKAKQFAQESVQQPITECV LTVPGYFGQAEREALLAAAQLANLKVLQLINDYAAVALNYGVFHRGEINETAQYFLFY DMGAYKTSAAVVSYQLVKDKQTREVNPVVQVLGVGYDRTLGGLEIQLRLRDYLAKEFN ALKKTKTDVTKNPKALAKLFKEAGRLKNVLSANTEFYAQIENLLEDIDFKLTVSREKL EQICEDLWPRATKPLEQALASSHLSLDVINQVILFGGGTRVPRVQETIKALIKQELGK NLNADESATMGAVYKAADLSAGFKVKKFVVKDATLFPLQVSFERDPGDGAAVKQVKRA LFSLMNPYPQKKVITFNKHSDDFEFFVNYADLDRYSQEEVAALGSLNVTRVQLSKVKE LLEKSKKELVENKGIKAYFYLDDSGIFRCTGVEYVYEKQKEEEESSSDEDSTLSKLGS TISKLFTKEGEEEGEKKEDEEAAASEEPEKPKEEEPKQEDASKQEAEAKNDTIKLVTV KSPVTYESHTQFTVPLAGEGYNNAVAKLAAINKAEEQRVRLESAFNSLEAHIIEVQQK LEEDSYAKCVTAEEKEKLLAECSSLGEWLYEDLEDPKAEIYEEKLAQLKKLSNVFLAR HWEHEERPEAIKALKGMIEGAEKFLLTGRNLTKDTNPEKDVFTQVEIDTLAKIISETN AWLKTETAAQKKLAKNAEIRLTVKDITDKMSLLDREVKYLVNKIKIWKPKVKPVAAEK KKEEEPVASGSGDGTKEATEEQQDQQEQPEKEKPVEEITPTPTEEAEDAKTPHSEL" misc_feature 244..1410 /gene="Grp170" /note="nucleotide-binding domain (NBD) of hypoxia up-regulated protein 1 (HYOU1) and similar proteins; Region: ASKHA_NBD_HSP70_HYOU1; cd10230" /db_xref="CDD:466828" polyA_site 3299 /gene="Grp170" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctgcttctt cttcctcgtc gcggcgactc tgttttttat tccattcccc acaaatccaa 61 tcgctcgctc gacgttccga atttgtgaat tagtgaattg ctgtggtgaa taaaagtcga 121 ttggattggc cagtggaaag tcgcgaagga cagctggaag cgacgaacaa aacgggacac 181 accatgaaac tggtgctctt gctgagcgcc ctgctggcgg ggatcgccct ttcccgaggc 241 gccgccgtga tgtccgtgga cctgggcagc gagtggatga aggtgggcgt cgtgtcgccc 301 ggcgtgccca tggagattgc cctgaaccgc gagtccaagc gcaagacgcc cgccattctg 361 gccttccgcg atggagttcg cacgattggc gaggatgccc agacgattgg catcaaggat 421 cccaattcgg catatggcta tctcttggat ttgctgggca agaccataga taatcctatt 481 gttgatttgt atagaaaacg ctttccctac tacaacattg tgggcgatcc ggagcgcaat 541 acggtgatct tccggaagag cgacaccgag gagttctccg tggaggagct ggtggcccag 601 atgctggtca aggccaagca gtttgcccag gagtctgtcc agcagccgat caccgagtgc 661 gtactcacgg tgccgggtta ctttggtcag gcggaaaggg aggctctcct ggcagccgcc 721 caattggcca atctcaaggt gctccaactg atcaacgact atgcagcggt ggccttgaac 781 tacggcgtct ttcatcgcgg cgaaatcaac gagacggccc agtacttcct cttctacgac 841 atgggcgcct acaaaacctc ggccgcggtg gtcagctatc agttggtgaa ggacaagcag 901 acgcgcgagg tgaatccagt ggtccaggtg ctcggcgtgg gctatgatcg cacgctggga 961 ggtctggaga ttcagttgcg tctgcgcgat tacctggcca aggagtttaa tgcgctgaaa 1021 aagaccaaaa ccgatgtgac caagaatccc aaggctctgg ctaagctttt caaggaggcg 1081 ggacgcctaa agaacgtgct ctcggccaac acagagttct atgcgcagat tgagaacctg 1141 ctggaggata ttgactttaa gttgacggtg tcacgcgaga aactggagca aatttgcgag 1201 gatctgtggc ccagggccac caagccactg gagcaggctt tggcctcctc gcatctcagt 1261 ttagatgtaa tcaaccaggt gattctgttt ggcggcggca cgcgagtgcc acgcgttcag 1321 gagaccatca aggcgctgat caagcaggag ctgggcaaga acctcaatgc cgatgagtcg 1381 gcaaccatgg gcgccgttta caaggcagcc gatctctcgg cgggctttaa ggtgaagaaa 1441 tttgtggtca aagatgccac gctgttcccc ctgcaagtct ccttcgagcg ggatcctggc 1501 gatggagccg ccgtgaagca ggtaaagcgt gctctgttct ccctgatgaa tccttatccc 1561 cagaagaagg tcatcacctt caacaagcac tcggatgact ttgagttctt cgttaactac 1621 gctgatctag atcgctacag tcaggaggag gtggccgcct tgggcagcct gaatgtgacc 1681 cgagtgcagc tgagcaaggt gaaggagctg ctggagaaat ccaagaagga actggtggag 1741 aacaagggca tcaaggcgta cttctacctg gacgattcgg gcattttccg ctgcacgggc 1801 gtggagtatg tgtacgagaa gcagaaggag gaggaggagt cgtcatcgga tgaggatagc 1861 accttgtcca agctgggcag caccatcagc aagctgttca ccaaggaggg cgaggaggag 1921 ggcgagaaga aggaggacga ggaggcggcg gccagtgagg agccggagaa acccaaggag 1981 gaggagccaa agcaagagga tgctagtaaa caggaggcgg aggccaagaa tgacaccatt 2041 aagctggtga cggttaaatc cccagtgacc tatgaatccc acacccagtt cactgttccc 2101 ttggccggcg aaggctacaa taacgcagtg gccaagctgg cggcgatcaa caaggcggag 2161 gagcagcgtg tgcgcctgga atccgccttt aactccctgg aagcccacat catcgaagtg 2221 cagcagaagc tggaggagga ttcctatgcc aaatgcgtga ctgccgagga gaaggagaag 2281 ctcctcgcgg aatgtagctc tctgggcgag tggctctacg aggatctgga ggatcccaag 2341 gcggagatct acgaggagaa gctggcgcag ctgaagaagt tatccaacgt ctttttggcc 2401 cgccactggg agcacgagga gcgaccagag gccatcaagg cgctcaaggg aatgattgag 2461 ggcgccgaaa agttcctgct gaccggacgc aacctcacca aggacacgaa tcccgagaag 2521 gatgtcttca cccaggtgga gatcgatacg cttgccaaaa tcatcagcga gacgaatgcc 2581 tggctgaaaa cggagacggc ggcccagaag aagctggcca agaatgccga aatccggctg 2641 accgtcaagg atatcaccga taagatgagc ctgctggatc gcgaggtcaa gtatctggtg 2701 aacaagatca agatctggaa gcccaaggtg aagccagtcg ccgcggagaa gaagaaggag 2761 gaggagccgg tggcctccgg cagtggcgat ggcactaaag aggcgacgga ggagcagcag 2821 gatcagcagg agcagccgga aaaggagaag cctgtggagg aaatcacgcc gacgcccacg 2881 gaggaggcag aagatgccaa gacaccgcac agtgagctct aaggagccag cgattatgga 2941 ggattacaaa gagaagtgcc tgttctaggg ggtcaaacac gggggaacaa gacgggcgtc 3001 ttaatttcta tgattttttt agctaaagtc ggggttaaat tatgctactt ctaatctaaa 3061 acaagaaaca aaaaaaaaaa cacaaaatcc acacacaaaa taatgtaaaa ccgttactaa 3121 aatgtataaa ccactttcca tttccgtacc attccgcatg ggaaatacaa gacttgaaga 3181 agtactcaca cggtcccctc tatatatcca ctatatatat cttatcgaac cattgtagcg 3241 aaagtagcca aaccaattgg gcggggagcc gagttaagat cgtaataaat ctgaaatcg