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LOCUS XM_017140285 3252 bp mRNA linear INV 09-DEC-2024 (LOC108056476), transcript variant X1, mRNA. ACCESSION XM_017140285 VERSION XM_017140285.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140285.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3252 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3252 /gene="LOC108056476" /note="ubiquitin-conjugating enzyme E2 Q2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108056476" CDS 785..1978 /gene="LOC108056476" /codon_start=1 /product="ubiquitin-conjugating enzyme E2 Q2" /protein_id="XP_016995774.2" /db_xref="GeneID:108056476" /translation="MACLNTLKQEIKTLEKIFPKNHERFQILNSSVDELLCRFIDKNG KRYDIHANITETYPSSPPVWFAESEETSVTNAVQILSNTNGRDNHVINQVGILLRELC RLHNVPLPPDIDNLALPLQTPPPSASPLRCEQRPGGGGAGGGGGPHGNEETDSDQEEI EDPIGESEQESEGDEDLPLEMDDVRSTNKKDDMEVEHLATLERLRQSQRQDYLKGSVS GSVQATDRLMKELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLLM LKEKEGKDSILLNILFKETYPFEPPFVRVVHPIISGGYVLIGGAICMELLTKQGWSSA YTVEAVIMQIAATLVKGKARIQFGATKALTQGQYSLARAQQSFKSLVQIHEKNGWFTP PKEDG" misc_feature 1457..1936 /gene="LOC108056476" /note="Ubiquitin-conjugating enzyme E2, catalytic (UBCc) domain of ubiquitin-conjugating enzyme E2 Q1, Q2, and related proteins; Region: UBCc_UBE2Q; cd23802" /db_xref="CDD:467422" polyA_site 3252 /gene="LOC108056476" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgttttggct agctaacaac aataatacaa aagttaagaa caagccaagt gaaatgaaac 61 tgaaacacgt gtttaaaccc cgatttgcag ccaaaaagcc caggaaaagc caacaaacaa 121 atatataaac tgagcactga aaaagaaaag caaagaaaaa acggtaataa gtcgggaaaa 181 tcaaagtgca aaactgaacg ccaaaaaaac gagcggagag tgcgagcgag acagcgcatg 241 ctgggcgccg caggagctga agaagaagaa gaagcagtga gagtgaagtt aactggaagt 301 ggagtggaaa gaggagagcg agcgagagga gaggagagcc agcggaaggg aaacaacaaa 361 gaacgacggc gacggccaaa agaaaaagtc gcctttccaa tctacctcga aacacaagca 421 aatcgttatt ctaaaaagca caataactaa aataaacacc aaaatataat ataaatatac 481 tggtagaaga ggaagcagcc acttgacaaa aaggaaaacg caacagcagc gccatctagt 541 gtcggcgagt cgaagcagca gctgacagac agaaagagac cgcaaagagg ggagcgaaca 601 acaaatacaa atacaagctt tcttcgcctg gaagtcgcag aggaggaacg acagagaggg 661 gggagtcggc tcccgaaaaa ctccatttgg accacaaaaa tataataatc atcatagtag 721 ccaagtagag agcccagaaa aagaagacca gaccagacca gttgcctttt tagcccgcca 781 caagatggcg tgccttaaca ccctgaagca ggaaatcaaa acgctggaga agatcttccc 841 gaagaaccac gagcgctttc agatcctcaa ttccagcgtc gacgagctgc tctgtcggtt 901 catcgataag aatggaaagc gctacgatat ccatgccaac ataacggaaa cgtatccctc 961 atcgccgcct gtttggttcg ccgaaagcga ggagacgagc gtcacaaatg ctgttcaaat 1021 acttagcaat acaaatggac gtgataatca cgtgattaat caggtgggca tactgctgcg 1081 tgagctgtgc cgactacaca acgttccact gccacccgac atcgataatt tggccctgcc 1141 gctgcaaacg ccgccgccat ccgcttcgcc actccgctgc gagcagagac ccggcggcgg 1201 gggagcgggg ggcgggggcg gaccgcacgg caacgaggag accgactcgg atcaggagga 1261 gatcgaggat cccattggcg agagcgaaca ggagagcgag ggcgacgagg atttgccgct 1321 ggaaatggat gatgtacgaa gtacaaacaa gaaggacgac atggaagtgg aacacctagc 1381 aactctagaa agactgcgtc aaagtcaaag acaagactat ctaaaaggtt ccgtttcggg 1441 ctccgtgcag gcaaccgatc gcttgatgaa ggaactacgt gatatttatc gatcggacgc 1501 cttcaagaag aacatgtatt caattgagct cgtcaacgag tcgatttacg agtggaacat 1561 acgcctcaag tctgtcgatc cggacagtcc gctgcacagt gatctgctaa tgctcaagga 1621 gaaggagggc aaggacagca tactgctcaa tatcctcttc aaggagacgt atcccttcga 1681 gccgcccttt gtgcgcgtcg tccatccgat aatctcaggc ggctatgtgc tcatcggcgg 1741 tgccatctgc atggaattgc tgaccaaaca gggctggagc tcggcctaca ccgtggaggc 1801 ggttatcatg caaatagcag ccaccctggt caaaggaaag gcgcgcatcc agttcggggc 1861 caccaaagca ctgacccagg gccaatatag cttggctcga gcccagcaga gcttcaagtc 1921 tctggtgcag attcacgaaa agaacggctg gttcacaccg cccaaggaag atggctaaga 1981 tagaagagtc cccagacgca catcctttat agaataacgc atgccacaac cagcacacat 2041 ccatcagcca ccagcattac cttatccaca ccacccgcca agcccaagca cacacaccta 2101 ccgcactcac tgccggttcg ataaaaccat atggacggag cccccgaact cgaggagaag 2161 gcccactttg ttttgcttgc ttgcaacgtg gatggaacca tccgcatata attaagttta 2221 acgtgtatac cttagacaca cttttgtatc cacggttgct ctttttttcg ttgcaagtaa 2281 attcatttgt atatgcgccc cactcgacgt ttaatgtagt gtagtgtgta gtcagtcgtc 2341 ttctaaccaa atccaaatcc aaatcccgcg gcctgaaatc gtccatcttg tacagagtct 2401 tggaaactgg agctgattaa gtgaatatcg cagcagaggt agcagactaa tcagcggacg 2461 aacggtgtaa aatgtaaagg caatatctgt tatgtatatg aatataattt gtaatttaaa 2521 tattgtaaat gtagtggctt cgaaaacctt ccaaacacaa cccccgcaca caccacacac 2581 accatacaca cacacacgcg cctaaaatgt aaactagtta agacgcctaa ctgtattctt 2641 attttaattt aacaaatccg tggtatctta tattttttct ccctaactta actggtaagc 2701 aaccgaaaac aaaaaacaaa agaaacggca agttggcaag agagttgacg caatgtcgag 2761 cggaatagat atatatatat acctatacat acatataaat ataaatatac ataaatataa 2821 agatatatat taatattagc gcgagagttt agcttaagca gaataataca gaacgatgcg 2881 tcgaggatga gcaaattcta agtgtaaatt cgtctttcca aataatcgta aaataacgta 2941 aatctaaatc tacaaagaga aaaacaaaca ttacaaataa aaacaagcta aatcgagtag 3001 ttggagaacg aaaatcgaaa atatttgcaa gtgtaatatg cattaaagta aagcaaaagc 3061 aaagaaaatg aaaacaagag ttaatttgag gacaactgtt ttgctgtccc cattatcatt 3121 gtttttttat tattcgtaca acggcagaca aaatttcatt gtacatttca aaacggaaat 3181 tggcatgcac gacgaaatgt tcattttaag tatgtattta ataaagaagg atatatacat 3241 gcataatacg ga