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LOCUS XM_017140284 1861 bp mRNA linear INV 09-DEC-2024 protein 15 homolog (LOC108056475), mRNA. ACCESSION XM_017140284 VERSION XM_017140284.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140284.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1861 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1861 /gene="LOC108056475" /note="U3 small nucleolar RNA-associated protein 15 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056475" CDS 105..1724 /gene="LOC108056475" /codon_start=1 /product="U3 small nucleolar RNA-associated protein 15 homolog" /protein_id="XP_016995773.2" /db_xref="GeneID:108056475" /translation="MQNNNFLPLNTRRFQQRAQVETPDTVYWNRLAKPELVKEHNTID YVDFSPSDPDNFAVTCSVRVQIYNLVTKLVVKNLSRFQKTAYGATFRQDGRLLAAGDE EGHVKLFDTTSRNILRLFKGHTAPVHRTQFTADKLQLASFGDDKAIRLWDVANEKVVQ TYGDVHTDYIRAGAMHPQTSHMFVSGGYDGKINLYDTRAETAVQRTLDHGAPVESMLF LPHGSIFVSAGGSQVRVWDLISGCRLLTMMSQHHKTVTCLRLGSDGRRLFSGGLDRHV KIYDVSTYKTVHTLTYPNAVVSLGVASGDQAVVAGMVDGLVSIRRMIVDSKPSHLKKI RADRASKQFRELRRPNNSQDVDHTVRERAKGTGLQRYDVHLRGFNHKKALDEVMAKAK MEKKPELVVAVITDLLHRRSLDKALTDRPDAMLVRFINFVCTHLGEVRFMRPLMMAAS TILDVCERQLVAYSQQLIVALERLAAAVRAEVKLTAELMRLKGAMDMLIGVSMDNGEV AHRPAYSEAKAPKMQPSSAAESYVVGKVQVE" misc_feature 120..1055 /gene="LOC108056475" /note="WD40 repeat [General function prediction only]; Region: WD40; COG2319" /db_xref="CDD:441893" misc_feature 366..470 /gene="LOC108056475" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 483..593 /gene="LOC108056475" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 615..725 /gene="LOC108056475" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 741..848 /gene="LOC108056475" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 867..971 /gene="LOC108056475" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 990..1061 /gene="LOC108056475" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1161..1598 /gene="LOC108056475" /note="UTP15 C terminal; Region: UTP15_C; pfam09384" /db_xref="CDD:462782" polyA_site 1861 /gene="LOC108056475" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tctggtaaca ctgattcgcg gcagtttctc tggcggagta gaacacgtgc gcgcgaaagg 61 agattgacta gattcaggac tcagattcat attcagattc caggatgcag aacaacaact 121 tccttccact gaacaccagg cggtttcagc agcgggcgca ggtggaaacc ccggacacgg 181 tctactggaa ccgactggcg aaaccggagc tcgtaaagga gcacaacacc atcgactatg 241 tggacttcag ccccagcgat ccggacaact ttgcggtgac ctgctcggtg cgcgtgcaga 301 tctacaatct ggtgaccaag ctggtggtga agaacctctc gcgcttccag aagaccgcct 361 acggggcgac cttccgccag gacgggcgcc tcctggccgc cggcgacgag gagggccacg 421 tcaagctgtt cgacaccacc agccgcaaca ttctgcgcct cttcaagggc cacacggccc 481 cagtgcatcg cacccagttc acggcggaca aactgcagct ggccagcttc ggggacgaca 541 aggcgatccg gctgtgggac gtggccaacg agaaggtggt ccagacctac ggcgatgtgc 601 acacggacta tatccgtgcc ggcgccatgc atccgcagac ctcgcacatg ttcgtctccg 661 gcggctacga tggcaagatt aatctatatg acacgcgtgc agagactgcg gtgcagcgca 721 ctttggatca tggagctcct gtggagtcca tgctgttcct gccccacggc tccatcttcg 781 tcagcgccgg cggcagccag gtgcgcgtct gggatctcat cagcggctgc cggctgctca 841 ccatgatgtc gcagcaccac aagaccgtca cctgcctgcg cctgggctcc gatggccggc 901 gactcttctc cggcggcctg gatcggcacg tcaagatcta cgatgtgagc acctacaaaa 961 ccgtgcacac gctcacatat cccaatgccg tggtcagcct gggcgttgct agcggggatc 1021 aggccgttgt ggccggcatg gtcgatggcc tggtctccat acgccgcatg atcgtggaca 1081 gcaagccgag tcacctgaag aagatccgtg cggatcgggc cagcaaacag ttcagggagc 1141 tgaggcgacc gaacaacagc caggatgtgg atcacacggt gcgggagcgg gcgaagggaa 1201 caggactgca gcgatacgac gtccatctgc ggggatttaa tcacaagaag gccttggatg 1261 aggtgatggc caaggcgaag atggagaaga agccggagct cgtggtggcg gtcattacgg 1321 atctgctgca tcgcagatcg ctggacaagg cgctcaccga tcgaccggac gccatgctcg 1381 tgcggttcat caactttgtg tgcacccacc tgggcgaggt gcgattcatg cgtccgctga 1441 tgatggccgc cagcacgatc ctggatgtct gcgaacggca gctggtggcc tacagccagc 1501 agttgatcgt ggccctggaa cggctggcgg cggccgttcg ggcggaggtc aagctgaccg 1561 ccgagctgat gcgactgaag ggcgccatgg acatgctgat cggcgtctcg atggacaacg 1621 gcgaggtggc ccatagaccc gcctattcgg aggccaaggc accaaagatg cagccctcgt 1681 cggcggcgga gagctacgtg gtgggcaagg tccaggtgga gtgacccaga agatccactt 1741 cctcgttcag tgatccggac gattagtctt agatagaatt ccctcgggtt atcttaagta 1801 gctattagtt aatattatga ttttttttct accaacttta agattaaagc tgtgcaaaca 1861 a