Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017140279 5001 bp mRNA linear INV 09-DEC-2024 (LOC108056473), transcript variant X2, mRNA. ACCESSION XM_017140279 VERSION XM_017140279.2 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Oct 18, 2021 this sequence version replaced XM_017140279.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5001 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5001 /gene="LOC108056473" /note="proline-rich protein 36; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108056473" CDS 660..4490 /gene="LOC108056473" /codon_start=1 /product="proline-rich protein 36" /protein_id="XP_016995768.2" /db_xref="GeneID:108056473" /translation="MSSMKGGFSTLNRWFGRKKDKSGTGSSSMGKLSKSSTQLHHLST DTDLNETSQLEYNRITPVPAATSNAPFEQTFRITVLLPKEQLFVARLGARVPLSKLLS LVCDNKQLDADKYEFRSPVDASQVYSCESTIGAVGLSEIRLCHKSESYDTFNPDVMHK FQRTGAARDSLSSSSDFSSSRHSKVTAKTPSPYSSSNSLNSMDSTGMNYTRTPVVVPP AKVLAPPPRKKRTAPRPPSQICIPEQSVPDIPASEPAYAVIVKRPQLCMSTPNLSGPP ELDCNGNSSAKSPDADSTDGHYATLELKPPVAGGPEPTPRKRLLQIKKKTAPAPPPDF QSGGDNISLASLPLPEAVTTPNIPQPAPRITTPLPIAPAVNPPLPFVNGNGSPPPTNG NVSKVLLNRTPTPEPRSLGSAAEDDDNDAASKQADSGIGEPAPSPSASPEPEAEEKSQ QESSSEDDEAIKVYNFKLCQTTKQNEPTSLAELAVLTAQEEEEQEEQVQPPLTNGTPL SETSITSWNYSVPISPPPDFSDPKMQKLKGSASPGSPLDEIVDELATIINQQRLDTLI KKQPDPRLAEIEAPKPNRLANFSIATATAKIGRADSFQAVGGGGLGGGGSEEVTSLSL RSSSHLSLNKLEQQQNGISGLGTRRSSSELSIGESPSLQSLEVIKTILNSRKNSLAES GGSASSSLSSPVTEQPKIIEKVEGLEKLAKEESSVEEEVVTKQSSATPVQKQSTPTTP SPPAVEKLLSYPVEKPSASPVEKSLPSPVQKQSIPSPSPAVEKSSPYPLQKQSTPPAV VKPSPNPVQKQSTPPPSPAVEKVLPSPVEKSSPSPVEKPSPTPIQKQLSSPVEKPLSS PVVTQQVTPLAQKQSPPVAKKPSPPVVKKMPEVSPVQVVKEEVPSSPVSPVNLRSTQP SQPIESAPSSKPLPPTYRYSGPPSINFATWSERPKSTVAIKNEGDYIFGGAGQANQRI TSQPPAKLTIEVASPILRMGIPQRKEYHVPITVKPLKDAGLEEKQEEKLEKPEVKEQP IQEETFSVQVRLKPQPKPLEKPLVQNQNQSSTLPRPAKTNRFTLPAGQSNQVVVSSLA SSNSLPRPVSSLERNRPGAVEPANPAPFGQNTLRRTGFKERMLAREQQEQEQALRIRV SGVSVNGNHTPSPAAAAAPAPATPTSPPETKPAPPAKNANVVLKSTKVELKLQEPPET RGLQIKLKSSVSQPAATPSPPPPPPVLPALKPLKARENGSGNGSGRSPTSPDPRSQLL DAIRNFKREELNRS" misc_feature <1296..2237 /gene="LOC108056473" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature <2229..>2411 /gene="LOC108056473" /note="EF-hand motif found in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) isozymes; Region: EFh_PI-PLC; cl28895" /db_xref="CDD:333715" misc_feature <2835..3956 /gene="LOC108056473" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" polyA_site 5001 /gene="LOC108056473" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcatgccgaa cggacgctca cgctgcgtcg atttctcgcg gacgaagaaa actgggggaa 61 gaattcgcca gattttgttt atttacatgc gttacatggc tctttaattg gctgcgcgag 121 tgtggacgag tgtttgaggg tgtgtgtgca aaaataattt gctttatttt ttttacactt 181 tttttttaca ttcgaaagtg cctaccgaaa tacaaaaaaa aaattaacca aaaaaaaatc 241 aagtaaaata aaaaagaaag atagaaaaga gagtgtgtgt gtgagagtgt gttaacctgg 301 gtacaggcat tatggaccga tgcatgtgaa ctgacaggaa atagagcgcc attaagccaa 361 caacagcaca tcacatcaca tcaaaaggca gttagaacca tggaaagacg cggcccaaac 421 agatttgcta attgaggtcg ttgtctagat ttcgcagcgc acaaatcgca cgccattttc 481 tagcatgctc taggaatatt acgaaaccca atcgaaattt aaaggaaaac gccgaattac 541 acacgtcaag acacgtttga aacggaagcg gaagcggaaa cggaagtagg tgaaggtgga 601 agaagcagag aacaagtgag cgagagagag ggaaacattt gagaagccac gcccacaaca 661 tgagtagcat gaagggcggc ttctccacac tgaatcgctg gtttggccgg aaaaaggaca 721 aatccggcac tggcagctcc tccatgggca agctgtccaa gtcgtcgaca cagctgcacc 781 atttgtccac ggacacggac ttgaacgaga ctagtcagct ggagtacaac cggataacgc 841 cagtgcccgc ggccaccagc aatgcgccct tcgagcagac attccgcatc accgttctgc 901 tgcccaagga acagctcttt gtggcccgcc tgggagccag ggtgccgctg agcaagctcc 961 tttcgctcgt ctgcgacaac aagcaactgg atgcggacaa gtacgagttc cggagtccag 1021 tggacgctag tcaggtgtac agctgcgaat cgacgatcgg agcagtgggt ctctcggaga 1081 ttcggctgtg ccacaagtcg gagtcctacg acaccttcaa tccggatgtg atgcacaagt 1141 tccagcgcac cggagcggcg cgggattccc taagcagcag ttccgatttc agcagcagtc 1201 gtcactcgaa ggttacggcc aaaacgccaa gtccgtatag ttccagcaac tcgctgaact 1261 cgatggactc cacgggcatg aactatacgc gtacgccggt ggtggtgccg ccggcaaagg 1321 ttttggcacc accgccgcgc aaaaagcgaa cggcaccgag gccgccgagt cagatttgca 1381 tcccggaaca gtcggttccg gacattccgg ctagcgagcc cgcctatgcg gtgattgtca 1441 agcgtccgca gctctgcatg tccacgccga atctctctgg accaccggag ttggattgta 1501 atggcaacag tagcgccaag tcaccggatg ccgactccac ggacggtcac tatgccacct 1561 tggagctaaa gcctccggtg gcaggtggtc ccgaaccgac tccccgcaag cgattgctgc 1621 agatcaagaa gaaaacggca ccggcaccac cgccggactt ccaaagtggc ggggataaca 1681 tatcactggc ctcgctgcca cttcctgaag cggtgactac tccgaatatt ccgcagccag 1741 ctcccaggat caccacacca ttgcccattg cgccggcggt taatccgcca ttgccttttg 1801 tgaatggcaa tggatcacca cctccaacca atggcaatgt atccaaagtc cttctaaata 1861 gaactcccac gccggagccc cgatctttgg gcagtgccgc cgaggatgat gacaatgatg 1921 cggcttccaa gcaagcggat tcgggcattg gagagccggc accatcgccc tcggcttcac 1981 cggaacccga ggcggaggag aaatcccagc aggaatccag ttccgaggac gacgaggcca 2041 tcaaggtgta caatttcaag ctgtgccaga ccaccaagca aaatgagccc accagtttgg 2101 cggaactggc agtgctgacg gcgcaagagg aggaggagca ggaggagcaa gtgcagccac 2161 cgctgaccaa tggaaccccc ttgagcgaga cctcaatcac ctcgtggaac tactcggtgc 2221 ccatatcgcc gcctcccgac ttttccgatc cgaaaatgca gaagcttaag ggttctgcga 2281 gtcccggttc gccgctggac gagattgtgg atgaactggc gaccataatc aatcaacaac 2341 gtctggacac gctgatcaag aagcagcccg atccacggct ggcggagatt gaggcgccga 2401 aaccgaatcg attggccaat ttcagcatag ccacggccac ggccaaaatt ggacgagccg 2461 actcgtttca ggcggtggga ggaggaggat taggaggagg aggatcagag gaggtaacat 2521 ccctcagtct tcgcagctcc tcgcatctct ccctgaacaa actggagcag cagcagaatg 2581 gcatcagtgg cctgggcacg aggcgctcct ccagcgagct gagcatcggt gaatcgccct 2641 cgttgcaaag tctcgaggtg atcaagacca tcttgaactc gcggaagaac agcttggctg 2701 agagtggagg cagtgcatca tcatcattat catcgcctgt tacagagcaa ccaaagatca 2761 tcgagaaggt ggaagggctg gagaagctgg ccaaagaaga gtcttctgtg gaggaggaag 2821 tggttaccaa gcagtcgtca gccactcctg tccagaaaca gtcgactccg actactcctt 2881 ctcctcctgc tgttgagaaa ttattatctt accctgttga gaaaccatca gcttctcctg 2941 ttgagaaatc attaccttct cctgtccaga aacaatcgat tccttctcct tctcctgctg 3001 ttgagaaatc atcaccttat cctctgcaaa aacagtcgac tcctcctgct gttgtgaaac 3061 catcacccaa tcctgtccag aaacaatcga ctcctcctcc ttctcctgct gttgagaaag 3121 tattaccttc tcccgttgag aaatcatcac cttctcctgt tgagaaaccc tcacccactc 3181 caatacaaaa gcagctttct tcgccagttg agaagccttt atcctcgcct gtggtgactc 3241 agcaggtgac tccattggct cagaagcaat ccccgccagt ggccaaaaag ccatcgcccc 3301 cggtggtcaa gaagatgcca gaggtttcac cagttcaagt ggtcaaagag gaagttccca 3361 gctcgccagt cagtccggtt aacctgagga gtacccaacc aagtcaaccc attgaatccg 3421 ctcccagctc caagcccctg ccacccactt atcgctattc ggggccaccg agcattaatt 3481 tcgccacctg gagcgaacga cccaagtcga cggtggccat caagaacgag ggagactata 3541 tctttggtgg ggctgggcag gccaatcaaa ggatcacctc gcagccgcct gccaagctca 3601 ccatcgaggt ggcttcaccc attctgagga tgggcattcc gcagcgaaag gagtaccacg 3661 ttcccattac ggttaagccg ctaaaggatg cgggtttgga ggagaagcaa gaggaaaagc 3721 tggagaaacc cgaggtcaaa gagcagccaa ttcaagagga aaccttttcc gttcaggtta 3781 gactcaagcc gcagccgaaa cccttggaga aacccttggt tcagaaccaa aatcaatctt 3841 ccaccctgcc gcgtccagcc aagaccaata gattcaccct gcccgctggc caaagcaacc 3901 aggtggtggt ctctagcctg gccagctcca attccctgcc tcgtccggtc tccagtctgg 3961 agaggaatcg accaggagca gtggaaccag ctaatcccgc tccctttggc cagaacaccc 4021 tgcggcgcac gggtttcaag gagcgcatgt tggccaggga gcagcaggaa caagagcagg 4081 ccttgaggat tagggtctct ggggtgtcgg tgaatggaaa tcacactcct tctccagcag 4141 ctgcagctgc tcctgctcct gccacgccca catccccgcc agaaaccaag ccagcgccgc 4201 cggcaaagaa tgcgaatgtg gtgctcaagt ccaccaaagt ggagctgaag ctccaggagc 4261 caccggaaac tagggggcta cagatcaagc taaagtcctc ggtatcccag ccagcggcca 4321 cgccctcgcc gccgccaccg cctcccgtac ttccggctct gaagcccctg aaggcccggg 4381 aaaacggaag cggaaacgga agtggacgca gtcccacatc accggatccg cgctcccaac 4441 tcctggatgc gatacggaat ttcaaacgcg aggagctcaa ccgatcctga gtttttgcga 4501 aaataaacat tattagataa agaaataaca agaaaaatca ggcacaaaat cacaaaagca 4561 gcgcacaagt tatatatttt ttaaaccgtt aacagtaaat tttgtgttga gtttgtaaat 4621 aatttcgaaa aagaaacgcc aagatttagt agaacttttt tttgcacaaa cccatccccc 4681 tccctaaaaa acccagcgct tctaaagcgc ctaatacccc aattttttta actaatctta 4741 gttttttgtt atgaactatg tagtttttta attatttgtt ttagtcatta ggtcacaaga 4801 gaacccaaaa aagaaaaaaa ctgaaaaata caagataaag aaaaacgaaa agcgaaagat 4861 ttatctaata tacacgtatg ttattatgcc tatataatat ttcgtatgtc atagtgaaat 4921 atagtaacca attttctaac caatgggact ggtctactta gtcgtgtcaa ataaacaaaa 4981 atcaaatggt agcgaaaaca a