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LOCUS XM_017140263 3542 bp mRNA linear INV 09-DEC-2024 (LOC108056462), transcript variant X3, mRNA. ACCESSION XM_017140263 VERSION XM_017140263.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140263.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3542 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3542 /gene="LOC108056462" /note="protein unc-93 homolog A; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056462" CDS 111..2339 /gene="LOC108056462" /codon_start=1 /product="protein unc-93 homolog A isoform X2" /protein_id="XP_016995752.2" /db_xref="GeneID:108056462" /translation="MGSLPNLHELEEAERKREKRREYELLLEQRARDTSRERERLSAF AQQRKQSSYNAYIMAGLGIGGGGSLSLNAAGGGTAAGNGELPSGNGTNAGKSQTPGLG TGSGLATSSGAPVASGGFALLGLGKKYAPHSHHHQHQHQHHQHHQHRHSLTTRHRVLR TRSSGGAQNVWDEQMMEHLATYSPSPISTRSHRINPVSSYQVQAALAASRRRESINSS IGATSIRRLITLNNRNCRHKVPAHVRQKVWRQFSCLSLAHGLMNCVLLPVMALQGSNA VWHHREQWLPLGPEIGSLLLSALFLVAAGMSLPSIRLMKRYGCGPLLVANYLAVVLFL LSHLYASIYTLLPAYLLLGVTLSGSAGCKAALIVHFGGKLSCSCESQQSQAAVDVLHE EHKMFCNRDQKVRRLARWFRVSQDLGLIAGALLASILLACSDGDFTGDCSGLVYYGNE SWPPQLRDFYNRNEHGDRICGADMCPLRVQSLLAGGWANGSSIPSSIYAGFIESEPRV AGQSLLWLYVLFAVMSLVLSLVILLDKVQATGSSRPERLRDVSITDTLLFAGPLAYFV GTEQAYMLGDFLRAFVTCSLGIGMIAGALIGMGLMQLIVSCTLSMLLRHVKRIVVILA GFFFHSCLLLALSSWKPSSDDSALFYVIAASWGACNGMWETLLLSLVTLNHAGHVTEV QAPLLALRFLGLGLTFAGHGFLCESMKIIALVVLLVISVPPYATLEIRLEAQRKATLV SL" misc_feature <141..>239 /gene="LOC108056462" /note="Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain; Region: bZIP; cl21462" /db_xref="CDD:473870" misc_feature <1791..2300 /gene="LOC108056462" /note="Major Facilitator Superfamily; Region: MFS; cl28910" /db_xref="CDD:475125" polyA_site 3542 /gene="LOC108056462" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ggaatcgcag cggccccaga attagaatca aaatccacag tcaaaaccaa atccaaatcc 61 acataactcc attgcgataa gtttcgatag tttggcaata atcgccggaa atgggcagtc 121 tgccgaatct tcacgagctg gaggaggcgg agcgcaagcg ggagaagcgc cgggagtacg 181 aacttttgct ggagcagcgg gcccgcgaca ccagtcggga gcgggagcga ctctctgctt 241 tcgctcagca gcgcaagcaa tcctcgtata atgcttacat aatggctggc ctggggatcg 301 gcggaggagg atccctgagc ctcaatgcag ccggaggagg aacagccgcc ggaaacggag 361 agctgcccag tggcaatgga acgaatgccg gaaagtcgca gaccccaggg ctgggcacag 421 gatctgggct ggccaccagt tcgggtgctc cggtggccag cggtggcttt gctttgctgg 481 gcctgggcaa gaagtatgcc ccacactcgc accaccatca gcaccagcat cagcaccacc 541 agcaccatca gcaccgccat tcgctgacca ccaggcaccg agtgctccgc acgcgcagct 601 ctggaggagc ccagaacgtc tgggacgagc agatgatgga gcacctggcc acatactcgc 661 cgtcgcccat ttcgacccgt tcgcaccgca tcaacccggt gtcctcgtac caggtgcagg 721 ctgccctggc ggcctcgcgt cgccgggagt cgatcaacag ctccatcggg gccacctcca 781 tccggcgcct gatcacgctg aacaaccgga actgccgcca caaggtgccg gcccatgtgc 841 gccagaaggt gtggcgccag ttcagctgcc tgagcctcgc ccacggcctg atgaactgcg 901 tcctgctgcc ggtgatggcg ctgcagggct ccaatgcggt ctggcaccac cgcgagcagt 961 ggctgccgct gggccccgag atcggatcgc tgctcctgag cgccctcttc ctggtggccg 1021 ccggcatgag cctgcccagc attcggctga tgaagcgcta cggctgcggg ccgctcctgg 1081 tggccaacta tctggcggtg gtgctcttcc tcctgtcgca cctgtacgcc tccatttaca 1141 ccctgctgcc ggcctacctg ctgctggggg tgaccttgag cggatcggca ggctgtaagg 1201 cggccctgat tgtccacttt ggcggcaagc tgagctgctc ctgcgaatcg cagcagtcgc 1261 aggcggccgt ggatgtgctg cacgaggagc acaagatgtt ctgcaatcgg gatcagaagg 1321 tgaggcggtt ggccagatgg ttccgggtct cgcaggacct gggactcatc gcgggagccc 1381 tgctcgcctc cattctgctg gcctgcagcg atggcgactt cacgggcgat tgctccggcc 1441 tggtctacta cggcaacgag agctggccgc cgcagctgag ggacttctac aataggaacg 1501 agcacgggga ccggatctgc ggggcggaca tgtgcccgct gcgggtgcaa tcccttttgg 1561 ccggcggctg ggccaatggc agctccatac ccagctccat ttacgcggga ttcatcgaga 1621 gcgagccgcg ggtggctggg cagtcgcttc tctggcttta tgttctcttc gcggtgatgt 1681 ccttggtcct gtcgctggtg atactgctgg acaaggtcca ggccacgggc tcctcgcgac 1741 cggaacgcct gcgggatgtg agcatcacgg acacgctgct cttcgccggt ccgctggcct 1801 atttcgtggg caccgaacag gcctacatgc tgggcgactt cctgcgggcc ttcgtcacct 1861 gctccctggg cattggaatg attgcgggcg ccctgatcgg aatgggtctc atgcagctca 1921 tcgtttcctg caccctgagc atgctgctgc ggcacgtcaa gcggatcgtc gtgatattgg 1981 ccggcttctt ctttcattcc tgcctgctgt tggccctgtc cagctggaag ccctcgagcg 2041 acgacagcgc cctgttctac gtgatcgccg cctcgtgggg cgcctgcaat gggatgtggg 2101 agacgctgct gctctcgctg gtgaccctca accatgccgg ccatgtgacc gaggtccagg 2161 cccctctgct ggccctccgg ttcctcggac tcgggctgac cttcgccggg cacggcttcc 2221 tctgcgagtc gatgaagatc attgcgctgg tggtgctcct ggtgatcagt gtgccgccct 2281 acgccaccct ggagatccga ttggaggcgc agcgcaaggc cacgctggtc agcttatgac 2341 gcagcatctt cagctagtcc cgacgcctgc gacgggatgt cgtggcccgg acgcacacca 2401 tgtgacatgt tcccgatacg gacaccgata cggacacggt gtcatatccg cggccagatc 2461 tcctccaatc gcaacccgtc agtattgaac aagaacgaga acgagagacc caagtcaagc 2521 gacgcaggct acactacaag ttctgcggcc agaagtcgag ggatgcggac agggatacgg 2581 acagggatac ggtataggta tctctggact tctgtccgcg ggcctagagg ttaagactag 2641 ttcataagat cgatctatac ccatgtgcgg ggggtttcct tctctctaaa tgggtgcatt 2701 ctcaattcgt agcatttgcc agtgccagta atgttgttcc atgtctataa cttatctatc 2761 aaatagagag agcgagagag cgagagaaag agagagggag aagagcttta tgagccacaa 2821 taagcatgta atgtagcatg tagaacgtta tctatgtacg agtatatccg atctgagacg 2881 atacgatatc aattgctgta tctacatatg tattttgacc aaagagggtt tttgtgtgtg 2941 tttcgcaaag caaactaata ttaccttcga agttcgaact ccaatttgca attcccaaac 3001 cgaaccgatc cgatccggtc cagaaataat gttgtgtatg ttatgtatgt gttttatcgg 3061 tgttatgtgc gttatatagg tttcgagacc ctccactttc acctaaccat aggtatacgg 3121 catacccatc ccgattcaga ttccaattca gattcagatt cagattcaga taaagctagc 3181 tgcagctaag gctaactgtt atgataacaa ggtgaaatcc taaggtctaa ggtctaaaaa 3241 caacaatgtt aacattttga gaattttgag agtaaccatt ttgtgaccgt tggcgatttc 3301 atgcatcggg ctaagtatta ctagtatgtt gctagccata tactatatat acacatagac 3361 atactatata tttttttctt agcggcggtt ccatctgaat attgaataaa gcgaatcgca 3421 aacgtgttaa accggggaga cgcaaagtcg aaaaaacgat aagatcgagt tctacgtgta 3481 ttggatgtgt attgtatatt gtaggtgtcc atctccagat ctaataaaga atccaaaaca 3541 ag