Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii uncharacterized protein


LOCUS       XM_017140254            1584 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108056457), transcript variant X1, mRNA.
ACCESSION   XM_017140254
VERSION     XM_017140254.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140254.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1584
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1584
                     /gene="LOC108056457"
                     /note="uncharacterized LOC108056457; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108056457"
     CDS             232..1224
                     /gene="LOC108056457"
                     /codon_start=1
                     /product="uncharacterized protein isoform X1"
                     /protein_id="XP_016995743.2"
                     /db_xref="GeneID:108056457"
                     /translation="MGRPRLVDTTNLVVVLPNRTCRCVVCDKILAGLQRSNIKRHYDR
                     LHPNIVLQRPPRPPQQPKPQKPPSEALNTKMGRPQMVDTDKLCEVLPDGKRCRCKLCE
                     KVLTHRPGNVRRHYNTYHPHIIVQLAPKRWVIAEDKLIPNSQRLNNPDASQLPTNSTT
                     NSTTMETTVMVDNEEAGDGDYEDNASGSQFDIFIGKSELPDEDDNQTEESDTAVELLP
                     ITEAKPGENEPDLVPISVPKPGENEPELVAKPSTSLKASSSSGANVRASTSDCPLVAG
                     DNAIYLQYLGNKFGKYSKRTMNTVQFHINRILYMADMGHFEEKEGNPTGESDSN"
     misc_feature    <283..>372
                     /gene="LOC108056457"
                     /note="Domain of unknown function (DUF4371); Region:
                     DUF4371; cl46273"
                     /db_xref="CDD:480613"
     misc_feature    481..600
                     /gene="LOC108056457"
                     /note="BED zinc finger; Region: ZnF_BED; smart00614"
                     /db_xref="CDD:214746"
ORIGIN      
        1 cgggggttaa taatcaacgt caaacataaa gagaaaaacg tgtttgcaca ctgaagtaaa
       61 ataagacatt taacacacca gtgtgcgaaa ctcttcgcag gagagcaaag agaaagacgc
      121 aggcaatttc cctttgccgt tcgtttcgct cattcttctc gcgacgacga ggagaactca
      181 acaggcacgg cgtgttttat tcacttgtga atttgtggaa tactaaggca catgggcagg
      241 ccgagactcg tggacacgac caatctggtg gtggtgctac caaatcggac ctgtcgttgt
      301 gtcgtctgcg acaagatatt ggccggactg cagaggagca acatcaagcg gcactacgac
      361 cgcctccatc ccaatatcgt cctccagcga ccgccacgcc cccctcagca gccgaagccc
      421 cagaagcccc cgagcgaggc cttaaatacc aaaatgggtc gtccccagat ggtggacacc
      481 gacaaattgt gtgaggtcct ccccgacgga aagagatgcc gttgcaagct ttgcgagaag
      541 gtgttaaccc atcggccggg aaatgtgagg cgccactata atacttacca cccacacatc
      601 atcgtccagc tggcgcccaa acgttgggtc atcgccgagg acaagctcat tcccaatagc
      661 caaagactga acaatccgga tgcctctcag ctgcccacca atagtaccac taatagtacc
      721 accatggaaa ccaccgtcat ggtggataat gaagaggctg gcgacggaga ttacgaggac
      781 aacgcttctg gtagccaatt cgacatcttc atagggaaat cggagctgcc tgatgaggat
      841 gacaatcaaa cggaagaatc tgacaccgca gtggagctat tgcccataac cgaggctaaa
      901 cctggggaaa acgaaccgga tctagtgccc atatcagttc ctaaacctgg ggaaaacgaa
      961 ccggagctag tggctaaacc ttcgacatcc ttgaaggcgt cctccagttc tggtgcgaat
     1021 gttcgtgcat ccacctcgga ttgcccactc gtcgccggtg ataatgctat ctatctgcag
     1081 tatctgggca acaagtttgg caaatactcc aaacgaacca tgaacactgt tcagttccat
     1141 ataaatcgca ttctttatat ggccgatatg ggacactttg aggagaagga aggaaatccc
     1201 actggcgaat ccgattctaa ttgaccatcg ccttggtctg tgttattatt accgttactc
     1261 gtatcctagg gtatattgta ttcatgtctg tctgtccgtt ttagaacgct gagatctcgg
     1321 aaactatgaa agccagaaat ttgggattaa ccatgcagat tcttggggtt cctacgaagc
     1381 gcaagtttgt ttcctcttac gcccacaatt gccataaccg attttttagc tgactaatgg
     1441 gtatcgaggt actcgataat accgttaatt ctctttgaca cgagttgtta aagacctaaa
     1501 accgatttta agggctgtaa gctaaattaa ggaaaggcta gaagattaag taacacctag
     1561 gttttttaaa taaaagatta tatg