Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017140243 2493 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017140243 VERSION XM_017140243.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140243.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2493 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2493 /gene="hec" /note="calcitonin receptor hector; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056448" CDS 64..1581 /gene="hec" /codon_start=1 /product="calcitonin gene-related peptide type 1 receptor" /protein_id="XP_016995732.2" /db_xref="GeneID:108056448" /translation="MTRVSHTEPPTMGAAASDSQSENVEAASQSQMQDNLRIFLKHLY AECVYRYQNVTYDTEDPSVPLGAATDYDFDLPENFSPVPRYLENAALNEGAIDMRNVD AVLAEKEELMATVVSATMATNQRQAEEGGEEERRLFCPLNFDGYLCWPRTPAGTVLSQ YCPDFVEGFNSKFLAHKTCLENGSWFRHPVSNQTWSNYTNCVDYEDLEFRQFINELYV KGYTLSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLACTCVAWILWYRLVVERGEA IAENPLWCIGLHLVVHYFMLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFS PIPVAIVYGLARHFSSPDNKHCWINDSLYLWIFSVPITLSLLASFIFLINVLRVIVRK LHPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSL QGFVVSFLFCFANHDVTFAIRTLLNKWLPSLVTPPPAGSNTGQMATTTPSRELGV" misc_feature 472..669 /gene="hec" /note="Hormone receptor domain; Region: HRM; pfam02793" /db_xref="CDD:397086" misc_feature 691..1491 /gene="hec" /note="insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; Region: 7tmB1_NPR_B4_insect-like; cd15260" /db_xref="CDD:320388" misc_feature 697..774 /gene="hec" /note="TM helix 1 [structural motif]; Region: TM helix 1" /db_xref="CDD:320388" misc_feature order(712..714,724..726,850..852,859..864,871..873, 916..918,937..939,1150..1155,1159..1161,1165..1167, 1330..1332,1339..1341,1384..1386,1396..1398) /gene="hec" /note="putative polypeptide ligand binding pocket [polypeptide binding]; other site" /db_xref="CDD:320388" misc_feature 799..867 /gene="hec" /note="TM helix 2 [structural motif]; Region: TM helix 2" /db_xref="CDD:320388" misc_feature 916..999 /gene="hec" /note="TM helix 3 [structural motif]; Region: TM helix 3" /db_xref="CDD:320388" misc_feature 1033..1095 /gene="hec" /note="TM helix 4 [structural motif]; Region: TM helix 4" /db_xref="CDD:320388" misc_feature 1141..1230 /gene="hec" /note="TM helix 5 [structural motif]; Region: TM helix 5" /db_xref="CDD:320388" misc_feature 1273..1356 /gene="hec" /note="TM helix 6 [structural motif]; Region: TM helix 6" /db_xref="CDD:320388" misc_feature 1375..1452 /gene="hec" /note="TM helix 7 [structural motif]; Region: TM helix 7" /db_xref="CDD:320388" ORIGIN 1 cgtgaacttc gatcccgaaa aaaccgtgca cgattggcac cccgccgatg agcgcattaa 61 cccatgacaa gagttagcca cactgaacca cccacaatgg gagcagccgc ctcggattcg 121 cagtcggaaa atgtggaggc ggcttcgcag agccaaatgc aggataatct gcgcatattt 181 ttaaagcatt tgtatgccga gtgcgtgtac cgataccaga atgtcacata cgatacggag 241 gacccatcag ttccacttgg cgcagcaaca gactacgact tcgatttgcc cgagaacttt 301 agcccggtgc cgcgatatct ggagaacgcc gccctgaacg agggcgccat tgacatgcgg 361 aacgtggacg cggtgctggc ggagaaggag gagctgatgg ccaccgttgt cagtgccacg 421 atggccacaa atcagcgaca ggcggaggag gggggggaag aggagcgacg gctcttctgc 481 cccctgaact ttgacggata tctctgctgg ccaaggactc cggcaggcac cgtgctgagt 541 caatattgtc ccgatttcgt cgaaggattc aacagcaaat ttctggccca caagacctgc 601 ctggaaaacg gctcctggtt ccgtcatccg gtgagcaatc agacctggtc caattacacc 661 aactgcgtgg actacgagga cctggagttt cgccagttca tcaacgagct gtacgtgaag 721 ggctacaccc tctccctcct ggccctgctc atatcgatta taatcttctt gggcttcaaa 781 tccctgcgct gcacccgcat tcggatccat gtgcacctgt tcgcctcgct ggcctgcacc 841 tgtgtggcct ggattttatg gtaccgcctg gtggtggagc gaggtgaagc catagccgaa 901 aatccgctct ggtgcattgg cttgcatctg gtggtgcact atttcatgtt ggtcaactat 961 ttctggatgt tctgcgaggg cctgcacttg cacctggtgc tcgttgtggt ctttgtcaag 1021 gacacgattg tgatgcgctg gttcatcgtc atcagctggt tctcgccgat tcccgttgcc 1081 atcgtctacg gattggccag gcacttcagc agcccggaca ataaacactg ctggataaat 1141 gacagtctct acctgtggat cttctcagtg ccgataaccc tctccctgct ggctagtttc 1201 atttttctga tcaacgttct gcgggtgatc gtgcggaaat tgcatcccca gtccgcccag 1261 cccgctccgc tggcgattcg aaaggcggtg cgggccacca ttatcctggt gccgctgttc 1321 gggctacagc acttcctgct gccctaccgc ccggatgccg gtacccagct ggatcacttc 1381 taccaaatgc tctccgtggt gctggtcagt ctgcagggct tcgtggtctc cttcctgttc 1441 tgcttcgcca accacgatgt caccttcgcc attcgcaccc tgctcaacaa gtggctgccc 1501 agtttggtga ccccgccgcc ggccgggagt aatactggac agatggccac caccacgccc 1561 agccgcgagt tgggcgttta aggcgtacag ctcgagggtc gagcgaaata ttgaccgcat 1621 tgccgagcaa aggttttgat cgcccctcca caaaagcaga gtattggcgt cgaattggca 1681 ttactcttta ggtattttca acttaatgtt cagtcagata tttgaagcac ttaatgagtc 1741 tatttgctgc tctaatataa taacaattta atccagttta aaataagaag tttaagaaac 1801 tttaagaact tttaaaaact tttcctataa attcctcaaa atattttcgt aaatctatct 1861 attgaatttt caaaaatttt gaactaaaat taatttaaac ttagacaagt tgttaaaggc 1921 attttaatac cgtctcaaaa aaattgaatt taaaatataa aaaaaaataa caacattaaa 1981 gcatttaatg tttaaacata tgtgtaagcc aaataaattg ttatacatat ttagtagatc 2041 ctgcgtagag gatgtccctt ctaagtattt aggtttcaga cagctatccc tgatgaaact 2101 aaaaaacagt ttatgccata tccagagaaa ttgcgggaat caagcgtcaa gaatatagtg 2161 taatggttct gcgaacgatt ttaaaaccaa atactatgtg tactatttta tgatatatgt 2221 taaaatacga gtcctgagag gaaatgagca cagacgcaaa atgaaacata cgtacccatg 2281 tacctaatac aacttttttt ttgtctatct cgttaagata tatacgacac tatgatattt 2341 atatatataa atatgtgtaa tgttttgatg ctgtacatgt cagatatata tatatgatat 2401 ttattcctct tagcccagca cacttacgta gtgaataaaa catgttaact gcaaccaatg 2461 tgtttcattg ttcaatttcc agggaataaa aac