PREDICTED: Drosophila takahashii transcription factor Adf-1

LOCUS       XM_017140224            1833 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108056435), mRNA.
ACCESSION   XM_017140224
VERSION     XM_017140224.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140224.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1833
                     /gene="LOC108056435"
                     /note="transcription factor Adf-1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     Proteins"
                     /db_xref="GeneID:108056435"
     CDS             177..1112
                     /gene="LOC108056435"
                     /codon_start=1
                     /product="transcription factor Adf-1"
                     /protein_id="XP_016995713.2"
                     /db_xref="GeneID:108056435"
                     /translation="MCWVTMARKDDPVFNVRFVQFVENQPCLWNYTHPGYSKKEEVQR
                     AWQQVANEIKDTVRNCRERWRTIRSSFLRSLKLAHTQTGRGKRKYYLSKYLQFLIPYT
                     KSRSCQKQVTAATGSPAAGMVLRKPGNATSSASVTIFPDRNQQEDVEEEAAEEEEAKE
                     SDSEMPLDVQVAEVEEEETSSPRRDQEPPTACLPLRLQAIKVEQPTTNHQLERMVNHQ
                     SLVTVPAAALGSHLDWTDLSQWFKGNHLSHLNHTTPPPPATPALGSIPSPPDADYSFL
                     ISLHPYLKEMNGKQNRLFRQKVYGLIDNILDNLDV"
     misc_feature    225..485
                     /gene="LOC108056435"
                     /note="subfamily of SANT domain; Region: MADF; smart00595"
                     /db_xref="CDD:214738"
     misc_feature    984..1088
                     /gene="LOC108056435"
                     /note="BESS motif; Region: BESS; pfam02944"
                     /db_xref="CDD:460758"
     polyA_site      1833
                     /gene="LOC108056435"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gctcagtttt ggttgcgcgg ccgctgcgag cagttgttgc tgctcccctt taagtttttg
       61 gaacccccct ttgttcgttt ttcggcgccc ctcttgtgtc ggccgctgcc cccttttagc
      121 tgcgcccctg tgcatgtgcg aagtaccgtt agcgtgtgcg agagcgggac ggaggcatgt
      181 gctgggtcac aatggcccgc aaggacgatc ccgttttcaa cgtgcggttc gtgcagttcg
      241 tcgaaaatca gccctgtttg tggaactaca cacatccggg atatagcaaa aaggaggagg
      301 tgcagagggc gtggcagcag gtggccaatg agatcaagga cacggtgcgc aactgccgcg
      361 agaggtggcg cacaataagg agcagcttcc tccgatccct gaagctggca cacacacaaa
      421 cgggtcgcgg gaagcgcaaa tactacctgt ccaagtacct gcagttcctc attccctaca
      481 ccaagtcgcg atcctgtcaa aagcaggtga cagctgccac cggaagtcct gcggctggca
      541 tggtccttcg gaaaccgggt aatgccacat cgtccgccag tgtgaccata tttccggatc
      601 gaaatcagca ggaggacgtc gaggaggagg cggcggagga ggaggaggcc aaggagagcg
      661 acagcgaaat gccgctggat gtgcaggttg ccgaggtgga ggaggaggaa acctcgtctc
      721 ctaggagaga tcaggagcca cccaccgcct gtttgcctct gcgcctgcag gccatcaagg
      781 tggagcagcc aaccacgaat caccagctgg agaggatggt gaaccatcag tcccttgtca
      841 cggtgccggc cgctgctctg ggtagccacc tggactggac ggatctgtcg cagtggttca
      901 agggcaacca cctcagtcac ctgaatcaca ccacgccacc gccgccggcc acgccagcct
      961 tgggatccat tccatcgcca ccggatgccg actactcctt tctgatcagc ctgcatccgt
     1021 acctcaagga gatgaacggc aagcagaatc ggctatttcg ccagaaggtc tacggtctca
     1081 tcgacaatat cctggataac ttggatgttt aactgtgcga ggatctacac acgaaaatat
     1141 tgtatttggg tcagtgatag gaattattca aatttgcttt aattggaagc aaggtcacat
     1201 tgcgtcattt gaaaaaagaa aatcaaagga taaatagcct taatcttaat ttaaaaaggc
     1261 ttttagaaaa tgattcaaaa tttgctttga ttacaagcaa ggtcacattg catcttttct
     1321 ataaaacagc atactatcag ctggtaatta aagaaagtct atcggtttct aaaaattttg
     1381 aaaatattta atgtcaaatc accagttgtt ttttgtttca aaaaatattc ttgaggaatt
     1441 gctggccatt tatacatatt tctgccttct aggcaaaaca cttagttctt aattatttat
     1501 gtctaagata agtgaattta aatgggattt gtaatgtttt ggcctgaaac tgaatcaaaa
     1561 ccaagtggaa attttatgaa atttaaaata taaatttatt gttaatgaac cacacgttga
     1621 taagctgaga ttcccacaat tttgtgatat tttctctctg tgtagaagcc acaagccagg
     1681 acgaaatgaa aaaaggaaac acacccagag taacgccaac agtgcccatt tattacatgt
     1741 atagagcgca tttttattgc gctttttgtt gttgttaaac acacacaaac accgatttgt
     1801 tgtttgtaaa ataaaaacga aacaaatatt taa