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PREDICTED: Drosophila takahashii DNA damage-regulated autophagy


LOCUS       XM_017140179            1133 bp    mRNA    linear   INV 09-DEC-2024
            modulator protein 1 (LOC108056399), mRNA.
ACCESSION   XM_017140179
VERSION     XM_017140179.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140179.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1133
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1133
                     /gene="LOC108056399"
                     /note="DNA damage-regulated autophagy modulator protein 1;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:108056399"
     CDS             115..855
                     /gene="LOC108056399"
                     /codon_start=1
                     /product="DNA damage-regulated autophagy modulator protein
                     1"
                     /protein_id="XP_016995668.2"
                     /db_xref="GeneID:108056399"
                     /translation="MSQVYLLPVATFLIFQVTFIGTYIFAVLEGHVVPTVPYISDAAT
                     YSPESCVFGQLINIGSVLLGITIYVRYRQVLQLYEHHPELDASVLRQNRLALWFGLVS
                     CLGISFVGNFQETNVRIVHFIGAFCCFGCGTLYFWMQALISYLILPMSGTRIYAHLRL
                     GMAVVCTILFILLAVTGVMSHILFKGQNPRKWYPSDGGWYFHVVSSISEWIMATVFSF
                     FILSFTQEFRDVSLSHPQIALMSYATTI"
     misc_feature    127..804
                     /gene="LOC108056399"
                     /note="Frag1/DRAM/Sfk1 family; Region: Frag1; pfam10277"
                     /db_xref="CDD:431193"
     polyA_site      1133
                     /gene="LOC108056399"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agcagcactg cgaaagaccc aaacatttgg atcccttgtt cggtttattg cagcgcaatt
       61 aaataagata cgcagaagtt tgtcgtggac ccacagccac ccacagccac cgcgatgtca
      121 caggtttatc tgctgccggt ggccacgttc ctcatcttcc aggtgacctt tatcggcacc
      181 tacatcttcg ccgtgctaga gggtcatgtg gtgcccacgg tgccctacat cagcgatgcg
      241 gccacctact cgccggagag ctgcgtgttc gggcagctaa tcaacatcgg cagcgtgctg
      301 ttgggaatca ccatctacgt gcgctaccgc caggtgctgc agctgtacga gcaccatccc
      361 gagctggacg cctcggtgct gcgccagaac cggctggccc tctggttcgg cctggtctcc
      421 tgcctgggca tcagcttcgt gggcaacttc caggagacga acgtgcgcat cgtgcacttc
      481 atcggcgcct tctgctgctt cggctgcggc accctgtact tctggatgca ggcgctcatc
      541 tcgtacctca tcctgcccat gtcgggcact cggatctacg cccatttgcg gctgggcatg
      601 gccgtcgtct gcacgatcct cttcatcctg ctggcggtca ccggcgtgat gtcgcacatc
      661 ctgttcaagg gccagaatcc gcgcaagtgg tatccctccg acggcggctg gtacttccac
      721 gtggtcagct ccatttccga gtggatcatg gccaccgtct tcagcttctt catcctctcc
      781 ttcacgcagg agttccgcga cgtctccctc tcgcatcccc agatcgccct gatgtcctat
      841 gcgaccacca tttagagtta tgatcttgcg ctggattggc cagcgattcc tctgccagct
      901 tcaacatttt gtgtttattc ccaggtggca ggagcactgc cttctagtgc tccttctctg
      961 tcggattgct gtgatatgcg cgaggattgg gacggcagac agctgcttga ttgaggagct
     1021 atatttattg tttacccgag ttcgttttta caatatatat tagaattact agatcgaact
     1081 aatcggtaga aataatcggt aaatctgtaa aatacaaatc aattaaaatg aaa