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PREDICTED: Drosophila takahashii fasciculation and elongation


LOCUS       XM_017140177            3724 bp    mRNA    linear   INV 09-DEC-2024
            protein Unc-76 (Unc-76), mRNA.
ACCESSION   XM_017140177
VERSION     XM_017140177.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140177.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3724
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..3724
                     /gene="Unc-76"
                     /note="fasciculation and elongation protein Unc-76;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 4 Proteins"
                     /db_xref="GeneID:108056397"
     CDS             464..1903
                     /gene="Unc-76"
                     /codon_start=1
                     /product="fasciculation and elongation protein zeta-2"
                     /protein_id="XP_016995666.2"
                     /db_xref="GeneID:108056397"
                     /translation="MRDLGTKMAELKFEAPLAKFEETDEWGGCDFISNQNALNDTLNL
                     NLKDNSTGGGGGGGKPDAAKLRLLEDAVRDAHVSKNGGGGGGGGATGAGSISPNCNTL
                     QGGGSVLDLGLSDVGLVPGEGAGSGLDGLEKRSLAAGDHVDNFTETFGGSLEDLVNTF
                     DEKITKCFGNYEENVEELAPVQVRSQEEIMNECQMWWTITGNFGNILPIDWSKSYTRQ
                     MHMPTLNLGQSHTKQQQQMRNQQQQLQSQSHQAYPQSNGLGSGLDAQTPGDEFNDLAS
                     EDEAVANDLDMHALILNGLNGDLDDQPIKTVEEVIKEIDDIMDEAESPLEEPDNCDSE
                     VIEKAREVLGAPLYAEKLQYLTTTQLNELYMEMEVLIQELSETLINELALRDELEFEK
                     ELKNSFISLLLAVQNKRRQYHVEKKRGKFQGPEPKYLTTVIPYHLENGTPNNQSLQVL
                     IKILKAINEDSPTVPALLTDYILKVLCPT"
     misc_feature    917..1732
                     /gene="Unc-76"
                     /note="FEZ-like protein; Region: FEZ; pfam07763"
                     /db_xref="CDD:462257"
     polyA_site      3724
                     /gene="Unc-76"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 accacctcta gacgaatttt agttttgaaa agagaaagaa gtgcagtcgc taaatagaaa
       61 agattatttt gtaaaaacaa aacattagca gccgagcgcg acagagtgtt ggtgtgattt
      121 atttttttat tgtttggtgt ttttattgtg cccgaaggca aggaaaaaca gacgaaaagt
      181 cgagctgagt ggagtccaag tggaaacaga accagaatcg gaatcagtcc aattggagtt
      241 tcccggagtc cagttttccg gggcatttcc ccgctcaacc cccaacgacc gagcagccgt
      301 gatttagggg ttgcaaaatt tttgcagcca attcggaaaa gtcgcaggca aggaggagga
      361 aaagtgtgtg tgcgtagaaa ataagggaag cgcgcaattg gaaacaccga gttcggaagg
      421 ggagtcctcc gccgaatcct tgagagaatc cctttcgcgt gccatgcgtg acctcggcac
      481 caaaatggcc gagctaaaat tcgaggctcc gttggcgaag ttcgaggaga cggacgagtg
      541 gggcggctgc gacttcatct cgaaccaaaa cgccctcaac gacacgctca acctgaatct
      601 gaaggacaac tccaccggcg gcggcggagg cggcggcaag ccggacgcgg ccaagctgcg
      661 tctcctggag gacgcggtcc gcgatgctca cgtaagcaag aacggaggag gaggaggagg
      721 agggggagca accggagctg gctccatcag tcccaactgc aacacgctgc agggcggcgg
      781 atcggtcttg gatctcggcc tgtccgacgt cggattggtg cccggcgagg gcgccggctc
      841 cggactggac ggactggaga agcgctcttt ggccgccggc gaccatgtgg acaacttcac
      901 ggagaccttc ggcggcagcc tggaggatct ggtcaacacg ttcgacgaga agataaccaa
      961 gtgcttcggc aactacgagg agaacgtcga ggagctggct ccggtgcagg tgcgcagcca
     1021 ggaggagatc atgaacgaat gccaaatgtg gtggaccatc actggcaact tcggcaacat
     1081 tctgcccatc gactggtcca agtcgtacac ccgtcagatg cacatgccca ccctgaatct
     1141 gggccagagc cacacgaagc agcagcagca gatgcgcaac cagcagcagc agctgcagag
     1201 ccagagccac caggcgtatc cacagagcaa cggattggga tcgggattgg atgcccagac
     1261 tcccggcgac gagttcaacg acttggccag cgaggacgag gcggtggcca atgacctgga
     1321 catgcacgcc ctcatcctca acgggctgaa cggggatctg gacgaccagc cgatcaagac
     1381 ggtggaggag gtgatcaagg agatcgacga catcatggac gaggccgaga gtccgctgga
     1441 ggagccggac aactgcgatt cggaggtgat tgagaaggcg cgcgaggtcc tgggagcgcc
     1501 cctctatgcg gaaaaactgc aatatctgac cacgacacag ctgaacgagc tgtacatgga
     1561 gatggaggtg ctgatccagg agctgagcga gaccctcatc aacgagctgg ccctgcgcga
     1621 tgagctggag ttcgagaagg agctgaagaa ctccttcatc tcgctgctcc tggccgtcca
     1681 gaacaagcgg cggcagtatc atgtggagaa gaagcgcggc aagttccagg gtcccgagcc
     1741 caagtacttg accactgtca ttccgtatca cctggagaac ggcacgccca acaatcagtc
     1801 cctgcaggtc ctgatcaaga ttctcaaggc catcaacgag gacagcccca cagtgccggc
     1861 cctcctcacg gactacatcc tgaaggtgct ctgcccgaca taaggaggct tatcttctct
     1921 atctccctgt ctgtgtttat acaattatgc cgtgcatcta tatacaaatt gcatacacac
     1981 acacaacaca cataatttaa tgattagttt gtactttaaa ttattgttta aagaatcccc
     2041 agggatgtct tacccatcac cagaagtctc ttctttggtc gatccaaaat gatagaacaa
     2101 aatatgcaac aaaatataca tgtaatacat ctatagacac ctatatatat atatatgata
     2161 tataaaatat ttacggagag cgcgctaagg agggaataag ccagtcctcc caataatggc
     2221 aataatactc acttctccga tcctccgccg ccgcctctct ttctcccaga aaccagaaac
     2281 taaagagcat tattcgtatt gttatacagc tgactccaac taagcttaac ttataatatt
     2341 acgtatatga taaatgcaac tggcaaatgc aaaagcttcg aatatttcat ctatgtgtgt
     2401 aatatgcaga tcggaaacca tatattgctt gcattttgtt tgcccagctt aaatgtatct
     2461 gtatctgtat ctgtgtgttc ggccgccaat ccaatcccta gtttgtacaa taagtaactt
     2521 gcgtgtaata tataacttga taactcgatt gtaagaggtg tctggccccc gggaaatccg
     2581 ccgtttccaa atgtgttccg agtgcaattt gtatcatttg agacgggcat cagaatcaga
     2641 ataagaatca gtcgaagtaa ttgttttcgc ttcgctttaa gttttacttt tactatacct
     2701 aatttacaca tttttattgt ttttcgaggc cataaaacgc gttctgtttt gtttaatgta
     2761 aatgaaggaa acacaaattt aattttaatt tgcatagaaa acgctgtgtt atttactttt
     2821 accaaacaag catatataca attaataata ataactataa aaaaataaac aaaaaaatag
     2881 ctaaaaatca gtcaggcgca cagtgctctt ctttttatta tgattaacga taaatcgatc
     2941 ttttttcttt accttctaag ctaccagtca cactaacaag gcaaacttaa aaagattaac
     3001 gataaacgag taaggagaat taaaagtata aagcatacat acttatatga agtttcatca
     3061 agtcaagtcc aaaaagaacc acacttatat catgtttcac atctcacaag acaaaaatcg
     3121 aatggaaaag aagctgaaag ggcgaaaagc gaagaggagt tcgaaatttc caacccattt
     3181 gatcggctct tcaagtagaa gatattcgaa tcacatctaa tgcaaatctt aggtaccttt
     3241 gttagtaaac gatatgcaag acatacctaa aaatccaaga acctatataa aagacaaaag
     3301 acaaaataca cacaagagaa actgcataaa tgtttacgac tccatataca aaatataaat
     3361 gtatatcaaa tatggtcgcg ctttataaat caaaagaaaa cgtatttact aaaacgctaa
     3421 actttaaatg gaatatgact tttttaggtc tctgcaaagt aaaacaaaaa aacaaaaaca
     3481 aaggctatat aaatcatata atatgataca aaattaagaa ggaatcccct aactgtacgt
     3541 gtatttgtaa attatttgaa gagtccatgt taaagtcgaa tgaaaaacaa ataaatgaca
     3601 gcctagaatg gaaattatat ttatttgata aattagtaaa aagagaacac aaaatacata
     3661 gttctatgta caatggacaa accgaaaaac ttttaaattg cttgaataaa aagaagaaaa
     3721 acta