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LOCUS XM_017140174 1840 bp mRNA linear INV 09-DEC-2024 dehydrogenase (D2hgdh), transcript variant X4, mRNA. ACCESSION XM_017140174 VERSION XM_017140174.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140174.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1840 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1840 /gene="D2hgdh" /note="D-2-hydroxyglutaric acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056396" CDS 139..1740 /gene="D2hgdh" /codon_start=1 /product="D-2-hydroxyglutarate dehydrogenase, mitochondrial" /protein_id="XP_016995663.2" /db_xref="GeneID:108056396" /translation="MRFQQLLQMRRLASAGATTLMRRPTTTGPALSMATHPTAGTTWA RATTVRTMAGSGAPIPELTEITDNVQRGNYATLTDKDVAHFEQLLGKNFVLTEDLEGY NICFLKRIRGNSKLVLKPGNTEEVAAILKYCNERRLAVVPQGGNTGLVGGSVPICDEI VLSLARLNKVLSVDEVTGIAVVEAGCILENFDQRAREVGLTVPLDLGAKASCHIGGNV STNAGGVRVVRYGNLHGSVLGVEAVLGTGQVLDLMSNFKKDNTGYHMKHLFIGSEGTL GVVTKLSMLCPHSSRAVNVAFIGLNSFDDVLKTFVSAKRNLGEILSSCELIDERALNT ALQQFKFLNSPISGFPFYMLIETSGSNGDHDEEKINQFIGDGMERGEIQDGTVTGDPG KVQEIWKIREMVPLGLIEKSFCFKYDISLPLRDFYNIVDVMRERCGPLATVVCGYGHL GDSNLHLNVSCEEFNDEIYKRVEPFVYEYTSKLKGSISAEHGIGFLKKDYLHYSKDPV AINYMRDMKKLLDPNGILNPYKVLN" misc_feature 367..1737 /gene="D2hgdh" /note="FAD/FMN-containing lactate dehydrogenase/glycolate oxidase [Energy production and conversion]; Region: GlcD; COG0277" /db_xref="CDD:440046" polyA_site 1840 /gene="D2hgdh" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgataagcat cccagacctc cggggaagtc cggcagtctg gggtttcgtc taatcgaaga 61 cagtgcttga aaaaaattca ccttagccaa ctcgacttat aacagacata taaacttcag 121 tcgcaaccac cctccacgat gagattccag cagctcctgc aaatgcgcag attggccagc 181 gccggggcca ccaccttgat gaggcgaccc accaccactg gcccagccct gtccatggcc 241 acccacccca cagcgggcac cacttgggcc agggccacca cagtgcgcac aatggcgggc 301 agcggggctc cgattccgga actcaccgag atcacggaca acgtgcagcg cggcaactat 361 gccactttga ccgacaagga tgtcgcccac tttgaacagc tcctgggcaa gaactttgtc 421 ctcaccgagg atctggaggg ctacaatatc tgcttcttaa agaggattcg gggcaacagc 481 aagttggtgc tgaaacccgg gaacaccgag gaggtggccg ccatcctgaa gtactgcaac 541 gagcgtcggt tggccgtggt gccgcagggc gggaacacgg gtctggtggg cggatcggtg 601 cccatttgcg acgagattgt gctatcgctg gcgcgcctca ataaagtgct gtctgtggac 661 gaggtgaccg gcatcgccgt cgtggaggcg ggctgcatcc tggagaactt cgaccagcgg 721 gccagggagg tgggcctgac ggtcccactg gatctggggg ccaaggccag ctgccacatc 781 ggcggcaatg tctccaccaa tgcgggcggc gtccgtgtgg tgcgctacgg caatctccat 841 ggctccgttc tcggcgtgga ggctgtgctg ggcaccggtc aggtgctcga cctcatgtcc 901 aacttcaaga aggacaacac cggctatcac atgaagcacc tgttcatcgg atccgagggc 961 acgctgggcg tggtcacgaa gctctcgatg ctctgccccc attcctcgcg ggcggtcaac 1021 gtggccttca tcgggctgaa ctccttcgac gacgtgctga agaccttcgt gagtgccaag 1081 cggaatctgg gcgagatcct cagctcctgc gagctgatcg acgagcgggc cttgaacaca 1141 gccctccagc agttcaagtt cctcaactct cccatctcgg gcttcccctt ctacatgctg 1201 atcgagacct cgggcagcaa tggcgaccac gacgaggaga agatcaacca gttcatcggc 1261 gacggcatgg agcgcggcga aatccaggac ggcaccgtca ccggggatcc ggggaaggtg 1321 caggagatct ggaagatccg cgagatggtg ccgctcggcc tgatcgagaa gagcttctgc 1381 ttcaagtacg acatctcgct gccgctgcgc gacttttaca acattgtgga cgtgatgcgg 1441 gagcgatgcg ggcccttggc caccgtcgtc tgcggctatg gccacctggg cgactccaat 1501 ctgcacctga acgtctcctg cgaggagttc aacgacgaga tctacaagcg cgtcgagccc 1561 ttcgtctacg agtacacgtc gaagctgaag ggcagcatta gtgccgagca cggaatcggg 1621 ttcctcaaga aggactatct gcactattcc aaggatccgg tggccattaa ctatatgcgc 1681 gacatgaaga agctgctcga tcccaacggc atcctcaatc cctacaaggt gctcaactga 1741 aggggtccgt tgtcgtctca ttaataagtc tacagtctac agtcttgtgt ttttttttat 1801 ttccataaat aaattgccta aaattaatta gcaaactgca