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PREDICTED: Drosophila takahashii cyclin-L1 (LOC108056395), mRNA.


LOCUS       XM_017140171            1960 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017140171
VERSION     XM_017140171.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140171.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1960
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1960
                     /gene="LOC108056395"
                     /note="cyclin-L1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 Protein"
                     /db_xref="GeneID:108056395"
     CDS             124..1800
                     /gene="LOC108056395"
                     /codon_start=1
                     /product="cyclin-L1"
                     /protein_id="XP_016995660.2"
                     /db_xref="GeneID:108056395"
                     /translation="MASRGAGAAVVHTTVTATSLTVETITNVLTTVTSLHSNSVNISN
                     NNNVVSSGGGGGAAGQGATDAAGDGAGGVAAPTDASKPIYPRLFNRIVLTLENSLIPE
                     GKIDVTPSSQDGLDHETEKDLRILGCELIQTAGILLRLPQVAMATGQVLFQRFFYSKS
                     FVRHNMETVAMSCVCLASKIEEAPRRIRDVINVFHHIKQVRAQKEISPMVLDPYYTNL
                     KMQVIKAERRVLKELGFCVHVKHPHKLIVMYLQVLQYEKHEKLMQLSWNFMNDSLRTD
                     VFMRYTPEAIACACIYLSARKLNIPLPNSPTWFGVFRVPMADITDICYRVMELYTRSK
                     PVVEKLEAAVDELKKRYIDARNKTKEANTPPAVITVDRNNGSHNAWGGFIQRAIPLPL
                     PSEKSPEKDSRSRSRSRTRTQSRTPRSRSPRSRSPSRERTKKSHRSRSSRSRSRSPPK
                     HKKKSRHYSRSPTRSSSPHSKHRKTKSSRERSEYYSKKDRSGNAGGSNNVSDGDKYRN
                     SGKHSRYSSSSSHRNSGGGGGGEGRGGGERGGSRGGHKHRDGDRSRDRKR"
     misc_feature    460..831
                     /gene="LOC108056395"
                     /note="first cyclin box found in cyclin-L1 (CCNL1) and
                     similar proteins; Region: CYCLIN_CCNL1_rpt1; cd20589"
                     /db_xref="CDD:410292"
     misc_feature    844..1119
                     /gene="LOC108056395"
                     /note="second cyclin box found in cyclin-L (CCNL) family;
                     Region: CYCLIN_CCNL_rpt2; cd20533"
                     /db_xref="CDD:410236"
     polyA_site      1960
                     /gene="LOC108056395"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctcgaaagta tcattcctcc cgttatcgct ttcccgtgcg ctaaaaaaga acgaaattga
       61 caagtaaaac ataaaaataa acgctctacg tggtgaatcg cgcaacgtgg actccggaca
      121 cgaatggcca gccgcggggc cggcgccgct gtggtccaca caacggtgac agccacctcg
      181 ctgacggtgg agacgatcac caatgtgctg accacggtga cttcgctcca ctcgaacagc
      241 gtcaacatct cgaacaacaa caatgtagtt agcagtggag gaggaggagg tgccgctggc
      301 caaggagcga ccgatgcagc cggtgatgga gcagggggcg tggccgcgcc gacggacgcc
      361 agcaagccga tctatccgcg actcttcaac cgcatcgtgc tgacgctgga gaacagcctc
      421 attcccgagg gcaagatcga cgtgacgccg tccagccagg acggactcga ccacgagacg
      481 gagaaggacc tgcgcatact cggctgcgag ctcatccaga cggcgggcat cttgctgcgc
      541 ctgccgcagg tggccatggc caccggccag gtgctcttcc agcgcttctt ctactcgaag
      601 agcttcgtgc gccacaacat ggagacggtg gccatgagct gcgtgtgcct ggcctccaag
      661 atcgaggagg cgccgcgtcg catccgggac gtgatcaatg tgttccacca catcaagcag
      721 gtgcgggccc agaaggagat ctcgcccatg gtgctggacc cgtactacac gaacctcaag
      781 atgcaggtga tcaaggccga gcggcgcgtg ctcaaggaac tgggcttctg cgtgcacgtg
      841 aagcacccgc acaagctgat cgtgatgtac ctgcaggtgc tgcagtacga gaagcacgag
      901 aagctgatgc agctctcctg gaacttcatg aacgactcgc tgcgcacgga cgtcttcatg
      961 cgctacacgc cggaggcgat agcctgcgcc tgcatctacc tgagtgcccg caagctgaac
     1021 ataccgctgc ccaacagtcc cacttggttt ggtgtcttcc gcgtgccgat ggcggacatc
     1081 acggacattt gctaccgcgt gatggagctg tacacgcgct ccaagccggt ggtggagaag
     1141 ctggaggcag ccgtggacga gctgaagaag cgctacatcg atgcgcgcaa caagacgaag
     1201 gaggcgaaca cgccgccggc cgtaattacg gtggaccgca acaatgggtc gcacaatgcg
     1261 tggggcggct tcatccagcg ggcgattcca ctgccgctgc cctcggagaa gtcgcccgag
     1321 aaggactcgc ggtcgcgttc gcgctcccgg acgcgcaccc agtcgcgaac gccgcgctcc
     1381 cgctcgccga ggtcccggtc gccgagtcgc gagcgcacca agaagtccca ccgcagccga
     1441 tcctcccgct cgcgctcccg gtcgccgccg aagcacaaga agaagtcgcg ccactactcg
     1501 cgctcgccca cgcgctccag ttcgccgcac agcaagcaca ggaaaacgaa atcatcgcgg
     1561 gaacgctctg aatactactc caagaaggac cgatcgggaa acgccggcgg cagcaataat
     1621 gtgagtgacg gcgacaagta tcgcaactcc ggcaagcaca gccgctactc ctcctcctcg
     1681 tcgcatcgca acagtggcgg cggcggggga ggagaaggca ggggaggagg cgagagagga
     1741 ggcagccgag gtggccacaa gcaccgggat ggcgatcgct ccagggatcg caagcgctag
     1801 ggattgacta acagacaaaa caaacactcc tttcatttta attgatttgt attttacaga
     1861 tttaccgatt atttctaccg attagttcga tctagtaatt ctaatatata ttgtaaaaac
     1921 gaactcgggt aaacaataaa tatagctcct caatcaagca