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LOCUS XM_017139977 3629 bp mRNA linear INV 09-DEC-2024 X1, mRNA. ACCESSION XM_017139977 VERSION XM_017139977.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139977.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3629 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3629 /gene="tyn" /note="trynity; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056251" CDS 476..2632 /gene="tyn" /codon_start=1 /product="uncharacterized protein tyn" /protein_id="XP_016995466.2" /db_xref="GeneID:108056251" /translation="MQSAESRRNPNRLSAHMGLHLGPLVILVLLVALPGQIHARMAFE KLTDFDFPGNTYYSVKNLSLYECQGWCREEADCQAAAFSFVVNPLSPSQETHCQLQND SSAANPSAAPQRSANMYYMVKLQLRSENVCHRPWSFERVPNKVIRGLDNALIYTSTKE ACLSACLNERRFVCRSVEYDYNNMKCVLSDSDRRSSGQFVQLVDAQGTDYFENLCLKP AQACKNTRSFGNAQKMGVSEEKVAQYVGLHYYTDKELQVTSESACRLACEIESEFLCR SFLYLGQPQGAQYNCRLYHLDHKTLPDGPSTYLNHERPLIDHGEPIGQYFENQCEKAA GSGAGTPPGTLDKIDTLPVSLDTIEDPNLTNLTRNDVNCDKTGTCYDVSVHCKDTRIA VQVRTNKPFNGRIYALGRSETCNIDVINSDAFRLDLTMAGQDCNTQSVTGVYSNTVVL QHHSVVMTKADKIYKVKCTYDMSSKNITFGMMPIRDPEMIHINSSPEAPPPRIRILDT RQREVETVRIGDRLNFRIEIPEDTPYGIFARSCVAMAKDARTSFKIIDDDGCPTDPTI FPGFTADGNALQSTYEAFRFTESYGVIFQCNVKYCLGPCEPAVCEWNMESFESLGRRR RRSIESNETKSEDDMNISQEILVLDFGDEKREFFKADPSTDFAKDKTVTIIEPCPTKT SVLALAVTCALMILLYISTLFCYYMKKWMQPHKIVA" misc_feature 620..775 /gene="tyn" /note="PAN domain; Region: PAN_4; pfam14295" /db_xref="CDD:433846" misc_feature 875..1114 /gene="tyn" /note="Subfamily of PAN/APPLE-like domains; present in N-terminal (N) domains of plasminogen/hepatocyte growth factor proteins, and various proteins found in Bilateria, such as leech anti-platelet proteins. PAN/APPLE domains fulfill diverse biological functions...; Region: PAN_AP_HGF; cd01099" /db_xref="CDD:238532" misc_feature order(926..928,932..934,968..970) /gene="tyn" /note="putative binding site [active]" /db_xref="CDD:238532" misc_feature 1190..1465 /gene="tyn" /note="PAN domain; Region: PAN_1; pfam00024" /db_xref="CDD:459635" misc_feature 1628..2278 /gene="tyn" /note="Zona pellucida (ZP) domain; Region: ZP; smart00241" /db_xref="CDD:214579" polyA_site 3629 /gene="tyn" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cgccaacagc agccattgcg cgtgatgcaa ttgaagtgct aacacctcgt accgctcgag 61 ttttcagcca gcagttgatc gccaatcacc aaaaaaaaaa ccacaccatc atcatcatcg 121 cccagcggat tcatcagcag cgtggacaca ttctgtactt cttctttttt ttttttggtt 181 caatcgcgtg tgtgaaaaat cccactcctt gcggctgcga ttttggcaag tgaacacaac 241 cacaagtgaa cagccaccga aaaccaccgt caaatacaaa aaaaacacaa actgtgaaag 301 tgcaaaaaca cactgaaaaa cactcgctaa aggattaacg tgcaatataa acgaagcaaa 361 agctaaggcc gccaagcaat cgcagaggaa tcagaagacg agaagatttg agcagaagca 421 aagaagaaga cgcgtcttca gccaagaaga aatcgaaagc aaatcagaac gcagaatgca 481 gtcagccgag agtaggagaa atcccaaccg attgtcggcg cacatgggtc tccacctggg 541 tcccctggtg atcttggtcc ttctggtggc tctgcccggc caaatccatg cccggatggc 601 cttcgagaag ctgacggact ttgatttccc cggcaacaca tactacagcg tgaagaacct 661 ctcgctgtac gaatgccagg gatggtgtcg cgaggaagcg gactgccagg cggcggcctt 721 tagcttcgtg gtgaatccac tgtcgccctc gcaggagacc cactgtcagc tgcagaacga 781 ctcgtcggcg gccaatccgt cggcagctcc ccagaggagc gccaacatgt actacatggt 841 caagttgcag ctgcgcagcg agaatgtctg ccatcgtccg tggagcttcg agagggttcc 901 caacaaggtg atccgtggcc tggacaatgc cctgatctac accagcacca aggaggcctg 961 cctgtccgcc tgcctcaacg aacgtcgctt cgtctgccgg tcggtggagt acgactacaa 1021 caacatgaag tgtgtgctca gcgactccga tcgtcgcagc tcgggtcagt ttgtccagct 1081 ggtcgatgcc cagggtacgg attactttga gaatctctgc ctgaagcccg cgcaggcctg 1141 caagaacaca cgctcgtttg gcaatgccca gaaaatgggc gtctccgagg agaaggtggc 1201 ccaatatgtg ggtctgcatt actacaccga caaggagctc caggtgacct ccgagtccgc 1261 gtgccgtttg gcctgcgaaa ttgaatccga gttcctgtgc cgctccttcc tgtacttggg 1321 tcaaccgcag ggcgcccagt acaattgccg gctgtatcac ttggatcaca agaccctgcc 1381 cgatggtccc tccacttatc tgaatcacga acggccgctg atcgatcatg gcgagcccat 1441 tggccagtac tttgagaatc agtgcgagaa ggcagccggc tcgggagctg gaactccacc 1501 aggaacgctg gacaagatcg acaccctgcc cgttagcctg gacaccatcg aggatcccaa 1561 tctgaccaac ttgacgcgca acgatgtcaa ctgcgacaag acgggaactt gctacgatgt 1621 ttctgttcac tgcaaggaca ccaggattgc cgtccaggtg cgcaccaaca agcccttcaa 1681 tggacgcatc tacgccttgg gacgctcgga gacctgcaac attgatgtga tcaactcgga 1741 cgccttccgt ttggatctga ccatggccgg gcaggattgt aacacacaga gtgtgactgg 1801 tgtctactcc aacacggtgg ttctgcagca tcacagcgtg gtgatgacca aggcggacaa 1861 gatctacaag gtcaagtgca catacgacat gagctccaag aacatcacct tcggcatgat 1921 gcccatccgc gaccccgaga tgatccacat caactcgtcg ccggaggctc cgccaccaag 1981 gattcgcatt ctggacacac gacagcgcga ggtggagact gtgcgcatcg gagatcgcct 2041 caacttccgc atcgagatcc ccgaagacac tccctatggc atcttcgccc ggtcttgtgt 2101 ggccatggcc aaggacgccc ggaccagctt caagatcatc gacgacgatg gctgccccac 2161 cgatccgacc atcttccccg gcttcaccgc cgacggcaat gccctgcagt ccacatacga 2221 ggcattccgg ttcaccgaga gctacggcgt catcttccag tgcaatgtca agtactgtct 2281 gggtccctgt gagccggctg tgtgcgaatg gaacatggag tcattcgaat cgctgggcag 2341 gaggcgtcgt cgttccatcg agagcaatga gaccaagagc gaggacgaca tgaacatctc 2401 gcaggagatt ctggtcctgg actttggcga tgagaagcgc gagttcttca aggcagatcc 2461 cagcacggac tttgccaagg acaaaacggt caccatcatc gagccctgcc ccacgaagac 2521 atcggtgctg gccctcgcgg tcacctgtgc gctgatgatc ctgctctaca tctccacctt 2581 gttctgctat tacatgaaga agtggatgca gccccacaag atcgtagcat aagtgaggaa 2641 cgagtggaaa atgaaataga agcaagaaga agcagaagca gtagaacgaa agaatcgaaa 2701 caagaaaaca agaaagaaag aaagaaaaga aaacaaaaag aaagtacaca acaaaattgt 2761 cactcacaca cacacacaca catacgctct ctctctctta cacacacaca tagacactct 2821 aaatctatat ctttgtctcg ctcttgccca ggcgggctca gcccctccca cttacacaga 2881 cacacactac tgacaaccgt ataatttttt gttttttttt ttttaaacga tatacatata 2941 aattaattac ttaatataca atttatttat ttatatttat ttagacttag agcgtgagat 3001 acaaattccc ttgagagcaa agaagagaaa aatgatttcc tagtagacac atacacacac 3061 tcactcacac acacacacac atgagcacat ttcacgtatg cgaattagta ggagaaaaga 3121 agcgaagaaa agagaaagct agatggaaaa aagctgcgag cgagtacttt ctataaagtt 3181 acgaaaggga acaacggaaa tgaaacattg tcctcgccag aaaaagagag agcgagagag 3241 agagagagcg cgaagtggag gacagctgag tgggagagag agaaagaaac aggacgatgt 3301 atcatgatcc cttttgtaac ttctatagag actgcagccg cacacactcg cactcaatca 3361 cacacacaac aacaaacaca ctcacccgtt tccacactca ttcacacaca ctcacacacc 3421 cacacacgca ctcacattta tttaattgta aactgaacgc aataaacagc aaacaaaagc 3481 aatcaaaatg gaactaagga taactgaacg aagaagcaga gacaagaaaa gtaatttcat 3541 cgatagcaaa tcaatggaat tgtgcttaat tgtattgcat ttatttaatt taaatttatt 3601 tatgataata aagaaacgat aatgaccta