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LOCUS XM_017139964 4375 bp mRNA linear INV 09-DEC-2024 (LOC108056246), mRNA. ACCESSION XM_017139964 VERSION XM_017139964.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139964.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4375 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4375 /gene="LOC108056246" /note="uncharacterized LOC108056246; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056246" CDS 76..4119 /gene="LOC108056246" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_016995453.2" /db_xref="GeneID:108056246" /translation="MDTGEELKSWLADQSKPFPARVEFALKVWQSVEFLYPNKYEIIT EWLSVSLGEEHQVHPLPTQQLRDFLKLRAQPGWVTSQIKTQLISRLFEVISQEENANE SSLELLPLTLNSELLQDALRSDPAVLANCFGLLFKSHQRFVEQRKARMPDQDHWDAEF ALPVIKQLAEIARRSQNQKRLLEEYDAQIIRPLVELLLSLKSPCLEELVQLEKQLGAE FTAERIEKHPLHVNLLLLEAAILNNRHTTTQLNKLVKVVLRAGKESAESLPLVTYLLM SLRKHDVPLSMFEFVSNELLQLVREYRKSHLKEILLLLYAALRLNPLLLEQSVYQITV WLLTIRKATPEEEELYSEYLILLLDMFRRLSRAERFIMNLLKALKEWLGKYPLDLTHG EAKKRRLEDSKAPLELEHRFLRLIFARNTLPAAPSSHDAFKQLCQTWPSHSAGVAFTR LVSHLMTKPSLVIWKTLLHSFAELLEEDQPAVLPENLDFARELHAALLCQYLNGTRLA EQVHLYKDQVEQQLQHTSQVLEQFGRRLLSQEHNRRLMTAFLECTERASSFELLLIHY WPDGFPASERPLQLRNFLPAAEWTLIQQRVHNFGKSSCRQRLQRLELQLAESGWLLQD QRGATCSDSLAELVTPQQFFRLTRAQKQLRLQQNKDVDSHLEDAECVELIALQLLKDY AAEIKDSKVKSSLLVKLKVEGQLEEAALISFLRETTSVDKELQLPESQELVDSLQRLP LAQLASNIRSRLWLRIFVLYRDLSRAKQQEEQAKQVLELLIDLMHFGHPLPVCSYFSQ LSDLLQLIPTSSSTGWSFYETLFARCIRRQSSGSEAFLASCTEYLKDQLTASNKLQTE QVRLLLLAIETLSSVTGAQGRRLQRQLQPLLEIYGEMVAHKFRSKKKEASAYKEFVDS TLSGYATYVSSCINRVARQEREKEQEPKEQQDQEPDKKKKKKDKKEKEEREQHQQPID DNFRRICKIYIGHSLNYRNAHAIRLLNVALTHRQRLHLDPDEIEFVLSSYWRQLNADI EAGDISSAASLDCLEPAIKLIIGYKTNEDFLLLLRRLSTQVEQMQRPETPAQHTGLQN VLTLLALFAKCSLSSVKGAMLNEHFELISVSVALRLPEQKDSAYRGHALRLLEAQRNL AGNRTVPLTGETLDCLLGSMLDVNIKQLIGNGGSWQDFVDLYAVLTDNLVVLLKQHSN LMSDRAAQLSALCQDLVQAIVGYRAERKQAQDISETELDGLADLGLKLATVMATVATT QALAVKRVAPFLLIFTIRQMVATERPTTLFEKVKVHIVRVCHELIGICDHRSGHFILR SSSEAGARMYEGLVKEHEKYHKFRGKV" polyA_site 4375 /gene="LOC108056246" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctatcgatat gtgtttggtt ttgttttcat tccgcacgtg gatttaaatt taagtttcac 61 ctgaaagagg agaaaatgga cacaggcgaa gagctcaagt cctggctggc ggatcaaagc 121 aaaccctttc cggcacgtgt tgaattcgcc ttgaaggtct ggcaatccgt ggagtttctc 181 tatcccaaca aatacgagat tatcacggaa tggctgtcgg tttccctggg tgaggagcac 241 caggtgcacc ccctgcccac ccagcagctc agagatttcc ttaagctgcg ggcgcaacct 301 ggttgggtca cctcgcagat caaaacccag ttgattagca ggctatttga agtgatctcc 361 caggaggaga atgccaatga atcctcgctg gagctactcc ccctgaccct caactccgag 421 ctgctccagg atgccctgcg ttcggatccc gcagtccttg ccaactgctt tggcctcctc 481 ttcaaaagcc accaaagatt tgtggagcaa cgcaaggcta ggatgcctga ccaggatcac 541 tgggatgccg agtttgcact gcctgttatc aagcagctgg ccgagattgc ccgccgctcg 601 cagaaccaga agcgtctgct cgaggagtac gatgcgcaga tcattcggcc gctggtggaa 661 ctgctgctta gcctgaaatc cccctgtttg gaggagctcg tccagctgga gaagcaattg 721 ggtgcggagt ttacagcgga acgtatagag aagcatcccc tccatgttaa cctactcctt 781 ttggaggccg ccatcctaaa caatcgccat acgacaacgc aactcaataa actagtaaaa 841 gtggtccttc gagccggcaa ggaatcggcg gaatcgctgc ccctggtcac ctacctgctg 901 atgtcgctgc gcaagcatga tgtacccttg tccatgttcg aatttgtctc caatgagctg 961 ctccagttgg tccgcgagta caggaagtcg catctcaagg agatcctgct gcttctctac 1021 gccgccttgc gcctgaatcc tctcctgctc gagcagagtg tctatcagat caccgtgtgg 1081 cttctaacga ttagaaaggc gactcctgag gaggaggagc tgtactccga gtatctcatt 1141 ctcctgctcg acatgttccg tcgccttagt cgcgccgaac gcttcattat gaatcttctc 1201 aaggctttaa aggagtggct gggtaaatat cctttggatt taacccacgg agaagccaag 1261 aagcggcggc ttgaggattc caaggctccc cttgagctag agcatcgctt cctgcgtcta 1321 atcttcgcta gaaacaccct gcccgcggct ccctcctcgc atgatgcctt taaacagctc 1381 tgccaaacct ggccaagtca ttccgcaggc gtggccttca cccggctggt gagccacctc 1441 atgaccaagc cttcgctggt catttggaag accctgttgc attcctttgc cgagctgctg 1501 gaggaagatc aaccagctgt tctgcctgag aatcttgact ttgcccgcga actgcatgct 1561 gcgctgctct gtcagtatct aaacggcact cggctggcgg agcaggtgca tctatataaa 1621 gaccaagtgg agcagcagct gcaacacacc tcgcaggtgc tggagcaatt tggccgccgt 1681 ctgctgagcc aggagcacaa tcgccgcctg atgacggcct tcctcgagtg caccgaacgg 1741 gccagttcct ttgagttgct attgattcac tactggccag atggtttccc tgccagcgaa 1801 cgtccgttgc aactgcgcaa cttcctgccc gccgccgagt ggacgctcat ccagcagcgg 1861 gtgcacaatt tcggcaagag ctcctgccgc cagcgattgc agcgcttgga actgcagctg 1921 gccgagagcg gttggctgct gcaggatcaa cggggagcca cttgctccga ttcgctggct 1981 gaattggtaa cgccgcagca attctttcgg ctgacgcgag ctcaaaaaca actgcgtttg 2041 cagcaaaaca aagatgtaga ctcgcatttg gaggatgcgg agtgcgtgga actgattgct 2101 ttgcagctgc tcaaggatta tgcagcggaa atcaaggatt ccaaggttaa atcatcgctt 2161 ttggttaaac taaaagtgga ggggcagctg gaggaggccg cgttgataag tttcctcagg 2221 gaaacgactt ccgtggacaa ggagctgcag ctgccggagt cacaggagct agtggattca 2281 ctgcagcgcc tgccgctggc tcaattggcc tccaacattc gctcgcgcct ctggctaagg 2341 atctttgtgc tctacaggga tctcagtcgt gcaaagcagc aggaggagca ggctaaacag 2401 gtcctggaac ttctaataga tcttatgcac tttggtcatc ccctgcccgt ttgtagctac 2461 ttctcgcagc taagcgacct gctacagcta atccccacca gctcgtcgac cggttggagc 2521 ttctacgaga ccctcttcgc ccgctgcatt cgtcgccaga gttctggaag cgaggccttc 2581 ctcgccagct gcacagagta cctgaaagat cagttaactg cctctaataa actgcaaacg 2641 gagcaggttc gtctgcttct gctggccatt gaaactctat ccagtgtgac tggagctcaa 2701 gggaggcgat tgcagcgcca actgcagcca ttgctggaga tctacggcga gatggtggcc 2761 cacaagtttc gctcgaagaa gaaggaggct tctgcttaca aggagtttgt agatagcact 2821 ttgtctggtt atgcaaccta cgtgagcagc tgcatcaatc gcgtggccag gcaggagagg 2881 gaaaaggagc aggaaccgaa ggagcagcag gatcaggagc cagataaaaa gaagaaaaag 2941 aaggataaga aggaaaaaga ggagcgggag cagcatcaac aacccattga tgacaacttc 3001 cggcgcatat gtaaaatcta cattggtcat tcgctcaact accgcaatgc ccatgccatc 3061 cgcctgctga atgtggccct cacccatcgc cagcgtttgc atttggatcc ggatgaaatt 3121 gagttcgtgc tgagcagcta ttggcggcaa ttaaatgcgg atattgaagc gggtgatatc 3181 tcatccgctg cctccttgga ttgcctggag cccgccatca agctgatcat tggctacaag 3241 accaacgagg atttcctgct gctcctgcga cgcctctcca cacaggtgga acagatgcag 3301 cgacccgaga cgcccgccca gcatactgga ctccagaatg tgctcacctt gctggcgctc 3361 tttgccaaat gctcgctgag cagcgtcaag ggagcgatgc taaacgagca ctttgagctg 3421 atcagcgtga gtgtggcgct gcgtctgccg gagcaaaagg attccgccta ccgtggtcat 3481 gcgcttcgcc tgctggaggc ccaacgaaat ctggccggga atcgcacggt tccgctgacg 3541 ggcgagactt tggattgcct gctgggcagc atgttggatg tgaacatcaa gcaattgatc 3601 ggtaacggcg gcagttggca ggactttgtg gatctgtacg ctgtgctcac ggataatttg 3661 gtggtgctgc tgaagcagca cagcaatcta atgtccgacc gggcggccca gctgagtgcc 3721 ctgtgccagg atctcgtcca ggccatcgtt ggctatcggg cggagcgaaa gcaggcgcag 3781 gacattagcg aaacggagct tgatggtctg gcggatttgg gtttaaagtt ggctactgtt 3841 atggccacgg tggcgacgac tcaggcgctc gctgtcaagc gagtggcgcc cttcctgctc 3901 atcttcacca tccggcaaat ggtggccacc gaaagaccca caacgctgtt cgaaaaggtc 3961 aaggtccaca tagtgcgcgt gtgccacgag ctgatcggga tctgcgacca ccgttccgga 4021 cactttatcc tgcgctccag cagcgaggcg ggcgccagga tgtacgaggg cctggtgaag 4081 gagcacgaga agtaccacaa gttcaggggc aaggtgtaaa ggaaagagac accttaattt 4141 ttttttttct ttttgtattt ccgataattt cacgcttcaa aaaaaaagaa atatatatat 4201 aaaagtaatt gccctatgtt ctttgagaga cgtgccaaat ttgtactgat tcagaactta 4261 aaatttaacg agcaccacgt tgatgagaga gtagttcccc agtatttgac tgtatggtga 4321 aaatggctgc gcttttcttc ttttctggcc aagagatcct ttggcaaagg cgaga