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LOCUS XM_017139950 3811 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017139950 VERSION XM_017139950.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139950.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3811 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3811 /gene="ewg" /note="DNA-binding protein Ewg; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056236" CDS 370..2748 /gene="ewg" /codon_start=1 /product="DNA-binding protein Ewg" /protein_id="XP_016995439.2" /db_xref="GeneID:108056236" /translation="MLDEDIQSLGSDDDDEDLISSDGSLYEGDLGSMPVNDDVAHQLA AAGPVGVAAAAAIASSKKRKRPHCFETNPSVRKRQQNRLLRKLRGIIYEFTGRVGKQA VVLVATPGKPNTSYKVFGAKPLEDVLRNLKNIVMDELDNALAQQAPPPPQDDPSLFEL PGLVIDGIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPPWWPKELPWANV RMDARSEDDKQKISWTHALRKIVINCYKYHGREDLLPTFADDEDKVNALISQSGDEDE DMELSNPPTIHTVTTMTPPTGNSNQPQQVNVVKINSAGTVITTHTAQSNTPAPTIIQS TNNQHVTTTATLPASTKIEICQAPQQQQQQQQQQHHQQQQHQQQQHQQHHLPSTVHIQ PVAGGQPQTIQLTTASGTATATAVPTTAAAVSAAQAHAHAHNHAHSHSQAHGHAHSQS SGNQTVTAQQIANAQVCIEPITLSDVDYTTQTVLSQNADGTVSLIQVDPNNPIITLPD GTTAQVQGVATLHQGEGGATIQTVQSLTDVNGHENMTVDLTETQDGQIYITTEDGQGY PVSVSNVISVPVSMYQSVMANMQQIQTNSDGTVCLAPMQVDTSANRGTNATATSSSSA SSSSSPLAGNVQCYSLISAGSAAAVLGRRTAAGGVVNQQGGRYYLATAAASAATTSSN NNNSSLANNNNNSIKMPLPMPIVLATPSLPQVATRSTRRGGISGGGGAAAVAAGGGTN SMVMVQKRRKASAALKSRTHLKASEGNSSIRCVDSASLTQLQLPSIKLEHLE" misc_feature 544..1143 /gene="ewg" /note="NLS-binding and DNA-binding and dimerization domains of Nrf1; Region: Nrf1_DNA-bind; pfam10491" /db_xref="CDD:463112" polyA_site 3811 /gene="ewg" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tccagtgaag aaggtgcgag gaaagaaggg aagaggatca ggagcaggga tcaggagcag 61 gagggaggaa tcccccgaag caccggcaaa ctggccacca caagctatcg gttggtcgtg 121 gcgccggcgg gcagccagcg gagttcggct ggcaatgtgg tggtcacgac cacgaccacc 181 tcctcgggca gcaactcctc gaatggcggg ggtaacaacg cgggcagcag ttcgggcagc 241 ggcggtctca atgtgaccac catcacaacg actggcggag gaggaggcgg cggcggagga 301 ggaggcggtg gccagctgca gagtggcggc aacagttccc agagcaatgg gaccacctac 361 aagatcgaaa tgctggacga ggatatccaa agtttaggct ccgatgacga cgacgaggat 421 ctgatcagca gcgatggcag tttgtacgag ggagatcttg gttccatgcc cgtgaacgat 481 gacgtggccc accagttggc cgccgccgga ccagtgggcg tggcagcagc ggctgccatt 541 gcgagttcca agaagcgcaa gcgaccccat tgcttcgaaa cgaatccctc ggtgcggaag 601 aggcaacaga atcgattgct acgcaagctg cgcgggatta tctacgagtt cacgggtcgc 661 gtgggcaaac aggctgtggt tttggtggcc acacctggta aacccaacac tagctacaag 721 gttttcggag ccaagccgct ggaggatgtg ctgcgcaacc tgaagaacat tgtgatggac 781 gaactggaca atgcgttggc ccagcaggcg ccaccgccgc cacaggatga tccgtcgctc 841 ttcgaactgc ccggcctggt gatcgatggc atacccacgc ccgtggagaa gatgacccag 901 gcgcagctgc gagccttcat cccgctgatg ctgaagtatt cgacggggcg ggggaaaccc 961 ggttggggca gggagtccac gcgaccgccc tggtggccca aggagctgcc gtgggccaat 1021 gtgaggatgg atgcccgctc cgaggacgac aagcagaaga tcagctggac gcatgcgctg 1081 cgcaagatcg tgatcaactg ctacaagtac cacggcaggg aggacctgct gcccaccttt 1141 gccgacgacg aggacaaggt caacgctctg atctcgcaat cgggcgacga ggacgaggac 1201 atggagctat cgaatcctcc caccatccac acggtcacca ccatgacgcc gccgacgggc 1261 aatagcaatc aaccgcagca ggtgaacgtg gtgaagatca acagtgccgg aacggtgatc 1321 accacccaca cggcccagag caacacgcct gctccgacga tcatccagag caccaataac 1381 cagcatgtga ccacgacggc cacgctgcct gcctccacga agatcgagat ttgccaggcg 1441 ccgcagcagc agcaacagca gcagcagcag caacatcacc agcagcagca acaccagcaa 1501 cagcagcacc agcaacacca cctgcccagc acggtgcaca tccagccggt ggccggtggg 1561 cagccgcaga cgattcagtt gaccacggcc agtggaacgg cgacggccac cgcggtgccg 1621 acgacagcgg ccgccgtgag tgcggcacag gcccatgccc acgcccacaa ccacgcccac 1681 tcgcattcgc aggcccatgg acacgcgcac tcgcagtcga gtggcaacca gacggtcacc 1741 gctcagcaga tcgccaatgc ccaagtctgc atcgagccca ttacgctgag cgacgttgat 1801 tacaccacgc aaacggtgct ctcccagaat gccgatggca ccgtgtcgct gatccaggtg 1861 gatcccaaca atcccatcat cacactgccg gatggaacca ctgcccaggt gcaaggtgtt 1921 gccacgctcc accagggcga aggaggcgcc accatccaga cggttcagag tctcaccgat 1981 gtcaatgggc acgagaacat gaccgtggat ctcaccgaga cgcaggatgg ccaaatatac 2041 ataaccaccg aggatggtca aggctatccc gtttcggtga gcaatgtgat ctcggtgccc 2101 gtctccatgt accaatcggt gatggccaac atgcagcaga tccagacgaa cagcgatgga 2161 accgtctgcc tggcgcccat gcaggtagat acgagtgcca atcgcggtac taatgccacc 2221 gccaccagct cctcctccgc ctcctcctcc tcgtctcctt tggcgggcaa tgttcagtgc 2281 tactcgctga tctcagcggg ttcagcagcg gcggttctag gtcgtcgcac tgccgctggt 2341 ggagtggtga accagcaggg ggggcgttac tacctggcca ccgccgccgc ctcagccgcc 2401 accactagca gcaacaacaa caatagcagc ctggcgaata ataacaataa tagcataaag 2461 atgccactgc ccatgcccat tgtactggcc acgcccagtt tgccgcaggt ggcaaccagg 2521 tccaccagaa ggggcgggat tagcggagga ggaggagctg cagctgtcgc cgccggagga 2581 ggaactaact ccatggtgat ggttcagaag cgaagaaaag cgagtgccgc cctaaaaagt 2641 agaactcatc taaaggccag tgaagggaac tcctccattc gatgcgtgga tagcgccagt 2701 ttgacccagc tccagctgcc ttccatcaag ctggagcacc tggaatagta gtagtgaccc 2761 acccctcatc caaagaaaca ccagcccatc tcgaatctag tcaaatgcgg ctttgcacaa 2821 aacacaaaca agaaatctaa aatctaaatg agaaactagg aagataagag ggaaactaat 2881 gcacttgcca tttaagcctg taaacttaga cacatgcaca ttgtgaatgc caaaaaaatt 2941 agtagagata ctaaactgta cgaattgaat ttagtgccgg aaaaagagag gaagaccaaa 3001 taatttgttg ataattgaaa ccgaaaacca aatcaaaaac agagctaaat caaaaactaa 3061 aattgttcct agttagaaaa gcagttaaca gagctacaaa acatttaaca tacaatttgt 3121 ttagttttta gccatttgtt tagtagttaa gtcgacgagg agtacagaag ataatcgtgc 3181 aaataatctt gcttagagcg caacacacac caaatattaa ccaatttaag ttgtaccatt 3241 tgggtaagtt ttagtcagta agtagtaaag cgaacaggga tcagcctagg cgtaaaatat 3301 gtatgtactt gtcagcttgt gaattttagc caccctttta gacccaccat ccaaaaacca 3361 tcccccagaa aaaaagaaaa cgtagtcaat tcgcattgaa aatgcgctaa aatgcgggga 3421 aacgagtttg ccattggagt tagttagctt tatgcgggag atatatgtgc tatatatata 3481 gatatataga tgtagagggg attcgatata ttctcctcga agtgcgtgca aaataatttt 3541 atgttgatct ataactatta ctattaccat tattgctatt gtgtttttaa ttcaattcat 3601 tattgctatt acctattact attgtgttta aatgtttgat tttatatata ccgcacttat 3661 ttgaattgtt ttagaccaaa ttttatgttt aatcgaatga gagaagccaa caaattttat 3721 tgaataaatc ttttgttgtt gtgattttat tataatttta cctttgaatt tttgctagta 3781 aataaagccc agcaaatgaa tttgaatatt a