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LOCUS XM_017139948 7509 bp mRNA linear INV 09-DEC-2024 G9a (G9a), mRNA. ACCESSION XM_017139948 VERSION XM_017139948.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139948.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7509 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7509 /gene="G9a" /note="histone-lysine N-methyltransferase G9a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056234" CDS 931..5769 /gene="G9a" /codon_start=1 /product="histone-lysine N-methyltransferase EHMT2" /protein_id="XP_016995437.2" /db_xref="GeneID:108056234" /translation="MTDFVELMNSMSSTFNSDCATSTAEGGTLLNLDLAEDKTLKWRN LANNQFACKDKKHREREEKEEEREREENKEEQESRNQDVEIEDIKGLLADVVDAAAVK LEEEEAAAAEAKQQNAEKLEGSSGEKEEQQQQQQKEEVEEEEQVEQRKEEEEKALEKE EAEEEEQGKEVAAEEEEAKAAEKQEASAELTTTTGEAAGEAREPATTNEAASPLVVEA AAAADKNEQLSPGGTRRSRKTPRSATPTPTPTTDEPPAQLKITELEALELPKEADNRL EEISTLEEISAAAGGGQEIKPSSMTTSSPEENSAPAPKRGRGRAKKIRPDVTEMPVET SEILPPGEDSVVEKKPGRKRKLPEEQMDHLSDLVVVKTEQEELALDAPSGGDGKRMRR SVRLGNRLPADGGAWEEVKTEPAELSFIEVTPVPMPPAAVLDEKTPPKKRGRKAKIPP GSSTSSAALPALTNGSQKKTTPTAGGSSELQLPKRSKRRIKPTPKILENDELRCEFET KHIERMTHWESAAAAAASAADGEFETPTGGGSNSSTSRQKSDKSDGSNFDGVPGHPAG TSAIKKRLFSKSQRDIENYGAAMLAKSKVRPCPDVEQFLSDIKASRIMANRSPEERKL NKKQQRKLAKQKEKHLKHLGLQRNHSEEASDNDSSNTDNEFVPTTRVQVGKPSVTLRV RNTVAKELPTTSAAAAAQKANLKPAKLTRRVAVKGGAGGVAGSTTLDPEQLHSLNTSI LADAAPIRELDARPSTSKVAKFICLCQKSSQYYARNAPDSSYCCAIDHIDEQKIGCCN ELSSEVHNLLRPSQRVSYMILCDEHKKRLHSHNCCAGCGIFCTQGKFVLCKQQHFFHP DCAQRFILNTPYEEGRNGDQEEPAAKFSSPMLVLKCPHCGLDTPERTSTVTMKCQSLP VFLPTQKYKIKPAKLTTSSHLAQFGAAGKVSSSSPGAKVKGKGGSSAAAATSSASKSN GSQRSKAAGSHALNTINFAQLIPDSVMNVVLRGHVVSASGRVTTEFTSRDMYYAVQND DLERVAEILAADFNVLTPIREYLNGTCLHLVAHSGSLQMAYLLLCKGASSQDFVNIVD SELRTALMCAVMNEKCDMLNLFLQCGADVAIKGPDGKTCLHIAAKLGNVEATQLIVES YRASRNITSFLSFIDAQDEGGWTAMVWAAELGHTDIVSFLLNQEADPNICDNDNNTVL HWSTLHNDGLDTITVLLQAGADCNVQNVEGDTPLHIACRHSVTRMCIALIANGADLMI KNKAEQLPFDCIPNEESECGRTVGFNMQMRSFRPLGLRTFVVCADASNGREARPIQAV RNELAMSESEDEADSLMWPDFRYVTQCIIQQNSVQIDRRVSQMRICSCPDSCSSDRCQ CNGASSQNWYTAESRLTADFNYDDPAVIFECNDVCGCNQLSCKNRVVQNGTRTPLQIV ECEEQAKGWGVRALANVPKGTFVASYTGEILTAMEADRRTDDSYYFDLDNGHCIDANY YGNVTRFFNHSCEPNVLPVRVFYEHQDYRFPKIAFFACRDIDAGEEICYDYGEKFWRV EHRSSVGCRCLAASCKYASQSSSTNASPTDAATAAEPETVTQPPANANENANASEEME QA" misc_feature <1765..2364 /gene="G9a" /note="large tegument protein UL36; Provisional; Region: PHA03247" /db_xref="CDD:223021" misc_feature 3208..3654 /gene="G9a" /note="Zinc-binding domain of euchromatic histone lysine methyltransferases EHMT1 and EHTM2; Region: EHMT_ZBD; cd20905" /db_xref="CDD:411018" misc_feature 4021..4740 /gene="G9a" /note="Ankyrin repeat [Signal transduction mechanisms]; Region: ANKYR; COG0666" /db_xref="CDD:440430" misc_feature 4096..4194 /gene="G9a" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 4204..4293 /gene="G9a" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 4297..4422 /gene="G9a" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 4429..4521 /gene="G9a" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature order(4432..4434,4444..4449,4456..4464,4468..4473, 4483..4485,4492..4494,4519..4521,4525..4527,4531..4533, 4543..4548,4555..4563,4570..4575,4585..4587,4594..4596, 4621..4623,4627..4629,4633..4635,4645..4650,4657..4665, 4669..4674,4684..4686,4693..4695,4720..4722) /gene="G9a" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:293786" misc_feature 4525..4623 /gene="G9a" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 4627..4722 /gene="G9a" /note="ANK repeat [structural motif]; Region: ANK repeat" /db_xref="CDD:293786" misc_feature 4945..5640 /gene="G9a" /note="SET domain (including pre-SET and post-SET domains) found in euchromatic histone-lysine N-methyltransferase EHMT1, EHMT2 and similar proteins; Region: SET_EHMT; cd10543" /db_xref="CDD:380941" misc_feature order(5257..5265,5314..5316,5335..5337,5344..5349, 5353..5355,5362..5379,5395..5397,5428..5442,5464..5466, 5470..5472,5509..5511,5557..5559,5563..5565,5572..5577, 5602..5616) /gene="G9a" /note="active site" /db_xref="CDD:380941" misc_feature order(5257..5265,5365..5370,5428..5442,5563..5565, 5575..5577,5602..5616) /gene="G9a" /note="SAM binding site; other site" /db_xref="CDD:380941" misc_feature order(5335..5337,5344..5349,5353..5355,5362..5364, 5371..5373,5377..5379,5395..5397,5572..5577,5584..5589) /gene="G9a" /note="polypeptide substrate binding site [polypeptide binding]; other site" /db_xref="CDD:380941" misc_feature order(5446..5448,5608..5610,5614..5616,5629..5631) /gene="G9a" /note="Zn binding site [ion binding]; other site" /db_xref="CDD:380941" polyA_site 7509 /gene="G9a" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgcctcaaga gttttcagcg cggtgtgcgt gcgtgtgcgt gcgtccccaa cacaacggcg 61 tgtgtgtgtg tgcgtgtgct tttcttaata tttttttttg ttaataataa ttcttgtgag 121 actgcagtgc agcagaagcc aaagaaagtg aaagcagtgc agccagagaa ttgcgccccc 181 ggaattttgg cttaacaatt ccagaatcac aaaaacaaaa aataaaacag tgactgcagc 241 agcagcagca acaaaaacgc agcagcagcg acgtcggcag agcggcagca gcagcagcag 301 caacaacaac agcaatctag gtggtggaga ggagagggag agcaagagag agggccatac 361 tcgattcgaa cagcatgtga gctaatcagc gaagcagcga tttctacaaa catttctgct 421 tcttaaggcc accaaaaaaa agcgaagaag aagtgctaca aattattaat aatttagtta 481 atgatttatt caagtgacgt cgcgtgtttt tctcctgttt tttgcccaat aatcaaaaca 541 acaacggcag tgggagaggg agagagagac aagaaacggg agcgaagaaa aacagttaac 601 tttgtggcca ccaaaaagcg cagtcgagaa gaagaagaga aagagattgg ggagcgattt 661 taagtaaaat acgaattgaa tcattcgtat ttattggttt ttggttttaa acaagaaaat 721 ccgtgtgaaa atagtgaaca aatttcgaag cgaacaaaac gctgctgctg cgctgccaca 781 gaggcaccac agcaatctta tcgccccaaa aaaaaaaaaa agaaatatat ataatattcc 841 agagacctca gaaaaactga tggtttctag ccatggacta ttgattcccc cgaataatat 901 ccagtgaaaa gcgaagaaaa gtcgggaaaa atgacggact ttgtggagct gatgaacagc 961 atgtcgagta ctttcaacag cgactgtgcc acttcgacgg ccgagggggg gacgctgctc 1021 aacttggatt tggccgagga caagacgctc aagtggcgca atttggccaa caatcagttt 1081 gcctgcaagg acaagaagca cagggagagg gaggaaaagg aggaggagag ggagagggag 1141 gagaacaagg aggagcagga atccagaaat caggatgtgg aaatcgagga tatcaaggga 1201 cttttggcgg atgttgtgga tgcggcggct gtcaagttgg aggaagaaga agcagctgca 1261 gcggaggcca aacagcagaa tgcagaaaag ctagaaggaa gcagcgggga aaaggaagag 1321 caacagcaac aacaacaaaa ggaagaagta gaagaagagg agcaagtgga gcagcgaaag 1381 gaagaagagg aaaaagcctt ggaaaaggaa gaggcagagg aggaggagca gggaaaggag 1441 gttgcagcag aagaagaaga agcaaaagca gcagaaaaac aggaagcaag tgcagaatta 1501 acaacaacaa caggagaagc agcaggagaa gcaagagaac cagcaacaac aaatgaggca 1561 gcatctccac ttgttgttga ggcagcggca gcagctgata aaaatgaaca gctttcgcca 1621 ggaggaacgc gacgctctag gaaaacgccg cgcagtgcca cgcccactcc cacgcccacc 1681 accgatgagc cacccgccca gttgaagatt accgagttgg aggcattgga actcccaaaa 1741 gaggctgata atcgcctgga ggagatcagc acgctggagg agatctcagc agcagctggt 1801 ggtggtcagg agataaagcc gtcgtccatg accacttctt ccccggagga gaactctgca 1861 cctgctccca aacgaggaag aggtcgagcc aagaaaataa gaccagatgt gaccgaaatg 1921 ccagtggaaa ccagtgaaat tctgcctcca ggcgaggatt cggtggtgga gaagaagccg 1981 ggacgcaaga ggaagctgcc ggaggaacaa atggaccatc tcagtgacct ggtggtggtg 2041 aaaaccgagc aggaggagct ggcattggat gctccctcgg gtggcgatgg aaaaaggatg 2101 cgtcgcagtg tccgactggg caatcgctta cccgccgatg gaggcgcctg ggaggaggtg 2161 aagactgagc cggcagagct ctccttcatt gaggtcactc cggtgccaat gccaccagct 2221 gcggtgctcg atgagaagac ccctcctaag aaacgaggtc gcaaggccaa gattccgcca 2281 ggcagctcca cctcctccgc cgcacttcct gccctgacca atggcagcca gaagaagacc 2341 actcccacag ctggaggatc atccgagttg caactgccca agcgctccaa gaggcgcatc 2401 aagcccacgc ccaagatcct agagaacgat gagctgcgct gcgagttcga gacgaagcac 2461 atcgagcgaa tgacccactg ggagagtgca gcagcagcag cagcttcagc agcggatggg 2521 gaatttgaga caccaacagg aggcggttcc aattcatcaa cttcgcggca aaagagcgac 2581 aaatccgatg gcagcaactt cgatggcgtt ccaggtcatc cagccggcac gagtgccatc 2641 aagaagcggc tcttctccaa gtcgcagcgc gacatcgaga actacggagc cgccatgctg 2701 gccaagagca aggtgcgtcc ctgtccggat gtcgagcagt tcctcagcga catcaaggcg 2761 tcgcgcatca tggcgaatcg ctcgccggag gagcgcaagc tgaacaagaa gcagcaaagg 2821 aagctggcca agcagaagga gaagcacctg aagcatctgg gactgcagcg taatcacagc 2881 gaggaggcct ccgacaacga tagttccaat acggacaatg agtttgtgcc cacgaccagg 2941 gtgcaggtgg gcaagcccag tgttacgctg agggtgagga acacggtggc caaggagctg 3001 cccacaacat ccgcggcagc agctgctcag aaagccaacc taaagccagc caaactcacg 3061 agaagagtgg cagtaaaagg aggagctgga ggagtagctg gatcaaccac gctcgatcca 3121 gaacaactgc actcgctgaa cacctcgatc ctggccgatg ctgcgcccat cagagaactg 3181 gatgcccggc ccagcacctc gaaagtggcc aagttcattt gcctgtgcca gaagagttcg 3241 cagtactatg ccaggaatgc gccggattcg tcctactgct gtgccatcga tcacattgac 3301 gagcagaaga tcggctgctg caacgagctc tcctcggagg tgcacaacct cctgcgtccc 3361 agccaaaggg tcagctatat gatcctgtgc gacgagcaca agaagcgcct gcactcgcac 3421 aactgctgtg caggatgcgg gatcttctgc acgcagggta aatttgtgct gtgcaagcaa 3481 cagcatttct ttcatcccga ctgcgcccag cgcttcatcc taaacactcc ctacgaggag 3541 ggacgtaatg gcgaccaaga ggaaccggca gccaagttca gcagtcccat gctggtgctc 3601 aagtgcccgc actgcggact ggacacgccc gagcgcacct ccacggtgac catgaagtgc 3661 cagtcgctgc ccgtctttct gcccacccag aagtacaaga tcaaacccgc caagttgact 3721 acctcctcac atctggcgca attcggagcg gctggaaagg tcagcagcag cagtccagga 3781 gccaaggtta aaggcaaggg aggatcttcc gctgctgcag caaccagttc agcttcgaag 3841 tcgaacggca gccaacggag caaagcagca ggaagccatg ccctcaacac aatcaacttt 3901 gcccagctga ttcccgactc cgtgatgaac gtggtgctgc gcggccatgt ggtttcggcc 3961 agtggacgcg tgaccacgga gtttacctcc cgggatatgt actatgcggt gcaaaacgat 4021 gacttggaaa gggtggcgga gattctggct gccgacttca atgtgctgac ccccattcgg 4081 gagtacttga acggcacctg cctgcatttg gtggcccatt cgggcagcct ccagatggcc 4141 tacctgctgc tctgcaaggg cgccagttcg caggatttcg tcaacatagt ggacagcgaa 4201 ctgcggacgg cattgatgtg tgcggtgatg aacgagaagt gcgacatgct caatctcttt 4261 ctgcagtgcg gagccgatgt ggccatcaag ggccccgatg gcaagacctg tctgcatatt 4321 gccgccaagc tgggcaacgt ggaggccacc cagttgattg tggagagcta ccgagcttcg 4381 cggaacatca ccagcttcct gagcttcatc gatgcccagg atgagggcgg ttggacggcc 4441 atggtgtggg cagcggagct gggacacacg gatatcgtta gcttcctgct caaccaggag 4501 gccgatccga acatctgcga caacgacaac aacacggtgc tccactggtc gacgctgcac 4561 aacgatggtc tggacacgat tacggtgctg ctgcaggcgg gtgctgattg taatgtgcag 4621 aatgtggagg gggatacgcc actccacatt gcctgccgtc actcggtcac ccgcatgtgc 4681 atcgctctga ttgccaacgg cgccgatctg atgatcaaga acaaggcgga gcagctgccc 4741 ttcgactgca tccccaacga ggagtccgaa tgcggccgca ccgtgggctt caacatgcag 4801 atgcgcagct tccgaccgct gggcctgcgc acctttgtgg tctgtgccga tgcctcgaat 4861 ggccgcgagg cacgacccat tcaggcggtg cgcaacgaac tggcgatgtc cgagagcgag 4921 gacgaggccg attcgctgat gtggccggac ttccgctacg tgacgcagtg catcatccag 4981 cagaactcgg tgcagatcga ccggcgcgtc tcgcagatgc gcatctgctc ctgcccggac 5041 agctgcagca gcgatcggtg ccagtgcaac ggagcctcct cgcagaactg gtacaccgcc 5101 gagagccgcc tcaccgccga cttcaactac gacgatccgg cggtgatctt cgagtgcaac 5161 gacgtctgcg gctgcaatca gctctcctgc aagaaccgcg tggttcagaa cggaacaagg 5221 acaccgctgc agatcgtcga gtgcgaggaa caggccaaag gatggggcgt tcgggcactg 5281 gccaatgtgc ccaaaggcac cttcgtggcc agctacacgg gcgagatcct gaccgccatg 5341 gaggccgatc ggcgcaccga cgacagctac tactttgacc tggacaacgg gcactgcatc 5401 gatgccaact actatgggaa tgtgacccgc ttcttcaacc actcgtgcga gccgaatgtg 5461 ctgccagttc gcgtcttcta cgagcaccag gactaccgct tccccaagat cgccttcttc 5521 gcctgccgcg acatcgatgc cggggaggag atttgctacg actacggcga gaagttctgg 5581 cgcgtggagc accgctccag tgtgggctgc cgctgcctag ccgcctcctg caagtacgcc 5641 tcccaatcct caagcacaaa tgcctcgccc acggatgcag cgactgcagc ggaaccggaa 5701 acggtaacgc agccacctgc aaatgcaaat gaaaatgcaa atgcctcgga ggagatggag 5761 caggcgtagg ccgccaccac catgacctca actcgaaatg attccagaat ccccaccaaa 5821 agccacaagc caccagcaac caagccacat acatcggaca gccgacatct gacatcacag 5881 caccagcagg aaagatcgcc atatatgtag tatatatagt atatatcata tgcatgatga 5941 atcgaaatgg gagcccgtca aaaaggaagg gccttcttct tcgactgcca aatgtttcat 6001 ggtttacaaa ttttttgtct atttttatgc atacagttag tgtttgttta ttattaattt 6061 tatttggttt ttattcattt gtttaccttt gccccctaat attaattaat tttttattac 6121 cgctacctgt aatcacccat tatttttatg ttatttacga gaagctaatt gacaagaagg 6181 gcaacaagtt gccgcgtgca aatcccatcc cttccccact gtttgggtgt gtgtgtgcga 6241 aatgtaaatg tcctaaactt aatttagaat tagacttgta gacggaaaag tgcatctagt 6301 cataagaacg agggagacgg aagtttaaaa atagagagag agcgggaaaa ctcgtttcgt 6361 gagtttcata gttcatagaa aagcttttaa ttaggttttc ctctccgttt aacaatacaa 6421 atttcattag gaggatttaa tgcaacaata acccaaagta catgataaat aacggagcag 6481 aaaacatgtt tttgatatca ggcattgatt taaactagca tttagctgat atacatataa 6541 tatgttgcag ggtaaagtac tgatagtcgt taacaggaaa taagttgaag ttgttttttg 6601 tatttagcca ggcacacaca cacatgcaca cacgcaccca actggacacc accaactcct 6661 ccaatctaat cccatcctaa ccaaaatcga aagcattata ttgcacaatt cgtgttagag 6721 tttttcagtt tgccaagcaa cgttagccaa gccacaagtg cctcaaagag aataatacca 6781 ataccccaac atcccaacac cctaacacgc tctagaaatc taaaagaccc cccgatttgg 6841 cttcagacca agatggttat atacaggaac tacctataca gctatcaatc gaccaagatc 6901 acaaactgcg ttgcattttg ggacacgacc ctcgatagtc gacggactgc ggtttactta 6961 atgtgtgagt tctccgattc cgatcatata tagtatagta tagcatatcc cccgcgtcta 7021 acgaaccccc ccttgattcc cgtgtgtgct atatagactt ggatatatcg ggctataaac 7081 tttgatgtgt gttttgcgtc tataggtgta taaggtgtaa atgtttgtaa cgacaatata 7141 ggagtatgta tgtagtttaa gatgtagatt atccccccag acctctcact ccccccttcc 7201 ccgccagccg caaggtcaag ggtcaaagga caaaggacac acaggacagg tctccggcct 7261 gcgacttttc cactggcctt tctatacgta tttgtgtacc tacgataagc aacaagattt 7321 acaatgaata tatatatgta cggtttcgat gtccccgggt ttatcgcatc cgaatccgga 7381 tcggatcaga agatcacacc tagaaattat agcataactc acacggaaca cgtatgtttt 7441 taattttaat ttgaattgtt atcgcggaca gcaataaagc tgtcgtctta tttgttttgt 7501 ttgccttga