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LOCUS XM_017139944 1246 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017139944 VERSION XM_017139944.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139944.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1246 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1246 /gene="Or1a" /note="Odorant receptor 1a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056231" CDS 1..1194 /gene="Or1a" /codon_start=1 /product="odorant receptor 1a isoform X1" /protein_id="XP_016995433.2" /db_xref="GeneID:108056231" /translation="MSKLIEVFLGNLWTQRFTFARMGLDLLPNSGNRKGKVLRSPILY GIMFLATGFELCTVCAFMVQHRNQIVLCSEALMHGLQMISSLLKMAIFLAKSHDLVAL IQLIQTPFTDADEDEDLSEWRSQNRRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYH STGEFAPVSSFRVILPYDVTQPHIYALDCCLMVFVLSFFCCSTTGVDTLYGWCALGLS SQYRRLGQQLMWIQEHSDPSRSDFGFGKLFAEHARLLNLVQHFNASFMEIAFVEVLVI CVLYCSVICQYIMPHTDQNFAFLGFFSMVVTTQLCIYLFGAEQVRLEAEAFGRQLYEV IPWQKLSPQHRRLLLFPLQRAQRETILGAYFFELGRPLLVWIFRTAGSFTTLLNALYA KYETP" misc_feature 244..1143 /gene="Or1a" /note="7tm Odorant receptor; Region: 7tm_6; pfam02949" /db_xref="CDD:251636" ORIGIN 1 atgtcaaagc taatcgaggt gtttctgggg aatctctgga cgcagcgatt cacctttgcc 61 cgaatgggct tggatctgct gcccaatagc ggcaatagaa agggcaaagt tctgcgatct 121 cccattcttt atggcattat gtttctggcc accggctttg aactctgcac cgtgtgcgct 181 tttatggtcc aacatcgcaa ccaaatcgtg ctctgttcgg aggccttgat gcatggcttg 241 cagatgatct cctcgcttct aaagatggcc atattcttgg ccaagtccca cgacctggtg 301 gccctcattc aattgattca gacgcctttt acggacgccg acgaggacga ggatctttcg 361 gaatggcgat cccagaatcg caggggccaa cttatggctg ccatttactt catgatgtgt 421 gccggcacaa gtgtctcctt tctgttgatg ccagtggctt tgaccatgct gaaataccat 481 tcgacggggg aatttgcacc agtcagctcg tttcgggtga tccttcccta tgacgtaact 541 caaccgcata tctacgccct ggactgctgc ctgatggtgt tcgttctgag cttcttttgc 601 tgctccacca cgggagtgga caccttatat ggctggtgtg ccctgggcct gagctcccag 661 taccgtcgcc ttggtcagca gttgatgtgg attcaggagc actccgatcc atctcgttcg 721 gatttcggtt tcggcaaact cttcgccgaa catgctcgtc tcttgaactt ggtccaacat 781 ttcaatgcca gctttatgga aattgccttc gttgaggttc tggtgatctg tgtgctctat 841 tgttcagtga tttgccagta cattatgcca cataccgacc agaatttcgc ctttcttggg 901 ttcttttcca tggtggtcac cacccaattg tgcatctatc tctttggcgc cgaacaagtt 961 cgtttggagg ctgaggcatt tggcagacag ctttacgagg tgattccttg gcaaaaactt 1021 tctccgcaac accgaagact tttacttttt cccctgcaac gagctcaacg cgaaaccatc 1081 ctgggtgctt attttttcga actgggaaga cctttactcg tttggatatt tcgcacagcg 1141 ggctctttta caactttact caacgcactt tatgcaaaat acgaaacgcc ttagagacac 1201 taaaacttac gcttttatat agaaacccca cctttatggc gcaata