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PREDICTED: Drosophila takahashii L-dopachrome tautomerase yellow


LOCUS       XM_017139932            1989 bp    mRNA    linear   INV 09-DEC-2024
            (y), mRNA.
ACCESSION   XM_017139932
VERSION     XM_017139932.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139932.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1989
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1989
                     /gene="y"
                     /note="L-dopachrome tautomerase yellow; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 23 Proteins"
                     /db_xref="GeneID:108056218"
     CDS             168..1811
                     /gene="y"
                     /codon_start=1
                     /product="protein yellow"
                     /protein_id="XP_016995421.2"
                     /db_xref="GeneID:108056218"
                     /translation="MMLQDKGWIPVTLVTLVITLITPSWAAYKLQERYSWNQLDFAFP
                     NARLKEQALASGDYIPQNGLPVGVEHFGNRLFVTVPRWRDGIPATLTYINMDRSLTGS
                     PELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNPCPYAVN
                     VFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKSCDDAYAYFADELGYGLIAYSWE
                     LNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRSDGYRTLYFSPLA
                     SHRQFAVSTRILRDETRTEDSYHDFVALDERGPNAHTTSRVMSDDGIELFNLIDQNAV
                     GCWHSSMPYSPQFHGIVDRDDVGLVFPADVKIDENKNVWVLSDRMPVFLLSDLDYADT
                     NFRIYTAPLATLIENTVCDLRNNAYGPPNTVSIPKQAAALPIGPPLYTKQYRPVLPQK
                     PQTSWVSSPPPPSRTYLPAGNPGNVVSSISVTSNTVGPAGVEVPKAYIFNQHNGINYE
                     TSGPHLFPTHQPAPSIGQDGLKTYVNARQSGWWHHQHQG"
     misc_feature    537..1397
                     /gene="y"
                     /note="Major royal jelly protein; Region: MRJP; pfam03022"
                     /db_xref="CDD:308585"
ORIGIN      
        1 gccacggtcc acagaagagg ataaaaaata aaacccagag actaactaac accaaagaac
       61 gccgccccaa gaactttaaa ttatatttgt ttaatatatt tttttttttt tgccaaacca
      121 ttttggcccc agtgttacgg tggtgtgttc gttgttagta gtgtgccatg atgttgcagg
      181 ataaaggatg gatcccggtg accctggtca cactggtgat caccctgatc acgccctcgt
      241 gggctgccta caagctccag gaacgctata gctggaacca actggacttc gccttcccga
      301 atgcccgatt gaaggagcag gccctcgcca gtggcgatta tattccacaa aatggtcttc
      361 ccgttggcgt cgagcacttt ggcaatcgac tattcgtcac agttcctcgc tggcgagacg
      421 gaatcccagc cactctgact tatataaaca tggatcgcag cctgacgggc tcaccggaac
      481 tgattcccta tcccgattgg cgatcgaata ccgctggaga ttgtgcgaac agcataacga
      541 ccgcgtatcg catcaaagtc gacgagtgcg gtcgtctgtg ggttttggac actggaaccg
      601 tgggcattgg caataccacc accaatccct gcccctacgc cgtgaatgtt ttcgatctga
      661 ccacggatac gcgaatccgg agatacgaac ttcctggtgt ggacaccaat ccgaatacct
      721 tcatcgccaa tattgccgtg gatattggca agagttgcga cgatgcctat gcctattttg
      781 ccgatgaact gggctatggc ctgattgcct actcgtggga attgaataaa tcctggcggt
      841 tctcggccca ttcgtacttc ttccccgatc ctctgagggg cgatttcaat gtggccggca
      901 ttaatttcca atggggcgag gagggcatct ttggcatgtc cctgtcgccg attcgttcgg
      961 acggctatcg taccctgtac ttcagtccct tggccagtca tcgacagttt gccgtttcca
     1021 cgaggattct gcgagatgag accaggacag aggatagcta ccatgatttt gtggccctcg
     1081 atgaacgtgg tccgaatgcc cataccactt cgcgtgtgat gagcgacgat ggcatcgagt
     1141 tgtttaattt aatcgatcaa aatgccgtcg gttgctggca ctcttcgatg ccctactcac
     1201 cgcaattcca tggcattgtg gatcgcgatg atgtgggcct ggtctttccg gccgatgtga
     1261 agattgatga gaataaaaat gtttgggttc tatcggatcg catgccagtc tttttgctct
     1321 ccgatctgga ttatgctgat accaatttcc gtatttacac cgcaccgctg gccacactga
     1381 ttgagaatac tgtgtgtgat ttgaggaata atgcctacgg gccaccgaat acggtttcga
     1441 tacccaagca agcagctgct ctgcccatcg gtccaccgtt gtacaccaaa caatatcgtc
     1501 ctgttttgcc acagaaaccg cagaccagtt gggtctcatc gccaccgccc ccgagtcgca
     1561 cttatttgcc agccggaaat ccgggaaatg tggtatccag catcagtgta acctcgaata
     1621 cagtgggtcc tgccggtgtt gaggtgccaa aggcttacat tttcaatcag cacaatggaa
     1681 ttaattacga gacaagcggt ccccatctgt ttcccaccca tcaaccggct ccatcgatcg
     1741 gtcaggatgg cctgaaaacc tatgtgaacg cccgccaatc tggatggtgg caccaccagc
     1801 atcagggtta agcattaacc catatcttcc cactcactct cgcttcttgt ataggatatt
     1861 taatgacaaa acactctcat gagcaaaatg aaaccataaa cacagggcaa cagcggttat
     1921 ttgataaaac aacaaaaaat cacacgatgt attggcaagt ggcaaatcga gtatttcccc
     1981 tagctttgt