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LOCUS XM_017139853 2050 bp mRNA linear INV 09-DEC-2024 protein 6 homolog (LOC108056156), mRNA. ACCESSION XM_017139853 VERSION XM_017139853.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139853.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2050 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2050 /gene="LOC108056156" /note="U3 small nucleolar RNA-associated protein 6 homolog; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056156" CDS 84..1898 /gene="LOC108056156" /codon_start=1 /product="U3 small nucleolar RNA-associated protein 6 homolog" /protein_id="XP_016995342.2" /db_xref="GeneID:108056156" /translation="MGEFIAEMQERLLPEYEQMKNYSVFTADQVREIVGRRERLFLKI NKSHQSITDYLEFILYEKHMHLTIEDKEKKMHVKLTGLKTSIATRIMRLYREALGKFT HDRRLWSNWIKFSKKSNPVEVAGIYEKMLLYHGDVPDYWVDAAMWLYEYNRLNIDRVK DILLRGLQRHSDSPTLNKCFFDIMLKEAALANDERTLDENTISEQDIKLERVEAVYRN SMANITQLDYFVKLLESCEDYQELTGKLQRLIIDDMQEKFPREPGLWDLLAQRELRGF HLGDLEDEELDTSDEEPASKKSRSVNARSLKRRIQLCVTVYKSAVEQLQTPEIWNMYL DAMLALNSDGKTERILKQQCLADALQAGHRSQMMGVKHYAILRKMLCTAPSGREAAVT ILTEALKTDSSVEMHELLLATHIQSDSEPLIYEMFQKIQKSMGSEALPLWRSVLLYYH TRQDTLGASRLDEIYGLACKSAWPEFGDLRSDYLRYLWQERSVDDARKEYAKLAVQPP MSLALHRQMVQLESSAAVHNPASLKYWRMCYDFMACYFGKTEPRVWVEYLAFERDHGE TKNIALLTQRAINTLEPQYVAAFEAERALAYVGASIVG" misc_feature 84..>866 /gene="LOC108056156" /note="Uncharacterized conserved protein, contains HAT (Half-A-TPR) repeat [General function prediction only]; Region: COG5191" /db_xref="CDD:227518" polyA_site 2050 /gene="LOC108056156" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgaccgttg cgttgcacgt gcgcctgttt ctcaagaaat aaacaatatt tttattatat 61 tagtaagcat taaataggca aacatgggcg agttcatagc tgagatgcag gagcgcctgc 121 tgccggagta cgagcagatg aagaactaca gcgtattcac ggcggatcaa gtcagagaaa 181 tcgtcgggcg gcgggaacgc ctgttcctga agatcaacaa gagccaccag agcatcaccg 241 actacctgga gttcattctg tacgagaagc acatgcacct gaccatcgag gacaaggaga 301 agaagatgca cgtgaagctg accggtctga agacctccat agccacgcgg atcatgcgtc 361 tgtacaggga ggctctcggc aagttcaccc acgaccggcg gctgtggagc aactggatca 421 agttcagcaa gaagtccaat cccgtcgagg tggccggcat ctacgagaag atgctgctgt 481 accacggcga tgttccggac tattgggtgg atgccgccat gtggctgtac gagtacaacc 541 gcctcaatat cgaccgcgtc aaggacattc tgctgcgcgg tctgcagcgc cactcggatt 601 cgccgaccct caacaagtgc ttctttgaca ttatgctcaa ggaggccgcc ctggccaatg 661 acgaacgcac gctggacgag aacacgatct ccgagcagga catcaagctg gaacgcgtgg 721 aggcggtcta ccgcaacagc atggccaata tcacgcagct ggactacttt gtgaagctcc 781 tcgagagctg tgaggattat caggagctga cgggcaagct gcagcgtctg attatcgacg 841 acatgcagga gaaattcccc cgcgaaccgg gcctttggga tctgctcgcc cagcgcgagt 901 tgcgcggctt tcatctgggc gacttggagg acgaggaact ggataccagc gacgaggagc 961 ccgccagcaa gaaatcccgc tcggtgaatg cccgctcgct caagcgacgc attcagctct 1021 gcgtgacggt ctacaaatcg gcggtggagc agctgcaaac gccggagatc tggaatatgt 1081 acctcgatgc catgctggcc ctaaacagcg acggcaagac agagcgcatc ctcaagcaac 1141 agtgcctggc ggatgccctg caagcgggcc atcgctctca aatgatgggt gtgaagcact 1201 acgctatatt gaggaaaatg ctctgcacag caccgagtgg aagggaggcg gctgtcacca 1261 ttctaacgga ggccctgaag accgattcct ctgtggagat gcacgaactg ctgctggcca 1321 cgcacatcca gagcgatagt gagccgctga tctatgagat gttccagaag atccagaaga 1381 gcatgggcag cgaggcgttg ccgctgtggc gcagtgtcct tttgtattat cacacgcggc 1441 aggacacttt gggcgccagc aggctggacg agatctacgg tttggcctgc aagtcggcgt 1501 ggccggagtt tggcgatctg cgttccgatt accttcgcta tctgtggcag gagagatccg 1561 ttgatgatgc gcgcaaggag tacgccaagc tggccgtaca gccgcccatg tcgctggcgc 1621 tgcaccgcca aatggtccag ctggagtcca gtgccgccgt tcacaacccg gccagcctga 1681 agtactggcg catgtgctac gacttcatgg cctgctactt cggcaagaca gagccgcgcg 1741 tttgggtcga gtatctggcc ttcgagcggg atcacggcga aacgaagaac atcgccctgc 1801 tcacccagcg ggccatcaac acgctggagc cccaatacgt ggctgccttt gaggcggagc 1861 gagcactggc ctatgtgggc gcttctatag ttggttgaac aagatttgcc agattatttt 1921 ctctgttttt ttttacataa ttcctaagtc aatcttctgg actgcgtctg tatagtaact 1981 ctagattagg aaatacattt taaacacatc tattgtaatc aatttcgtag tgaatataga 2041 gtttttaaga