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LOCUS XM_017139844 2535 bp mRNA linear INV 09-DEC-2024 4 (APC4), transcript variant X1, mRNA. ACCESSION XM_017139844 VERSION XM_017139844.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139844.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2535 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2535 /gene="APC4" /note="anaphase-promoting complex subunit 4; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056150" CDS 96..2432 /gene="APC4" /codon_start=1 /product="anaphase-promoting complex subunit 4 isoform X1" /protein_id="XP_016995333.2" /db_xref="GeneID:108056150" /translation="MSQTSSMKLLGARNMSCIVERMEWNNKMDLIAYGTEKGEVVIQR LNWQKIVTFPTPGEDVRVRSLSWQMDETLLAVGYSNGKVALLDAESETIISGLIYEDD IKKVYFSKAINAQENLGTYTCNAKDKHRRFLPKLQPLTNIDPCLKTLDQKSFPKGSPC FLVVIMRSGKVHLLLLGALQAGSIDLTQHILHPEQFDVYDVRLNGDFNAIYALLRDGQ ELKMLHFHNQVLQECMAPMLELATHCAHILETKNYINDTQQCLTEAWETVQLEMDNKL TKYANSQPYGLISAHFLELHVFGFATFEVEEFLFETLSEKGFKKIANSVDLSLSNLQS LVFKQLNGSAINMFYFLNTIAGFGRMSHFFESLISPEVANEAMRACGAFVLKVHELQR TIDTLVYDMKLFHAWMIFTILRLSHQEIPDDLVLTEEENIAMADFLCAMEPELEDRSD DDEGEDDVEPLSEVELPQARSKFNLERVGQYLENAYLSQPHTRDPSQLWEEMVAENEC LNDCRLFVPHDKQLSLVQQRDKMFNAIDAVFHKPTESISGSFKLSSAVICNDLPPMEP GEGLEDREIVTCSYYVNEAARSDMLACTISWQEAMILEVSRAGDGLVRCMRIQLEPGL FSSAHEDFYNLRFVDLQFYNESSLSILAQSTSAVSGMRPHSFFIQFSLSAARNQCTQH QMGPLVKLKEATVTHSIHDVVDGAAFKGLDGLCDMLAVSGSRKVATVLSDRKRKMTIF EMEIEEEEDDTEMSQASFLEISKESVLAGVVDSEKPDG" misc_feature 159..428 /gene="APC4" /note="Anaphase-promoting complex subunit 4 WD40 domain; Region: ANAPC4_WD40; pfam12894" /db_xref="CDD:403945" misc_feature 756..1349 /gene="APC4" /note="Anaphase-promoting complex, cyclosome, subunit 4; Region: ANAPC4; pfam12896" /db_xref="CDD:463744" polyA_site 2535 /gene="APC4" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 accctcgata gacgccggca aagtgtaaac caaaaaatta aactttttta attcccattt 61 tttaatgtaa ataaaaggag gaaaagcttg aaaagatgag ccaaacgagc tccatgaagc 121 tgctgggcgc ccgcaacatg tcctgcattg tggagcgcat ggagtggaac aacaagatgg 181 acctgattgc ctacggaacg gaaaagggcg aggtggtcat ccagcggctc aactggcaga 241 agatcgtcac ctttcccacg cccggcgagg atgtgcgggt gcgctccctc agctggcaga 301 tggacgaaac gctcctggcc gtgggctaca gcaatggcaa ggtggctctg ctggacgccg 361 agagcgagac gatcatctcg ggcctcatct acgaggatga catcaagaag gtctacttca 421 gcaaggccat caatgcgcag gagaacttag gcacctacac ctgcaatgcg aaggacaagc 481 accgccggtt cctgcccaaa ctgcaaccgc tgaccaatat cgatccctgt ctgaaaaccc 541 tcgaccagaa gtcctttccc aagggttcgc cctgcttcct cgtggtcatc atgcgcagcg 601 gcaaggtgca tctactgctg ctcggcgccc tgcaggcggg cagcattgat ctcacccagc 661 acatcctgca tccggagcag ttcgatgtgt acgatgtgcg gctaaatggc gactttaatg 721 ccatctatgc cctgctgagg gacggccagg agctgaagat gctgcacttt cacaaccagg 781 tgctgcagga gtgcatggcg cccatgctgg agctggccac gcactgtgcg cacatcctgg 841 aaactaagaa ctacataaac gacacacagc aatgcctgac ggaggcctgg gagaccgtgc 901 agctggagat ggacaacaag ctgaccaagt acgccaattc ccagccctac ggcttgatct 961 cggcccattt tttggagctg cacgtctttg gattcgctac cttcgaggtg gaggagtttc 1021 tgttcgaaac gctgtccgag aagggcttca agaagatcgc caactcggtg gacttgagtc 1081 tgagcaatct gcagagcctg gtgttcaagc agctcaatgg atccgccatc aacatgttct 1141 atttcctcaa cacaatcgcc ggctttggtc gcatgtcgca tttcttcgag tccctcatct 1201 cacccgaggt ggccaatgag gcaatgcgcg cctgcggagc cttcgtgctc aaagtacacg 1261 aactgcagcg aacgatcgac actttggtgt acgacatgaa gctctttcac gcctggatga 1321 tattcactat actccggctg tcgcatcagg agattcccga cgacctggtg ctcaccgagg 1381 aggagaatat agcaatggcc gactttctgt gcgccatgga acccgagctg gaggatcgca 1441 gcgatgatga tgagggggaa gacgatgtgg agccgctttc cgaggtggaa ctaccccagg 1501 cacgcagcaa attcaatctg gagcgagtgg gccagtatct ggagaatgcc tacttgtcgc 1561 agccgcacac ccgggatccc agccagctgt gggaggagat ggtggcggag aatgagtgcc 1621 taaatgactg ccggctgttc gtcccgcacg acaagcaact ctcgctcgtc cagcagcgcg 1681 acaagatgtt caatgccatc gatgcagtgt ttcacaagcc aacggagagc attagcggaa 1741 gttttaagct ttcctccgcc gtgatttgca acgatctgcc gcccatggaa ccgggcgagg 1801 ggctggagga tcgggagata gtgacctgca gctattacgt gaacgaggcc gcgcgcagcg 1861 acatgttggc ctgcacgatt agctggcagg aggccatgat cctggaggtc agtcgggcgg 1921 gcgatggcct ggtgcgctgc atgcgcattc aactggagcc gggattgttc tcctcggccc 1981 atgaggattt ctacaatctg cgcttcgtcg atttgcagtt ctacaacgaa tcctcgctct 2041 cgattctcgc ccagtccacg agcgccgttt ctggcatgcg tccgcacagc ttctttatac 2101 aattctcgct gagtgcggcg cgcaatcagt gcacccagca tcaaatggga ccgctggtca 2161 agctgaagga ggccaccgtg acgcacagca tccacgatgt ggtcgatggg gccgccttta 2221 agggtttgga tggcctctgc gacatgctgg ccgtctcggg cagccggaaa gtggccacag 2281 tgctgtccga tcgcaagcgc aaaatgacca ttttcgaaat ggagatcgag gaggaggagg 2341 acgacacgga gatgtcgcag gcctcgttcc tcgagatcag caaggagtcg gtgctggccg 2401 gggtcgtgga ttcggagaag ccagatgggt agttctttag tctttataaa ttcaaatgga 2461 atgataatta taatttgata atttaagatc gtggaacttg aattattcaa ataattacat 2521 atttcgttgg tggaa