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LOCUS XM_017139841 2074 bp mRNA linear INV 09-DEC-2024 homolog 3 (Lcch3), mRNA. ACCESSION XM_017139841 VERSION XM_017139841.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139841.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2074 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2074 /gene="Lcch3" /note="Ligand-gated chloride channel homolog 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:108056146" CDS 469..1959 /gene="Lcch3" /codon_start=1 /product="gamma-aminobutyric acid receptor subunit beta-like" /protein_id="XP_016995330.2" /db_xref="GeneID:108056146" /translation="MTCTRVGVTCSLLFFLLGAQLQLIRCLRKDVLAGRLENVTQTIS NILQGYDIRLRPNFGGEPLHVGMDLTIASFDAISEVNMDYTITMYLNQYWRDERLAFN IFGQYFDGDDNDDGISDVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLGG DGAVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRGVED AELPQFTIIGYETNDRKERLATGVYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWV SFWINHEATSARVALGITTVLTMTTISTGVRSSLPRISYVKAIDIYLVMCFVFVFAAL LEYAAVNYTYWGKRAKKKIKKVKDCCPGKIGKSERSETCSTTEDIIELQDVRMSPIPS LRRGTYNATLDSIGTETMNLGKFPPSFRITRNYGTGHSQLRRRAQRGINARPRMLHAL KRGASAIKATIPKIKDVNIIDKYSRMIFPISFLAFNLGYWLFYILE" misc_feature 496..1947 /gene="Lcch3" /note="Cation transporter family protein; Region: LIC; TIGR00860" /db_xref="CDD:273305" polyA_site 2074 /gene="Lcch3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttattcatta gatagatata gatactgtgg gtgctcgcac gcagcagttc gaggctacgc 61 gttaaccagg accaaaatac aaaatacaaa tatacaagat acacggacaa gacaggacag 121 gacaggaaag gacaggactg tgcagggaag ggaaaacgaa gtgccagcgg gaaagggaca 181 ggaaacggaa aaggaacagg aacaggaaaa gggaacaaca gtgataaaga taaagattaa 241 gtttgccaat gcataaatct gagtgtgcga ttgcaaattc cccatttatt ggctagtggt 301 ggtgatatat attgatatgg atgaaaagat ccctaaaaca tgccagggta aagaagccag 361 atgcatttga ttttgctgcc gcgatgaaag aggacaagtt ggaaatgaca gtgcaatcga 421 ttccaaaaag ttgagacccg aacaacgaca caagcaaagg ctgtcaatat gacatgtacg 481 cgcgtcggag tcacctgtag tctgctcttc ttcctactgg gcgcccagct acaattgatt 541 cggtgtcttc gaaaagatgt gcttgccggc cgcctcgaga atgttacgca aacgatatcg 601 aacatactcc aaggctacga tattcgactc aggcccaatt ttggcggaga gcccttacat 661 gtcggtatgg atttgaccat agccagcttt gatgccatat cagaagttaa catggattat 721 acgataacaa tgtatttaaa tcagtactgg cgcgatgagc gtttggcatt taatatcttt 781 ggacaatact ttgatggcga tgataatgac gacggcatca gtgatgtgct aacactatcg 841 ggggactttg cggaaaagat atgggtacca gacacgttct tcgctaacga taagaacagc 901 tttctgcacg atgtcactga gagaaataaa ctagtgcgtc tgggcggcga tggagctgtc 961 acatacggca tgcggttcac cacgaccctg gcgtgcatga tggatctgca ctactatcca 1021 ctggactccc agaactgcac tgtggaaata gagagctatg gctatacggt cagcgatgtg 1081 gtcatgtact ggaagccaac gcctgtgcgc ggagtggagg atgccgaact gccccagttc 1141 accatcattg gctacgagac gaacgatcgc aaggagcgac tggccactgg ggtctatcag 1201 cgactgtcac tctcgttcaa attgcaacga aacatcggtt actttgtctt ccaaacgtac 1261 ctgcccagca ttctgatcgt aatgctgtcg tgggtctcgt tttggattaa ccacgaggcg 1321 accagtgccc gcgtggccct gggcatcacc accgtgctca ccatgaccac aattagcacc 1381 ggtgttcgca gctcactgcc acgtatttcg tatgtaaagg caatcgacat ttatctggtc 1441 atgtgcttcg tctttgtatt tgcagccctt cttgaatacg ccgccgttaa ctatacctat 1501 tggggcaaaa gagctaaaaa gaaaataaag aaggtcaaag attgttgtcc aggcaagatc 1561 ggaaagagcg aaagatccga aacgtgttca acgaccgagg acataatcga gctgcaggac 1621 gtccgaatga gtcctattcc ctcgctgcgc aggggaacct acaacgccac cctcgactcc 1681 attggcaccg aaacgatgaa tttgggcaag tttccgccga gttttcgaat aacccgtaac 1741 tacggcaccg gacacagcca gctgaggcgt cgagcacaga ggggaatcaa cgcccgccca 1801 cgcatgttgc atgccctgaa acgcggggcc tctgccatta aggccaccat accgaagatc 1861 aaggatgtca atatcataga caagtactcc cgaatgatat ttccgatcag tttccttgcg 1921 ttcaaccttg gctactggct gttttatatt ctggaatgat gatatataat taattaccct 1981 agcagaacag aacagaacca tgggatccga atacaacttt ttataacctc cataataaag 2041 attgacttcg ccataatatt tgggcgtacc tgaa