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LOCUS XM_017139840 2667 bp mRNA linear INV 09-DEC-2024 transporter SLC46 (LOC108056145), mRNA. ACCESSION XM_017139840 VERSION XM_017139840.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139840.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2667 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2667 /gene="LOC108056145" /note="probable peptidoglycan muropeptide transporter SLC46; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056145" CDS 386..2218 /gene="LOC108056145" /codon_start=1 /product="probable peptidoglycan muropeptide transporter SLC46" /protein_id="XP_016995329.2" /db_xref="GeneID:108056145" /translation="MSPKDGSLGDAKFAKYTVNHESPPPNPNPTPPPTTTTTLSPSVD KSKDKEKDNVTTTPPVKRSWREKIRLVANNVTVEPILAAYIMPSVLSNLATQNLNLEK ACRVNMAYGDEVCDALTRRQTANYTLEEETVQQMVARMAAWKTVIQSLFPCLLILFWG SWSDRHRRRKPCILIPVVGEFLGVVGLMLCVYFEKAPMEAAALTEAIFPSLSGGWFTM LMGVFSYIADITTEEDRTLRIGILNVCFSVGVPIGMAFSGVLLKQIGFYGVFSISAAF YVIAFVYGFFFLEEPVARPEKSAGEQKSLLADFFDKEHVVQTFRVAFKRGENQRRKRV ILLMIVVMVIIGPLHGEMAVTYLFTRFRFNWSEVEFSFFSTYAMFTGLIGVIFCVGVL SHKLNIDDALVGVLSSTSKILSSFVYAFATLPWHMYLGGLVEIFNGTAFIAMRSIATK LVSKDELGKVNSLFGVAEALMPMVFAPMYTTLYAATLRVLPGAFFLLGGGLTLFSVFI FLWMYRFQVRQRRKLASPDAESAARMSVKDPNGNINAIEALALASEAKGQMNGIVANV IHESLEHSEPSTQPPSTNNTNITSESRGIENPGFVQEEVKVKDC" misc_feature 605..1924 /gene="LOC108056145" /note="Solute carrier 46 (SLC46) family of the Major Facilitator Superfamily of transporters; Region: MFS_SLC46; cd17386" /db_xref="CDD:340944" misc_feature order(635..640,647..652,659..661,851..853,1022..1027, 1031..1039,1046..1048,1112..1114,1121..1126,1133..1135, 1406..1408,1415..1420,1427..1435,1442..1444,1526..1528, 1538..1540,1691..1696,1706..1708,1718..1720,1766..1768, 1775..1780,1787..1792,1799..1801) /gene="LOC108056145" /note="putative chemical substrate binding pocket [chemical binding]; other site" /db_xref="CDD:340944" polyA_site 2667 /gene="LOC108056145" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaatatttta gtcgccgagt tcagctcaac gccgatggtt tagacactga gccacagctc 61 gttaagccga aagtggcgtc tgagtaaata aaataaaaat aaataaaaat aaaccaaata 121 aaaacttaac caaataaaat aaaataaaaa taaatacaac atacattgta catggtacat 181 gaatcccatt ttgtttacca tccccaaaag cgatcccaaa agcgatccaa ctgcaattgc 241 agccgtgtaa atgtaaatga ttgcgagcaa acagaaacaa aaacaaaata aacggcaaaa 301 cggcgattag aaaacaaaca aacaacaaaa aaaaaaaaca aacaggagga gcgaataagt 361 gagaaatcag attcttttta gcaggatgtc acccaaggac ggcagcctgg gcgatgccaa 421 attcgccaaa tacacggtga atcacgagtc accgccacct aatcccaatc ccacccctcc 481 tccaacgacc acgacgacac tttcccccag tgtggataaa tcgaaggata aggaaaagga 541 taatgtcaca acgaccccgc ccgtgaagcg atcgtggcgg gagaagatcc gtctggtggc 601 caacaacgtc accgtggaac cgatcctggc cgcctacatt atgcccagcg tgctctccaa 661 tctggccacc cagaacctca acctggagaa ggcctgtcgg gtgaacatgg cctacggaga 721 cgaggtgtgt gatgcactca cccgccgcca aacagccaac tacacacttg aggaggagac 781 cgtgcagcag atggtggcga ggatggccgc ctggaagacg gtgatccagt cgctgttccc 841 ctgcctgctg atcctgttct ggggctcgtg gagcgaccgc caccgccggc ggaagccctg 901 catcctcatc ccggtggtgg gcgagttctt gggggtggtg ggcctcatgc tgtgcgtcta 961 cttcgagaag gcgcccatgg aggccgccgc cctcacggag gccatcttcc cctcgctcag 1021 cggcggctgg ttcaccatgc tgatgggtgt cttcagctac atagcggaca tcaccaccga 1081 ggaggatcgc acgctaagga tcggcatcct caacgtttgc ttctcggtgg gcgtgcccat 1141 cggcatggcc ttcagcggag tcctgctcaa gcaaattggc ttctatggcg tgttctcgat 1201 ctcggccgcc ttctacgtga tcgccttcgt ctacgggttc ttcttcctgg aggagccggt 1261 ggcgcggccg gagaagagtg ccggcgagca gaagagcctg ctggccgact tcttcgacaa 1321 ggagcacgtg gtccagacct tccgggtggc cttcaagcgg ggcgagaacc agcgccgcaa 1381 gcgagtgatc ctgctgatga tcgtggtgat ggtgatcatt ggtccgctgc atggcgagat 1441 ggctgtgact tacctgttca cccgcttccg cttcaactgg tcggaggtgg agttcagctt 1501 cttctccacc tacgccatgt tcaccggcct catcggtgtg atcttctgcg tgggcgtgct 1561 ctcccacaag ctgaacatcg atgatgcttt ggtgggtgtg ctgtccagta cctcgaagat 1621 cctttcgtcc ttcgtctatg cctttgccac gctgccttgg cacatgtact tgggtggcct 1681 ggtggagatc ttcaatggca ctgccttcat agcgatgcga tcgatagcca ccaagctggt 1741 gtccaaggac gaactgggca aggtgaactc gctgtttggg gtggcggagg ccctgatgcc 1801 catggtcttc gcccccatgt acaccaccct gtatgcggcc accctgcgcg tcctgccggg 1861 agccttcttc ctcctgggcg gcggactgac cctgttctct gtgttcatat tcctatggat 1921 gtaccgcttc caggtgcgcc agcggcggaa actggcctcg ccggatgcgg aaagtgccgc 1981 caggatgtcc gtcaaggatc cgaatggcaa tatcaacgcc atcgaagcct tggctctggc 2041 cagtgaggcc aagggccaga tgaacggcat agtggccaat gtgatacacg aatccttgga 2101 gcacagcgaa ccgtccaccc agccaccatc cactaataac accaatatca ccagcgaatc 2161 caggggcatc gagaatccag ggtttgttca ggaggaggtc aaggtcaagg attgttaggc 2221 gagatgagaa cgggatcgat agcgatcata tcccatcctc atgtatgtac atactcacat 2281 tccgctaagg gaatcgggat caggtgagca agtaaccgga aagtgattcg aaaaataaag 2341 aatttccagt gttgataaat cggataaaga agtgagatga taatcgaaat ttcgatatat 2401 cgattgaaat tctccagtga attgaacttg ccgcgaatta ttcttgagcc tgcacatagt 2461 cccaatccca aatcctaaac ctaaataatg tgtacaatta caaaaattat ttttttttta 2521 tttagccata agcttctaaa tgtatttccg ttttcgttgt aattatatcg tatgctactc 2581 cgatttgtta tttttataat ttcttttttt gcctagctgt aaggagcgtt aagaagaatt 2641 taataaatgt atcattgtcc gaagcga