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LOCUS XM_017139816 2371 bp mRNA linear INV 09-DEC-2024 (Stim), transcript variant X2, mRNA. ACCESSION XM_017139816 VERSION XM_017139816.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139816.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2371 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2371 /gene="Stim" /note="stromal interaction molecule; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056128" CDS 298..2013 /gene="Stim" /codon_start=1 /product="stromal interaction molecule homolog isoform X1" /protein_id="XP_016995305.2" /db_xref="GeneID:108056128" /translation="MRKDTIWNYSFIFICCVLKSISSQDHGSHTVSVVSNRYNTQQHQ YKQNPNVAPRHSSHEAGSQSLHHSQSEHATHIAASHAGSGGEHSTHLEQNLHRSSYNL LSEAMSQAVSNEFSSMGSGSADGACADDDFDCYSGSVQDRFGMEAIASLHRQLDDDDN GNIDLSESDDFLREELKYDSGYEKRQKAFHFNDDMHISVKELWEAWLRSEVHNWTIEQ TTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAVNNLQYVGNVLGIKDPIHKQKISLKA MDVVLFGPPRETGTRWKDYILVTLLLSAIIGCWYAYQQNKNAKRHLRRMAQDMEGLQR AEQSLQEMQKELERARMEQENVATEKMDLERRLKEAPTLSSSNSDLEVQQLKKEIEML RNELSRAEFELVDNCWAPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKL RKKRSSLVGAFVSTHGKSIDDVDRSIVEARNALGDVTNELQERLHRWKQIETCLGLNI VNNNGLSYLENVLYGRNGGLQSSMGVSSTKGSRTRITNSTEDLDDESIQGKLNFENFS LLATE" misc_feature 925..1146 /gene="Stim" /note="SAM domain of STIM-1,2-like proteins; Region: SAM_STIM-1,2-like; cd09504" /db_xref="CDD:188903" misc_feature order(937..939,997..999,1030..1032,1078..1080,1117..1119, 1135..1137) /gene="Stim" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:188903" misc_feature 1198..>1683 /gene="Stim" /note="Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; Region: YhaN; COG4717" /db_xref="CDD:443752" misc_feature 1522..1821 /gene="Stim" /note="STIM1 Orai1-activating region; Region: SOAR; pfam16533" /db_xref="CDD:465164" polyA_site 2371 /gene="Stim" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttatttgagg tctaaaaaaa acttatggaa gtttaccact gggcatccac atatgtgtgg 61 ttattaagtg tttagcaatg gcattgtaaa ttgtgccctc ataacgcagc tgaaaacaac 121 cgaagatcgt tgaatttcgc ccttttctac gtttttagaa gatatcatct gttaaaaact 181 atgattttca cgaccaacaa atgtgagctg taaacccgaa aaaatccgaa ccgattactg 241 atttcaaggg aggcgtatgc gatcatttat ttagaagaag tccgcacatt tacaacaatg 301 cgaaaggata ccatttggaa ctattccttc atattcatat gctgtgtgct gaagagcata 361 agctcgcagg atcatggatc gcacacagtt tccgtcgtct cgaatcgcta caacacgcag 421 cagcatcagt acaagcagaa tcccaatgta gcccctcgtc actcttccca cgaggctggg 481 agtcagagtc tgcaccattc tcagtcggag catgcgaccc atatcgcagc atcgcatgcc 541 ggaagcggag gagaacactc cacgcacctt gaacaaaatc tgcataggag ctcatacaat 601 ctcctcagcg aagccatgtc ccaggctgtc agcaatgagt tcagttccat gggaagcggt 661 tcggcagatg gcgcgtgtgc tgatgatgac tttgactgct acagtggaag tgttcaggat 721 cgcttcggca tggaggctat tgcaagcctg catcgccaac ttgatgatga tgacaatgga 781 aacatcgatt tgagcgaatc cgatgacttt ttacgggagg aattgaagta cgactcgggt 841 tatgaaaagc ggcagaaagc atttcacttt aatgacgata tgcatatatc ggtgaaagaa 901 ctttgggagg cttggctgag atcagaggtg cataattgga ccatcgaaca gacgacagat 961 tggttggcac aatctgttca gctgccccaa tatgttgatc tgtttaaatt acataaggtc 1021 actggagctg ctttgccaag gttggctgtg aataatcttc agtatgtggg caatgtactt 1081 ggaataaaag accctataca taagcaaaaa atctcattaa aggctatgga cgttgttctt 1141 tttgggccac cgcgagaaac tggtacccgc tggaaggact acatattggt taccttgttg 1201 cttagcgcta ttattggatg ttggtacgcc taccagcaga acaagaacgc caaacgtcat 1261 ctgcgtcgaa tggcacaaga tatggaggga ttgcagaggg ctgaacaaag tctacaggaa 1321 atgcagaagg aactagaacg agccagaatg gagcaggaaa atgtggccac tgagaaaatg 1381 gatttggaga ggcgtctcaa agaggcccct acactcagtt catcgaattc ggatctggaa 1441 gtacagcagc tgaaaaaaga aatcgagatg ctgcgcaatg aattgtctcg tgccgaattc 1501 gagctggttg ataactgttg ggcaccaccg ccgcagctcc aatcgtggct gcaatacaca 1561 tatgaactag agagtaagaa tcatcagaag aaacgcacat cggctgagaa gcagcttcag 1621 tcggccagag aggcttgtga aaaattgcgg aagaagcgtt cgagtttggt gggcgcattc 1681 gtttccacgc acggcaaaag tattgatgat gtcgatcgat ccattgttga ggcacgaaat 1741 gccctgggag atgtgacaaa tgagttgcag gaacggctgc atcgctggaa gcaaatcgag 1801 acgtgccttg gcttgaacat tgtcaacaac aatggtctgt cctacttgga gaatgttcta 1861 tatggccgaa atggaggctt acaaagttcc atgggcgtca gttcaacaaa ggggtccaga 1921 acacgtatta ccaacagcac cgaagacctg gacgatgagt ctatacaagg taagctgaat 1981 tttgagaact tttcgctgct tgccacggaa taaacggctt gtgcgctcag tctgtgagga 2041 caataaaacc cagctcttca gtaaaagcat actacttgac gaactaaata aaacatagaa 2101 ccgcttattg aaccctgaat gaaatctaaa tctgttttac attaagatgc tgtattaatg 2161 aaggtcatat ataacattat gtgtgtatga tattttaatc tttatatttg taatatatcc 2221 attttatttt tgatgtatac acaatgtcat ctacttaatt atttgtcaaa aacaacgaat 2281 actataaaac caaacagtgt tttgtacgta acaatgaact taatggtggt ccacctagtg 2341 gcagattatt taaataaaga aataaagtat t