Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017139815 2291 bp mRNA linear INV 09-DEC-2024 (Stim), transcript variant X1, mRNA. ACCESSION XM_017139815 VERSION XM_017139815.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139815.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2291 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2291 /gene="Stim" /note="stromal interaction molecule; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056128" CDS 218..1933 /gene="Stim" /codon_start=1 /product="stromal interaction molecule homolog isoform X1" /protein_id="XP_016995304.2" /db_xref="GeneID:108056128" /translation="MRKDTIWNYSFIFICCVLKSISSQDHGSHTVSVVSNRYNTQQHQ YKQNPNVAPRHSSHEAGSQSLHHSQSEHATHIAASHAGSGGEHSTHLEQNLHRSSYNL LSEAMSQAVSNEFSSMGSGSADGACADDDFDCYSGSVQDRFGMEAIASLHRQLDDDDN GNIDLSESDDFLREELKYDSGYEKRQKAFHFNDDMHISVKELWEAWLRSEVHNWTIEQ TTDWLAQSVQLPQYVDLFKLHKVTGAALPRLAVNNLQYVGNVLGIKDPIHKQKISLKA MDVVLFGPPRETGTRWKDYILVTLLLSAIIGCWYAYQQNKNAKRHLRRMAQDMEGLQR AEQSLQEMQKELERARMEQENVATEKMDLERRLKEAPTLSSSNSDLEVQQLKKEIEML RNELSRAEFELVDNCWAPPPQLQSWLQYTYELESKNHQKKRTSAEKQLQSAREACEKL RKKRSSLVGAFVSTHGKSIDDVDRSIVEARNALGDVTNELQERLHRWKQIETCLGLNI VNNNGLSYLENVLYGRNGGLQSSMGVSSTKGSRTRITNSTEDLDDESIQGKLNFENFS LLATE" misc_feature 845..1066 /gene="Stim" /note="SAM domain of STIM-1,2-like proteins; Region: SAM_STIM-1,2-like; cd09504" /db_xref="CDD:188903" misc_feature order(857..859,917..919,950..952,998..1000,1037..1039, 1055..1057) /gene="Stim" /note="oligomer interface [polypeptide binding]; other site" /db_xref="CDD:188903" misc_feature 1118..>1603 /gene="Stim" /note="Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; Region: YhaN; COG4717" /db_xref="CDD:443752" misc_feature 1442..1741 /gene="Stim" /note="STIM1 Orai1-activating region; Region: SOAR; pfam16533" /db_xref="CDD:465164" polyA_site 2291 /gene="Stim" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttaaaagtga cgagtgtatt tttgcccttt cagtggactg gtcactctcg agaggaattt 61 cattatttca gtgatttagt gatatcatct gttaaaaact atgattttca cgaccaacaa 121 atgtgagctg taaacccgaa aaaatccgaa ccgattactg atttcaaggg aggcgtatgc 181 gatcatttat ttagaagaag tccgcacatt tacaacaatg cgaaaggata ccatttggaa 241 ctattccttc atattcatat gctgtgtgct gaagagcata agctcgcagg atcatggatc 301 gcacacagtt tccgtcgtct cgaatcgcta caacacgcag cagcatcagt acaagcagaa 361 tcccaatgta gcccctcgtc actcttccca cgaggctggg agtcagagtc tgcaccattc 421 tcagtcggag catgcgaccc atatcgcagc atcgcatgcc ggaagcggag gagaacactc 481 cacgcacctt gaacaaaatc tgcataggag ctcatacaat ctcctcagcg aagccatgtc 541 ccaggctgtc agcaatgagt tcagttccat gggaagcggt tcggcagatg gcgcgtgtgc 601 tgatgatgac tttgactgct acagtggaag tgttcaggat cgcttcggca tggaggctat 661 tgcaagcctg catcgccaac ttgatgatga tgacaatgga aacatcgatt tgagcgaatc 721 cgatgacttt ttacgggagg aattgaagta cgactcgggt tatgaaaagc ggcagaaagc 781 atttcacttt aatgacgata tgcatatatc ggtgaaagaa ctttgggagg cttggctgag 841 atcagaggtg cataattgga ccatcgaaca gacgacagat tggttggcac aatctgttca 901 gctgccccaa tatgttgatc tgtttaaatt acataaggtc actggagctg ctttgccaag 961 gttggctgtg aataatcttc agtatgtggg caatgtactt ggaataaaag accctataca 1021 taagcaaaaa atctcattaa aggctatgga cgttgttctt tttgggccac cgcgagaaac 1081 tggtacccgc tggaaggact acatattggt taccttgttg cttagcgcta ttattggatg 1141 ttggtacgcc taccagcaga acaagaacgc caaacgtcat ctgcgtcgaa tggcacaaga 1201 tatggaggga ttgcagaggg ctgaacaaag tctacaggaa atgcagaagg aactagaacg 1261 agccagaatg gagcaggaaa atgtggccac tgagaaaatg gatttggaga ggcgtctcaa 1321 agaggcccct acactcagtt catcgaattc ggatctggaa gtacagcagc tgaaaaaaga 1381 aatcgagatg ctgcgcaatg aattgtctcg tgccgaattc gagctggttg ataactgttg 1441 ggcaccaccg ccgcagctcc aatcgtggct gcaatacaca tatgaactag agagtaagaa 1501 tcatcagaag aaacgcacat cggctgagaa gcagcttcag tcggccagag aggcttgtga 1561 aaaattgcgg aagaagcgtt cgagtttggt gggcgcattc gtttccacgc acggcaaaag 1621 tattgatgat gtcgatcgat ccattgttga ggcacgaaat gccctgggag atgtgacaaa 1681 tgagttgcag gaacggctgc atcgctggaa gcaaatcgag acgtgccttg gcttgaacat 1741 tgtcaacaac aatggtctgt cctacttgga gaatgttcta tatggccgaa atggaggctt 1801 acaaagttcc atgggcgtca gttcaacaaa ggggtccaga acacgtatta ccaacagcac 1861 cgaagacctg gacgatgagt ctatacaagg taagctgaat tttgagaact tttcgctgct 1921 tgccacggaa taaacggctt gtgcgctcag tctgtgagga caataaaacc cagctcttca 1981 gtaaaagcat actacttgac gaactaaata aaacatagaa ccgcttattg aaccctgaat 2041 gaaatctaaa tctgttttac attaagatgc tgtattaatg aaggtcatat ataacattat 2101 gtgtgtatga tattttaatc tttatatttg taatatatcc attttatttt tgatgtatac 2161 acaatgtcat ctacttaatt atttgtcaaa aacaacgaat actataaaac caaacagtgt 2221 tttgtacgta acaatgaact taatggtggt ccacctagtg gcagattatt taaataaaga 2281 aataaagtat t