PREDICTED: Drosophila takahashii Bprotein-1 related complex subunit

LOCUS       XM_017139803            1383 bp    mRNA    linear   INV 09-DEC-2024
            5 (BORCS5), mRNA.
ACCESSION   XM_017139803
VERSION     XM_017139803.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139803.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1383
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1383
                     /gene="BORCS5"
                     /note="BLOC-1 related complex subunit 5; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:108056119"
     CDS             184..1251
                     /gene="BORCS5"
                     /codon_start=1
                     /product="BLOC-1-related complex subunit 5"
                     /protein_id="XP_016995292.1"
                     /db_xref="GeneID:108056119"
                     /translation="MGAEHSQQRAEADGHEIFDGRQAQGLGINPSRSVALGDNGSMML
                     AATAAANKRRGIGNHRQQTGGGLTGGGSPVASSIVIASKQIISAEAASPGCSTSELSR
                     PPSPPLSVCSDLPYVSYTDRPIGDSPKIRSKPASHMLHQQQQQSSASRAAARKSHPGG
                     ISKPKRPQSTSSSHNIVIVRPGASDAGEDLDLDLARLRNIPQFLPVLRESITSATYTR
                     DAEILERLHSQHLVNICSRMQTHLNLCASYVASEQNHLVERTKVVSNSITTLFAGFVD
                     MQKTYASYAEQFAKIRSVSHQLSRCNSLLHENIASLEAINNFLDDEDRLEPFVWRTDD
                     NKLRGEAEGATGGNSSRLWRL"
     misc_feature    787..1182
                     /gene="BORCS5"
                     /note="Tumour suppressor protein; Region: LOH1CR12;
                     pfam10158"
                     /db_xref="CDD:287167"
     polyA_site      1383
                     /gene="BORCS5"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ttattctgat tggatttctg gcgaggcttt gtttccttct ctttttggga gtgaatcctc
       61 cccagaaatg acgcagcagg tgggccaagg agagcagtga caccgtcgcc actagtggta
      121 ccagcgaacc aggagcaaca gacggggatt tgcagtcggg actcattcga tttggatcga
      181 taaatgggcg ccgagcactc gcagcagcgg gcggaggccg atggccacga gatcttcgat
      241 ggccgccagg cgcagggact cgggattaac ccgagcagat cggtggccct gggcgacaat
      301 ggctccatga tgctggcggc cacggcggcg gcgaataagc gacgtggaat tggtaaccat
      361 cgccagcaaa caggaggagg attaactgga ggtggatcac ccgtggccag cagcattgtg
      421 atagccagca agcagatcat ctcggcggag gctgcctcgc ccggctgctc cacctccgag
      481 ctgagccgcc cgccctcgcc gccgctgagc gtctgctccg atttgcccta cgtttcctac
      541 acggatcgtc ccatcggcga ttcacccaag atacgcagca agccggcatc gcacatgctg
      601 caccagcagc agcagcagag cagcgctagc agggcagcgg ccaggaaatc acatcccggt
      661 gggatcagca agccaaagcg accgcagtcc acatcctcca gccacaatat cgtcatcgtg
      721 cgacccggtg ccagcgatgc tggcgaggat ttggatctgg acttggcccg actgcggaat
      781 ataccccagt ttctgcccgt cctccgggag tccatcacat cggccactta tacaagggat
      841 gcggagatcc tggagcgtct gcattcgcag catttggtca acatttgctc gcgcatgcag
      901 acgcatttga atctgtgcgc cagctatgtg gccagcgaac agaatcatct ggtggaacgc
      961 accaaggtgg tgagcaattc aatcactact ttgtttgctg gtttcgtgga catgcaaaag
     1021 acatatgcct cgtatgccga gcaatttgcc aagatcagga gcgtttcgca tcagttgagc
     1081 aggtgcaatt cgctgctgca cgagaatatc gccagcttgg aggcgatcaa caactttctg
     1141 gacgacgagg accggctgga gccctttgtg tggcgcaccg acgacaacaa gctgcgcggc
     1201 gaggccgagg gcgccaccgg gggcaacagc agtcggctgt ggcggctgta ggattaatca
     1261 tctccattgg tctccaaaga tttaactagc tcgtactctt cgtgtattta ttgtgtatat
     1321 taatcgttaa cgatgccgct ttatcgtgat ttttaattag taaatcaaac ttaatattaa
     1381 taa