PREDICTED: Drosophila takahashii heat shock protein beta-1

LOCUS       XM_017139794            1220 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108056116), transcript variant X1, mRNA.
ACCESSION   XM_017139794
VERSION     XM_017139794.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139794.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1220
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1220
                     /gene="LOC108056116"
                     /note="heat shock protein beta-1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     Proteins"
                     /db_xref="GeneID:108056116"
     CDS             300..878
                     /gene="LOC108056116"
                     /codon_start=1
                     /product="heat shock protein beta-6 isoform X1"
                     /protein_id="XP_016995283.1"
                     /db_xref="GeneID:108056116"
                     /translation="MAEANKRNIPIKLGDFSVIDTEFSNIRERFDSEMRKMEEEMAKF
                     RHELMNREANFFESTSSTKKTTTTSSTTNSALPSRIPKQQNYVSDISSPLIQDEGDNK
                     VLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKSVYREYNREFLLPKGVNPES
                     IRSSLSKDGVLTVDAPLPALTAGETLIPIAHK"
     misc_feature    585..830
                     /gene="LOC108056116"
                     /note="Alpha-crystallin domain (ACD) of metazoan
                     alpha-crystallin-type small(s) heat shock proteins (Hsps).
                     sHsps are small stress induced proteins with monomeric
                     masses between 12 -43 kDa, whose common feature is the
                     Alpha-crystallin domain (ACD). sHsps are...; Region:
                     metazoan_ACD; cd06526"
                     /db_xref="CDD:107247"
     misc_feature    order(585..599,618..620,624..626,630..635,741..743,
                     804..809)
                     /gene="LOC108056116"
                     /note="putative dimer interface [polypeptide binding];
                     other site"
                     /db_xref="CDD:107247"
     polyA_site      1220
                     /gene="LOC108056116"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agcaaaggag aatgcaaaac agtcgagaat ttgaaacgcg gctaactgtg cgacactcaa
       61 acatccacgt ccaagaaaca acaaccaaca accccacaca ctctcagtac tcagtgagaa
      121 ctcagcaaac gtctcgaggt ctaaatacat atagaaaaca catcgtattc cccgattttt
      181 ttttggttct tggttgctcc gtcgattagc aagtgaacaa taagctcgaa agcgcgtcga
      241 gcagaacagc agcaaccacc aaatagcaaa taaaccaaat aaccaccgca cacataaaaa
      301 tggccgaggc taacaagagg aatatcccca tcaagctggg cgacttcagc gtcatcgata
      361 cggagttcag caatatccgc gagcgcttcg actccgagat gcgaaaaatg gaggaggaga
      421 tggccaagtt ccgccacgag ctgatgaacc gcgaggccaa cttcttcgag tccaccagtt
      481 ctactaaaaa aacaacaact accagctcaa cgacaaactc ggctctgcca tcccgaatcc
      541 cgaagcaaca gaactacgtc tccgacatta gctcaccctt gatacaggat gagggcgaca
      601 acaaagtgct gaagctgcga ttcgatgtca gccagtatgc ccccgaggaa attgtggtga
      661 agaccgtcga tcagaaacta ttggtgcacg ccaagcacga ggagaagtcg gacacaaaga
      721 gcgtgtacag ggagtacaac cgggagttcc tgctgcccaa gggcgtcaat cccgagtcca
      781 tccgttcgtc cttgagcaag gacggcgtcc tgaccgtcga cgcccccctg ccagcactca
      841 ccgccggcga gacactgatt cccattgcgc acaagtgaag tgatccccag taatcccaga
      901 tcccagttat cgcagttatc cactcaccaa tcaatcaatc aatcaaccaa tcaatcacca
      961 ttgccccagg agtagaggac gtagaaggac gattaaggag gaggagttga tgtctaagat
     1021 cagattaaat catacacacc attgagttta atccaatcct atctaaatga ttaatttttt
     1081 tttggttctg acttaaagct aaaatactat gttactgact tactactcat taacttaaat
     1141 ataattcaaa ttactattaa atttgattaa tttaattcat atttataatt ttcgcattaa
     1201 acgtaatcaa ttttgtcgta