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LOCUS XM_017139793 3756 bp mRNA linear INV 09-DEC-2024 (LOC108056115), transcript variant X1, mRNA. ACCESSION XM_017139793 VERSION XM_017139793.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139793.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3756 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3756 /gene="LOC108056115" /note="uncharacterized LOC108056115; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056115" CDS 323..3289 /gene="LOC108056115" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_016995282.2" /db_xref="GeneID:108056115" /translation="MMLLRLTLVAACCLCAAQAVLHGSKDVKRREAGFDTYGPPPRPA PQYGPPPQQHVPHREYGVPQQIPFREYGPPALKYGPPKLNFLGGGGGGGGGGGSSLHE QIKTHFGVPKPFYGPPHIQHKPAPQYGPPPKPAPQYGPPPQQYGPPPPKPAPQYGPPP PQYGPPPVKIQHRPAPQYGPPPQQYGPPPPPPQLLPSPHSAPLFKPAHQPATSYGPPA SGPLNLPPKQIFDAPPPNYGPPPLPVALPGNGGPPQSTTIILTGGHPSGPSGPSGPGP VKQVQIQIDSSGHTHSVSGSQAPFHTACDGWKPIPAPIGAYVEQNHIETQGGYSQVGH GGGSFGTQYSGVGGSASGSASGSGSLIEGLSDEQLVAVALQGGGDGAHVITGPGGGNS IEAEALQAAIGSLDDSYSKPPSDSFAPGSVHAQKYQTIGGHSGGSSGGNYGPPPPPPS GNYGPPPPSGNYGPPPPPPSGNYGPPPPPSGNYGPPPSGNYGPPPSGNFGPPPPPPQF AALTSSHSNSHSSHSQSQSNVNIQYGPPSGNPQPFPQHGAGQPNKPVAYRPPVPAGLL ESIGATVQHLDQFGVKPQQQPATYIPPAANEIPLTGSSIPSLPVPQALYQPPPPPPQS APQVILQQQLPAPQPGPNFIHQQQQPKQQYLPPPPVANVRPLGPPPPQPPTQQYLPAL GPPQSSYFQQQQSQHSENSYSASQFHSQGLPLPQQAPRFNLQQQQVQQQVQQPQPIIV HDCGHGPNLLSSNGYQVQQQQQFQNFGSISAASSGAYNAISQSIPVAEQHTQQLVTGP SDSYGPPPSGNDLDYDHTGYASQKNAVAALPDGTDPQQLPGLDGLDVLSAQKSQSIQL NGQQPQQNFQVQFGGSLNNSPGVASGDANHEEILSQGLLQSILTAIEQPNGQQNLPQN HKAQSRSDEHAKDHDLDQDQDQELANEEDSEQTSSSSNRVEVRVLPEHNENEEETPAE VKEIEPIVVKEEEARH" polyA_site 3756 /gene="LOC108056115" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcatctgagc ggcagcattt tcaactcgcg actgacaagc agcggtcgac cgtcgccgat 61 ccgttgtcga gagatcagag atctcttaag aaaaatatac cgaaaacccg attcgaaccg 121 tttcgtttcg aaccgaaccg aaccgatacc gcgttatccg ttccgtgagt gtcgcgtttt 181 atttatttct ttttttttca aagtttttta cgaatccccc ccggatcctt ttgtgtgtaa 241 tcgcatcgaa tcgaaatcaa ctgcattttt tttcgagtgc tttgtgccga ggataaactt 301 aattcgcaac gcagcagctg gcatgatgct gctccgcctg actttggtgg ccgcctgctg 361 cctttgtgcc gcccaagcgg tgctccacgg ctccaaggat gtgaagcgtc gcgaggcggg 421 cttcgatact tatggtccgc ctcctcgtcc tgccccccag tatggtcctc cgccccagca 481 gcatgtgcct catcgggagt acggagtgcc gcagcagatt cccttccgcg aatacggacc 541 tccggccttg aagtacggcc ctcccaagct taactttttg ggtggaggag gaggaggcgg 601 tggaggaggt ggttcctccc tgcacgagca gatcaagacg cactttggag tgcccaaacc 661 cttctacgga ccacctcaca tccagcacaa gccggcgcct caatatggtc cacctcctaa 721 gccagctcct caatatggtc caccaccaca gcaatatggt ccaccaccac ccaagccagc 781 tcctcaatat ggtccaccac ccccgcagta tggtccacca ccagtgaaga tccagcaccg 841 cccggctcct cagtacggac caccacctca gcagtacgga cctccaccac caccaccaca 901 actgctgccc tcgccccaca gcgccccact cttcaagccc gcccaccagc cggccacctc 961 gtacggacca cccgcctccg ggccactcaa cctgccgccc aagcagatct tcgatgcccc 1021 gccacccaac tacggaccgc caccactgcc ggtggctctg ccgggcaacg ggggaccacc 1081 acagagcacc acgattatcc tgaccggagg tcatccaagt ggtcctagtg gacccagtgg 1141 tccgggaccc gtgaagcagg tgcagatcca gatcgactcc tccgggcaca cgcatagtgt 1201 gagcggctcc caggcgccct tccacacggc ctgcgatggc tggaaaccga tcccggcgcc 1261 catcggtgcc tatgtggagc agaaccacat cgagacccag ggcggctaca gccaggtggg 1321 acatggcggc ggctcctttg gcacccagta cagcggagtg ggaggaagtg ccagtggaag 1381 tgcaagtgga agtggctccc tgatcgaggg actctccgat gagcagctgg tggcagtggc 1441 tctgcaggga ggcggcgatg gagcccatgt gatcaccgga cccggaggag gcaactccat 1501 cgaggcggaa gctcttcagg ccgccattgg ttcgttggat gattcgtact cgaagccacc 1561 gtcggattcc tttgctcccg gttcggttca cgcgcagaag taccagacta tcggtggaca 1621 ttcgggaggc tcaagtggag gaaactatgg accaccacca ccacctccta gtggaaacta 1681 cggacctcca ccacccagtg gaaactacgg acctccacca ccaccgccca gtggaaacta 1741 tggaccacca ccacctccca gtggaaacta cggacctccg ccaagtggca actatggacc 1801 tccgccaagt ggaaactttg gaccaccacc gccacctccg cagtttgccg ccctcaccag 1861 cagccattcg aactcgcact cgtcccactc gcagtcgcag tcgaatgtga acatccagta 1921 cggtcctccc tccgggaatc cccagccctt cccgcagcac ggagccggtc agcccaacaa 1981 gccggtggcc tatcgtccac ctgttccagc cggtctttta gagtccattg gcgccaccgt 2041 tcagcatctg gatcagtttg gagtgaagcc ccagcagcag ccagccacct atattccacc 2101 agcagccaat gagattccgc tgacgggttc ttccatcccc tcgcttcctg ttccccaggc 2161 tctctatcag ccgcctccgc cgccgcctca gtctgcaccc caggtgatcc tgcagcagca 2221 gctgcctgct cctcagccag gacccaactt cattcaccag cagcagcagc cgaagcagca 2281 gtatctgcct cctccgccgg tggccaatgt gcgacccctg ggacctccgc cacctcagcc 2341 acccacgcag cagtatttgc ccgccctggg accacctcag tcatcctact tccagcagca 2401 gcagtcgcag cactcggaga acagctacag tgcctcgcag ttccactcgc agggtttgcc 2461 cttgcctcag caggcgcccc gcttcaatct gcaacagcag caggtgcaac agcaggtgca 2521 gcaaccccag cccatcatag ttcacgactg cggacatgga cccaatctcc tgagcagcaa 2581 tggctaccag gtgcaacagc agcagcagtt ccagaacttt ggcagcatct cggccgcctc 2641 ctcgggcgcc tacaacgcca tctcgcagag catcccggtg gccgagcagc acacccagca 2701 actggtcacc ggaccctcgg acagctacgg accaccgccc tccggaaacg atctggacta 2761 cgatcacacg ggctatgcct cgcagaagaa cgcggtggcc gccctgcccg atggcaccga 2821 tccccagcag ctgcccggtt tggatggcct tgatgtgctg tccgcccaaa agtcgcagag 2881 cattcagctg aatggccagc agccgcagca aaacttccag gtgcagttcg gcggttcgct 2941 gaacaattcg ccgggcgtcg cctccgggga tgccaatcac gaggagatcc tctcgcaggg 3001 tctgctgcag tccatcttga cggccatcga gcagcccaac ggacagcaga atttgcccca 3061 gaaccacaag gcccagagtc gctccgatga gcacgctaag gatcacgacc tcgatcagga 3121 tcaggatcag gagctggcca atgaagagga cagcgagcag acctccagct cctccaatcg 3181 cgtcgaggtg agggtgctgc ccgagcataa cgagaacgag gaggagaccc ccgccgaggt 3241 caaggagatc gaaccgatcg tggtcaagga ggaggaggcc aggcattagt catcagtcac 3301 tagttactag ttaatgactt tgatgtgact agttattagc tactagttac tcgtcactcg 3361 ttactggtta cttgttacta attactagtt actcgtcact tgttactagt tactcgttac 3421 tcgttactag ctactagtca catcaaagtt agcatcatca gcgccgcttg aacctattta 3481 ttgctgcctc atcatcatct aagagctggg agtcgtctgt cccccagttg ccataaagag 3541 aaagtaaaag gggacaggag gggattcgaa aaaaatacac aaagagaaaa aagaagctac 3601 aaaacacgcg gagtcgatcg ccgcgtgcaa aaagtgcctt ttcatgctcg cagctcgtgt 3661 ataaaaatta tttaaaataa ataattaatt tattatagca ttgtattgta ttttatgcct 3721 taaacaaaca aataaatatg tatgtaaaca gaaaaa