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LOCUS XM_017139792 3057 bp mRNA linear INV 09-DEC-2024 (LOC108056113), transcript variant X2, mRNA. ACCESSION XM_017139792 VERSION XM_017139792.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139792.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3057 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3057 /gene="LOC108056113" /note="autotransporter adhesin BpaC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056113" CDS 204..2069 /gene="LOC108056113" /codon_start=1 /product="uncharacterized protein isoform X2" /protein_id="XP_016995281.2" /db_xref="GeneID:108056113" /translation="MSTESNTPVDPRVQVELEKLNSATDNINRFEVELDESKCEFKRL LAESVVRIKAAAHKLGNSIDAAKPYYESRIYAAQLAKETQAAAANHEKAKSIHAAAKE MVYLAEQGLGEKSTLDTACQEMLSHAASKVNQSQLEVTDTRNALKMCQLKLEVANNRV GKLQGQLKQALRASRPYYETRANYNGLLKAQKSRVNELEAKVSAAKLTYNEALKNLEQ ISEDIHRQRQQRNNLLNYEAMLRQVDAQELDEEAPEEEEEEEEEPEEYLRMPDRLGGG HLLTDFEAVLTFPQKLAGGMHKSASTGAAGEDGGEGSGGGLGPLDLGLHAPYEVKSSG SGSLASGSASVSTSVGANAPADNDIEQWTEIRLSHSDSTSSSYSNQSLLEQHGLESCS GGGGGLSLGRNHLEADAQSQHSTSSSDEPKRKVTCTTIFQDDSGSSGAPGQQMSRKQS LSQWLSRSNSFKGSGRRQSLDLLIDAGDKVKDVFSYGFQKVGRSLERRNSESEMDGCG GAEGEALLGGGTGEGDSGGGASASGGAGALSGAGDFFLFSRSSEPKELLSDEQVENLL LNHTVDENGAIIVEELKSPTTTTSMYHTHQQQQQQQQQQQKQHHQALNVVGALLF" misc_feature 228..896 /gene="LOC108056113" /note="SH3 domain-binding protein 5 (SH3BP5); Region: SH3BP5; pfam05276" /db_xref="CDD:461608" polyA_site 3057 /gene="LOC108056113" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttctgttgtc ataattgtag caaaagctcg ctgaaattga tttgcctagc gatttgtgcg 61 gaaattgtgg aaactgtgcc atggaaatgg aagcaaatcg aattgaccac tgaagagaga 121 gagagtacca cagctgcact gcatccaccg cgatccccgg aaatcggaat cccccccaga 181 aagtagccgc gtagcaagaa gccatgtcaa cggagagcaa cacgccagtg gatccgcggg 241 ttcaggtgga gctagagaaa ctcaactccg ccacggacaa catcaaccga ttcgaggtgg 301 agctcgatga gtccaagtgc gagttcaagc gactgctggc cgaaagtgtg gtgcggatca 361 aggccgccgc ccacaagctg ggcaactcca tcgatgccgc caagccctac tacgaatccc 421 gcatctatgc cgcccagctg gccaaggaaa cccaggcggc ggccgccaac cacgagaagg 481 ccaagtccat ccatgccgcc gccaaggaga tggtctacct ggccgagcag ggactcggcg 541 agaagtccac gctggacacc gcctgccagg agatgctcag ccacgcggcc agcaaggtca 601 accagtccca gctggaggtc accgacaccc gcaacgccct caagatgtgc cagctgaagc 661 tcgaggtggc caacaaccgg gtcggcaagc tgcagggaca gctcaagcag gcgctcaggg 721 cctccaggcc gtactacgag acgcgggcga actacaatgg actgctgaag gcgcagaagt 781 cgcgggtcaa cgagctggag gcgaaggtca gtgcggcgaa gctgacgtac aacgaggcgc 841 tgaagaatct cgagcagatc tccgaggata tccaccggca gcggcagcag cgcaacaatc 901 tgttgaacta cgaggccatg ctgcgtcagg tggacgccca ggaactcgat gaagaggctc 961 cggaagagga ggaagaggag gaggaggaac cagaggagta cctgcgcatg ccggatcgcc 1021 tgggcggcgg ccatcttctc accgactttg aggcagtgct cacctttccc cagaagctgg 1081 ccggcggcat gcacaagtcc gccagcaccg gtgcagctgg agaggatggg ggagagggtt 1141 ccggaggagg cctgggaccg ctggacctgg gcctgcatgc tccctacgag gtgaagtcct 1201 cgggcagcgg ttctttggcc tcgggatccg cctccgtttc gacttcagtg ggtgctaatg 1261 cgccggcgga caacgatatc gaacagtgga cggagattcg actgtcgcat tcggatagca 1321 ccagttccag ctactcgaat cagtcgctcc tcgagcagca cggcctggag agctgctcgg 1381 gcggcggcgg cggcttatct ctgggccgaa accatctgga agcggacgcc cagtcgcagc 1441 actcgacctc gtcgtccgat gagcccaaac gcaaggtcac ctgcacgacg atattccagg 1501 atgacagtgg atcatctggt gctcctggcc agcagatgag ccgcaagcag agcctcagcc 1561 agtggctgtc gcgttcgaac agcttcaagg gcagcggacg aaggcagagc ctcgatctgc 1621 tgatcgatgc cggcgacaag gtgaaggatg tgtttagcta tgggttccag aaggtgggac 1681 gcagcctgga gcggcgcaac agcgagtcgg agatggatgg atgcggcgga gccgagggcg 1741 aggcgctgct gggaggcgga acaggagaag gagactccgg tggaggagca agtgcctccg 1801 gtggagctgg tgccttgtcc ggtgccggtg actttttcct cttcagcaga tcttcagagc 1861 ctaaagagct actgtccgat gagcaggttg agaatttact attaaatcac acggtggatg 1921 agaacggtgc cattatagtg gaagaactca aatcgccaac aacaaccaca agcatgtatc 1981 acacacacca acaacaacaa cagcagcagc aacaacaaca aaagcaacac catcaggcac 2041 tcaatgtggt tggagccctg ctgttttgaa ccgacagcga aataccctac acttagatta 2101 acaccaaaac gccctcactt tcactcacct ccatataatt gcagtgatgg gaaaagtatt 2161 attttttatt aaaatttgaa atattgttaa agctagcatg atatgtataa tccatacatt 2221 atcgaatttc gaaactatac ggtgaaaaag aaaaacgtaa tgtcgttgtt ttagaaattg 2281 aagaaaggga ttttctttat tattttcaga aaaaatcatt tcgatttaat gatatttttt 2341 tcaatatttt tccaagctct aaggaatatc caaaattaga aaacaattca tttattacgt 2401 ttttcgtttt cgtttcccca tcactgcagc tatattaata tgaataatgg caaaattttt 2461 actctatgag tattcgggca tcgatcttaa ctctaaaaat ccaattagtc aaaaacgtag 2521 cgtacatatc attcaagaca tcaatccaga cggatccgat cagcccgcag gaatctttta 2581 aatccacatt aacgcactca ggcgcacgtg tggcaaacta tgttctaatc ctaaataaaa 2641 tgtgcaataa tttagtttac ttagaggcat atacatacat aaataagaaa gttacatttt 2701 atgctgttta caaaaagcaa ataactaaat gctagtcaac aaacgaaatc agtttaatag 2761 tttttagtgt gtatgagcta aacattcggc aaaacaaaga tttacaaaaa cccacaaaat 2821 acataaaatt gtacaaataa tggtaaatgt ggcgtgggcg gaacgagaag ggagggggag 2881 tggcgacaac aaaacgttag tgataatagt ttatggagaa gttttgaaat attgcgcggt 2941 cagctaattg tcccagaacc ctccactctt tttccgcatg cgccactgag tgttaaatac 3001 ttgcatacat gtattaatac ctgcatacaa caaatatatg gagtgtatta tacaaaa