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LOCUS XM_017139791 3132 bp mRNA linear INV 09-DEC-2024 (LOC108056113), transcript variant X1, mRNA. ACCESSION XM_017139791 VERSION XM_017139791.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139791.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3132 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3132 /gene="LOC108056113" /note="autotransporter adhesin BpaC; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056113" CDS 204..2144 /gene="LOC108056113" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_016995280.2" /db_xref="GeneID:108056113" /translation="MSTESNTPVDPRVQVELEKLNSATDNINRFEVELDESKCEFKRL LAESVVRIKAAAHKLGNSIDAAKPYYESRIYAAQLAKETQAAAANHEKAKSIHAAAKE MVYLAEQGLGEKSTLDTACQEMLSHAASKVNQSQLEVTDTRNALKMCQLKLEVANNRV GKLQGQLKQALRASRLQLKRNLLLLRYFSIMHALYCTLCSPYYETRANYNGLLKAQKS RVNELEAKVSAAKLTYNEALKNLEQISEDIHRQRQQRNNLLNYEAMLRQVDAQELDEE APEEEEEEEEEPEEYLRMPDRLGGGHLLTDFEAVLTFPQKLAGGMHKSASTGAAGEDG GEGSGGGLGPLDLGLHAPYEVKSSGSGSLASGSASVSTSVGANAPADNDIEQWTEIRL SHSDSTSSSYSNQSLLEQHGLESCSGGGGGLSLGRNHLEADAQSQHSTSSSDEPKRKV TCTTIFQDDSGSSGAPGQQMSRKQSLSQWLSRSNSFKGSGRRQSLDLLIDAGDKVKDV FSYGFQKVGRSLERRNSESEMDGCGGAEGEALLGGGTGEGDSGGGASASGGAGALSGA GDFFLFSRSSEPKELLSDEQVENLLLNHTVDENGAIIVEELKSPTTTTSMYHTHQQQQ QQQQQQQKQHHQALNVVGALLF" misc_feature 228..971 /gene="LOC108056113" /note="SH3 domain-binding protein 5 (SH3BP5); Region: SH3BP5; pfam05276" /db_xref="CDD:461608" polyA_site 3132 /gene="LOC108056113" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttctgttgtc ataattgtag caaaagctcg ctgaaattga tttgcctagc gatttgtgcg 61 gaaattgtgg aaactgtgcc atggaaatgg aagcaaatcg aattgaccac tgaagagaga 121 gagagtacca cagctgcact gcatccaccg cgatccccgg aaatcggaat cccccccaga 181 aagtagccgc gtagcaagaa gccatgtcaa cggagagcaa cacgccagtg gatccgcggg 241 ttcaggtgga gctagagaaa ctcaactccg ccacggacaa catcaaccga ttcgaggtgg 301 agctcgatga gtccaagtgc gagttcaagc gactgctggc cgaaagtgtg gtgcggatca 361 aggccgccgc ccacaagctg ggcaactcca tcgatgccgc caagccctac tacgaatccc 421 gcatctatgc cgcccagctg gccaaggaaa cccaggcggc ggccgccaac cacgagaagg 481 ccaagtccat ccatgccgcc gccaaggaga tggtctacct ggccgagcag ggactcggcg 541 agaagtccac gctggacacc gcctgccagg agatgctcag ccacgcggcc agcaaggtca 601 accagtccca gctggaggtc accgacaccc gcaacgccct caagatgtgc cagctgaagc 661 tcgaggtggc caacaaccgg gtcggcaagc tgcagggaca gctcaagcag gcgctcaggg 721 cctccagatt gcagctcaag cgcaatttac ttttgttgag atattttagc attatgcacg 781 ctttgtattg taccctctgt tcgccgtact acgagacgcg ggcgaactac aatggactgc 841 tgaaggcgca gaagtcgcgg gtcaacgagc tggaggcgaa ggtcagtgcg gcgaagctga 901 cgtacaacga ggcgctgaag aatctcgagc agatctccga ggatatccac cggcagcggc 961 agcagcgcaa caatctgttg aactacgagg ccatgctgcg tcaggtggac gcccaggaac 1021 tcgatgaaga ggctccggaa gaggaggaag aggaggagga ggaaccagag gagtacctgc 1081 gcatgccgga tcgcctgggc ggcggccatc ttctcaccga ctttgaggca gtgctcacct 1141 ttccccagaa gctggccggc ggcatgcaca agtccgccag caccggtgca gctggagagg 1201 atgggggaga gggttccgga ggaggcctgg gaccgctgga cctgggcctg catgctccct 1261 acgaggtgaa gtcctcgggc agcggttctt tggcctcggg atccgcctcc gtttcgactt 1321 cagtgggtgc taatgcgccg gcggacaacg atatcgaaca gtggacggag attcgactgt 1381 cgcattcgga tagcaccagt tccagctact cgaatcagtc gctcctcgag cagcacggcc 1441 tggagagctg ctcgggcggc ggcggcggct tatctctggg ccgaaaccat ctggaagcgg 1501 acgcccagtc gcagcactcg acctcgtcgt ccgatgagcc caaacgcaag gtcacctgca 1561 cgacgatatt ccaggatgac agtggatcat ctggtgctcc tggccagcag atgagccgca 1621 agcagagcct cagccagtgg ctgtcgcgtt cgaacagctt caagggcagc ggacgaaggc 1681 agagcctcga tctgctgatc gatgccggcg acaaggtgaa ggatgtgttt agctatgggt 1741 tccagaaggt gggacgcagc ctggagcggc gcaacagcga gtcggagatg gatggatgcg 1801 gcggagccga gggcgaggcg ctgctgggag gcggaacagg agaaggagac tccggtggag 1861 gagcaagtgc ctccggtgga gctggtgcct tgtccggtgc cggtgacttt ttcctcttca 1921 gcagatcttc agagcctaaa gagctactgt ccgatgagca ggttgagaat ttactattaa 1981 atcacacggt ggatgagaac ggtgccatta tagtggaaga actcaaatcg ccaacaacaa 2041 ccacaagcat gtatcacaca caccaacaac aacaacagca gcagcaacaa caacaaaagc 2101 aacaccatca ggcactcaat gtggttggag ccctgctgtt ttgaaccgac agcgaaatac 2161 cctacactta gattaacacc aaaacgccct cactttcact cacctccata taattgcagt 2221 gatgggaaaa gtattatttt ttattaaaat ttgaaatatt gttaaagcta gcatgatatg 2281 tataatccat acattatcga atttcgaaac tatacggtga aaaagaaaaa cgtaatgtcg 2341 ttgttttaga aattgaagaa agggattttc tttattattt tcagaaaaaa tcatttcgat 2401 ttaatgatat ttttttcaat atttttccaa gctctaagga atatccaaaa ttagaaaaca 2461 attcatttat tacgtttttc gttttcgttt ccccatcact gcagctatat taatatgaat 2521 aatggcaaaa tttttactct atgagtattc gggcatcgat cttaactcta aaaatccaat 2581 tagtcaaaaa cgtagcgtac atatcattca agacatcaat ccagacggat ccgatcagcc 2641 cgcaggaatc ttttaaatcc acattaacgc actcaggcgc acgtgtggca aactatgttc 2701 taatcctaaa taaaatgtgc aataatttag tttacttaga ggcatataca tacataaata 2761 agaaagttac attttatgct gtttacaaaa agcaaataac taaatgctag tcaacaaacg 2821 aaatcagttt aatagttttt agtgtgtatg agctaaacat tcggcaaaac aaagatttac 2881 aaaaacccac aaaatacata aaattgtaca aataatggta aatgtggcgt gggcggaacg 2941 agaagggagg gggagtggcg acaacaaaac gttagtgata atagtttatg gagaagtttt 3001 gaaatattgc gcggtcagct aattgtccca gaaccctcca ctctttttcc gcatgcgcca 3061 ctgagtgtta aatacttgca tacatgtatt aatacctgca tacaacaaat atatggagtg 3121 tattatacaa aa