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LOCUS XM_017139781 3247 bp mRNA linear INV 09-DEC-2024 sobremesa (sbm), transcript variant X2, mRNA. ACCESSION XM_017139781 VERSION XM_017139781.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139781.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3247 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3247 /gene="sbm" /note="L-type amino acid transporter sobremesa; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056104" CDS 70..1668 /gene="sbm" /codon_start=1 /product="b(0,+)-type amino acid transporter 1 isoform X2" /protein_id="XP_016995270.1" /db_xref="GeneID:108056104" /translation="MYQHVQPNNTNHIHANGHNVPTKATTNGTMCANGSLGTEGPEAP ETDASGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLV RTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWV STLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLG MAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWA YDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAV AVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVR RLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNHPR PYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRF MNKVTLFFQLLLEVVPTSSMAMFE" misc_feature 199..1638 /gene="sbm" /note="L-type amino acid transporter; Region: 2A0308; TIGR00911" /db_xref="CDD:273332" polyA_site 3247 /gene="sbm" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gacgctttca ttctctcgca gtgtttaaag tgacatgaaa gtgacgacat tggcgcactg 61 tagcaagtca tgtatcagca tgtccaacca aacaacacaa atcatattca cgccaatgga 121 cataatgtgc caacaaaagc aacgaccaac gggaccatgt gcgccaatgg gtctcttggg 181 acagaagggc ccgaagcgcc agagaccgac gcatcaggga ccgggaggat gcggaagccg 241 ctggagagga atggctcaac gcagaaccac gttgttcacc tcgagagaag gctgggcctc 301 ttcagtgggg tggctttaat tgttggaacg atgatagggt ctggaatttt tgtgtcaccc 361 tccggtttac tggttcgcac tggttccgtt ggagttagct ttataatctg gcttgcctgt 421 ggtgtgctct ccctgctggg cgctctggca tacgctgaac ttggcacgat gaacacgtcg 481 tcgggggcgg aatgggccta ctttatggac gcctatggac cggcgccggc gtttctgttc 541 tcatgggtat cgactttggt gttgaagcca tctcaaatgg ctataatatg cttatcattt 601 gcacagtacg ccgttgaggc ctttgtgacg gaatgcgatc cgcccagggg cgtggtcaag 661 atggtcgccc tggtggcaat tgtgatgatc ctgttcgtga actgctacag cgtcaacctg 721 ggcatggccg tccagaacgt gttcaccgcc gccaaactgg tggccgtggt ggtcgtgatc 781 tgcggcggag cctggaaact gatgcagggc aacacgcagc acctgtcgaa tgcatttaac 841 ggcccgatgc cgaatgtcgg ggccatcgcc acggccttct acacgggcct gtgggcctac 901 gatggctgga acaacctgaa ctacgtaacg gaggagatca agaacccgag caagaacctg 961 ccgcgctcga tcatcatcgg cataccgctg gtgacgctct gctatgcgct gatcaacatc 1021 tcctacctgg cggccatgtc gccgcaggag atgatcgagt cggaggcggt ggccgtcacc 1081 ttcggcaacc gcatcctggg ggctttggcc tggctgatgc ccctcagcgt caccatcagc 1141 acctttggca gcgccaatgg cacgctcttc gcagctggcc gcctgtgctt tgcggccagt 1201 cgagagggtc acctgctgga cattctctca tatgtccatg tgcgccgtct aacacctgct 1261 ccggggctga tattccactc gctgattgcc tctgcaatgg tgctgcatgg cacgattgat 1321 tcgctgattg atttcttcag cttcaccgcc tggatattct acggcggagc gatgctggcc 1381 ctgatcgtga tgcgctacac caagcccaac catccgcggc cctacaaggt gccgatcatc 1441 attcccgttg tggtcttggt catctccgtg tatctcgtgg cggcacccat tttcgagacc 1501 ccgcgcgttg agtacctcta cgccctgctc ttcatcttcg cgggcctgat cttctacgtg 1561 ccgttcgtca agctcgggat gacgccgagg ttcatgaaca aggtgacgct attcttccag 1621 ctgctgttgg aggtggtgcc cacctcttcg atggccatgt tcgagtgaag aatcccccga 1681 aaagtgctca agttacgggt attggggtca ccaatctcgg aagagagaag gagagaagca 1741 aatacattca cttaattact atacaaacga ggatatatga ggagtgaagc agacaagcta 1801 caaggatggg aagttagacg atgtttaaga gtggaacgtt aagagcaacc tatattgata 1861 tactgacgtt gtcgttgaca aagtagtgct agagaaacag aaacagaaaa ctatttgaaa 1921 tagtcttttt atgctatgag ctggttatat tcaagattat atatgaatat acggatattt 1981 agtgtggata catagacatt tgtgtatctt attgtgtagc gcgcgtaggc caagttgcat 2041 agtttataca aacgaaacag atctatatat acatatattt ttgtgttcta ttagttaaag 2101 atccaagaca aatgacagaa acaactgaaa aactgaaaaa acagaagaaa aacacaaaca 2161 cacacacact tgaacagtcg aaagaaaata tatttgccaa gcggttggaa aagtaaggtg 2221 tttaggaagg ggttttggga tttgtgtaca gtgccgccag gaatcgctga aaaccaccaa 2281 tatccgtaca ctacccacct aagacgacac tcgcttaacc ttgtttcatt tctcatttgg 2341 attttccgtt ggcgttatac gttataccca cataatatac gagtttaacg atctagagat 2401 cggctggaat agcaatattt atatactata tgtgtgtgat ggagcgggga taatgaagga 2461 aacccaaaaa ggacgaaaag cttaatacaa actgaatacc aactgaatgt ttcgaacttt 2521 gtgcgacaaa agcgccacct ggcggtgtga aattcgtagg actgcaaata ggcattaaag 2581 atttgtaatt gataccaaag tagggtaaac agaaaacaaa cactgagaaa aattcaaaca 2641 aaaaaataga aaaaaggatg aaaaaagaga aaagcaaacc taaatataaa taccactatg 2701 gatacttgtt aaatacattt tttttgcgac ctctgtctgc tttgacaaat cgttgcaacc 2761 aaagctagaa ttagacttag agagacggtt aacttctatt aaaattacta ttactatgcc 2821 ttttttttta ccatttaaat ttgatttcgg ttataacacg agttagaaaa agacagcaaa 2881 tgcaggtgcc gtctcgctcg cacccacata caagaattta aaattttttt ttaataatat 2941 atttcctttt ttttgctatg ctctcatgtt ctcaattgtc tgaaaccgat atacaaataa 3001 atttatatct ttacctattt atagggaaaa ctacagaact taaacacaca catgaaaata 3061 tatatttata taatttgtta agtttataaa ttttataatt tttattacca aatatttaca 3121 atgagctaaa aacggtaacc agaacaaatc gaaaatctct atctatacat gtacctacca 3181 cctaaacaaa caaaacaatt gtattatgta aaccagaaat tgacgaaata aagtttttga 3241 aacacaa