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LOCUS XM_017139780 3380 bp mRNA linear INV 09-DEC-2024 sobremesa (sbm), transcript variant X1, mRNA. ACCESSION XM_017139780 VERSION XM_017139780.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139780.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3380 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3380 /gene="sbm" /note="L-type amino acid transporter sobremesa; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108056104" CDS 176..1801 /gene="sbm" /codon_start=1 /product="b(0,+)-type amino acid transporter 1 isoform X1" /protein_id="XP_016995269.1" /db_xref="GeneID:108056104" /translation="MRDKISQLFCLQKNACKNNSTDNNRGHNVPTKATTNGTMCANGS LGTEGPEAPETDASGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGI FVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGP APAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILF VNCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIA TAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSP QEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLL DILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVM RYTKPNHPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPF VKLGMTPRFMNKVTLFFQLLLEVVPTSSMAMFE" misc_feature 332..1771 /gene="sbm" /note="L-type amino acid transporter; Region: 2A0308; TIGR00911" /db_xref="CDD:273332" polyA_site 3380 /gene="sbm" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgccgccca ctgcgctaca ttttcagttg gcccgctctc tggtttttcg aaaacatttc 61 ttctattcta ttcgcatata catataccta taagtatata agtatatatt tcgtattcgc 121 tgagagctga aattcgcggc gaaataattt tagcaacttg ttatccgtcc atgccatgcg 181 cgataaaata tcacaactat tttgcttgca aaagaacgca tgcaaaaata attcaacaga 241 taataacaga ggacataatg tgccaacaaa agcaacgacc aacgggacca tgtgcgccaa 301 tgggtctctt gggacagaag ggcccgaagc gccagagacc gacgcatcag ggaccgggag 361 gatgcggaag ccgctggaga ggaatggctc aacgcagaac cacgttgttc acctcgagag 421 aaggctgggc ctcttcagtg gggtggcttt aattgttgga acgatgatag ggtctggaat 481 ttttgtgtca ccctccggtt tactggttcg cactggttcc gttggagtta gctttataat 541 ctggcttgcc tgtggtgtgc tctccctgct gggcgctctg gcatacgctg aacttggcac 601 gatgaacacg tcgtcggggg cggaatgggc ctactttatg gacgcctatg gaccggcgcc 661 ggcgtttctg ttctcatggg tatcgacttt ggtgttgaag ccatctcaaa tggctataat 721 atgcttatca tttgcacagt acgccgttga ggcctttgtg acggaatgcg atccgcccag 781 gggcgtggtc aagatggtcg ccctggtggc aattgtgatg atcctgttcg tgaactgcta 841 cagcgtcaac ctgggcatgg ccgtccagaa cgtgttcacc gccgccaaac tggtggccgt 901 ggtggtcgtg atctgcggcg gagcctggaa actgatgcag ggcaacacgc agcacctgtc 961 gaatgcattt aacggcccga tgccgaatgt cggggccatc gccacggcct tctacacggg 1021 cctgtgggcc tacgatggct ggaacaacct gaactacgta acggaggaga tcaagaaccc 1081 gagcaagaac ctgccgcgct cgatcatcat cggcataccg ctggtgacgc tctgctatgc 1141 gctgatcaac atctcctacc tggcggccat gtcgccgcag gagatgatcg agtcggaggc 1201 ggtggccgtc accttcggca accgcatcct gggggctttg gcctggctga tgcccctcag 1261 cgtcaccatc agcacctttg gcagcgccaa tggcacgctc ttcgcagctg gccgcctgtg 1321 ctttgcggcc agtcgagagg gtcacctgct ggacattctc tcatatgtcc atgtgcgccg 1381 tctaacacct gctccggggc tgatattcca ctcgctgatt gcctctgcaa tggtgctgca 1441 tggcacgatt gattcgctga ttgatttctt cagcttcacc gcctggatat tctacggcgg 1501 agcgatgctg gccctgatcg tgatgcgcta caccaagccc aaccatccgc ggccctacaa 1561 ggtgccgatc atcattcccg ttgtggtctt ggtcatctcc gtgtatctcg tggcggcacc 1621 cattttcgag accccgcgcg ttgagtacct ctacgccctg ctcttcatct tcgcgggcct 1681 gatcttctac gtgccgttcg tcaagctcgg gatgacgccg aggttcatga acaaggtgac 1741 gctattcttc cagctgctgt tggaggtggt gcccacctct tcgatggcca tgttcgagtg 1801 aagaatcccc cgaaaagtgc tcaagttacg ggtattgggg tcaccaatct cggaagagag 1861 aaggagagaa gcaaatacat tcacttaatt actatacaaa cgaggatata tgaggagtga 1921 agcagacaag ctacaaggat gggaagttag acgatgttta agagtggaac gttaagagca 1981 acctatattg atatactgac gttgtcgttg acaaagtagt gctagagaaa cagaaacaga 2041 aaactatttg aaatagtctt tttatgctat gagctggtta tattcaagat tatatatgaa 2101 tatacggata tttagtgtgg atacatagac atttgtgtat cttattgtgt agcgcgcgta 2161 ggccaagttg catagtttat acaaacgaaa cagatctata tatacatata tttttgtgtt 2221 ctattagtta aagatccaag acaaatgaca gaaacaactg aaaaactgaa aaaacagaag 2281 aaaaacacaa acacacacac acttgaacag tcgaaagaaa atatatttgc caagcggttg 2341 gaaaagtaag gtgtttagga aggggttttg ggatttgtgt acagtgccgc caggaatcgc 2401 tgaaaaccac caatatccgt acactaccca cctaagacga cactcgctta accttgtttc 2461 atttctcatt tggattttcc gttggcgtta tacgttatac ccacataata tacgagttta 2521 acgatctaga gatcggctgg aatagcaata tttatatact atatgtgtgt gatggagcgg 2581 ggataatgaa ggaaacccaa aaaggacgaa aagcttaata caaactgaat accaactgaa 2641 tgtttcgaac tttgtgcgac aaaagcgcca cctggcggtg tgaaattcgt aggactgcaa 2701 ataggcatta aagatttgta attgatacca aagtagggta aacagaaaac aaacactgag 2761 aaaaattcaa acaaaaaaat agaaaaaagg atgaaaaaag agaaaagcaa acctaaatat 2821 aaataccact atggatactt gttaaataca ttttttttgc gacctctgtc tgctttgaca 2881 aatcgttgca accaaagcta gaattagact tagagagacg gttaacttct attaaaatta 2941 ctattactat gccttttttt ttaccattta aatttgattt cggttataac acgagttaga 3001 aaaagacagc aaatgcaggt gccgtctcgc tcgcacccac atacaagaat ttaaaatttt 3061 tttttaataa tatatttcct tttttttgct atgctctcat gttctcaatt gtctgaaacc 3121 gatatacaaa taaatttata tctttaccta tttataggga aaactacaga acttaaacac 3181 acacatgaaa atatatattt atataatttg ttaagtttat aaattttata atttttatta 3241 ccaaatattt acaatgagct aaaaacggta accagaacaa atcgaaaatc tctatctata 3301 catgtaccta ccacctaaac aaacaaaaca attgtattat gtaaaccaga aattgacgaa 3361 ataaagtttt tgaaacacaa