Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017139771 3857 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017139771 VERSION XM_017139771.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139771.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3857 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3857 /gene="CoRest" /note="REST corepressor; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 Proteins" /db_xref="GeneID:108056100" CDS 306..2762 /gene="CoRest" /codon_start=1 /product="REST corepressor isoform X1" /protein_id="XP_016995260.2" /db_xref="GeneID:108056100" /translation="MVLAERNTTDVVRNGRRSRGPSPNTHTPGGGGVANNANSLVGGG GGGGGNSGNPNANEKNASTAVPGAGTPESSDDDNSTKRNGKSKAKQSEYEEKIRVGRD YQAVCPPLVPEVERRPEQMNERALLVWSPTKEIPDLKLEEYISVAKEKYGYNGEQALG MLFWHKHDLERAVMDLANFTPFPDEWTIEDKVLFEQAFQFHGKSFHRIRQMLPDKSIA SLVKYYYSWKKTRHRSSAMDRQEKTIKAVVKDGSENGSEVGSNEESDNDDKKGQHGSN SNNNATDNTTNSTTNNTTNSPANTNATSNSNNNHTNSNNVGNNQNNNNGDENNQGGGG SNNSSNNTSHNDLDTDQLSLLAGGAGNADEVLGFGLSADGATPNGSNNNNNGEIGDLR RVVVGGFCKICNVVCHVLHDSPLGRMCKSCHTHWRRTGNRRPISGPESNAPRRSTHNC AATADRSKRKPPKGMYINHDDLTALASCKNPSVYLAERDRKITALMAEIQKNRQMMEQ LDKECDAINVEDAASTKPTAAAAANSASEPAQPRISARWSPDEIQVALCAIREYGKNY PIIAKLVTTKTEAHVRTFFVNNRRRYNLDQLVKEYEAVKSEESGPEEQNNEPAATDAT AAAATATAAASATANAAVDSATAASVASTETSNNSGGVVEASQESLAKKEEHKKPEPA AAAGEATDATVPTTVASTSSSTASAPSNKSSSGTITITDESDTATNSSSDVVAPGAVA TGSATTAAASTASSALPASQAKSQGSEEPASGAVASGTPPPAAVANPPSKRDSSVMAI AEQPPAKKIALSGGVEFLGK" misc_feature 594..752 /gene="CoRest" /note="ELM2 domain; Region: ELM2; pfam01448" /db_xref="CDD:460214" misc_feature 858..992 /gene="CoRest" /note="'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is...; Region: SANT; cl21498" /db_xref="CDD:473887" misc_feature order(861..863,948..953,957..962,966..974,978..986) /gene="CoRest" /note="putative DNA binding site [nucleotide binding]; other site" /db_xref="CDD:212559" misc_feature 1941..2072 /gene="CoRest" /note="Myb-like DNA-binding domain; Region: Myb_DNA-binding; pfam00249" /db_xref="CDD:459731" polyA_site 3857 /gene="CoRest" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tttcgcgttt cagtttgggt ttcagttacc tgcgcgcaac aaccccattc tgccattctg 61 cccttcgcag cggtgcctgg cttgcagttt cgggccaaaa gattggtgga cactggacag 121 tggccactgg ctagtagcgt tccgcgttca ccaggcccag cctacgtaag cgggcgaaag 181 caggccgtaa tccgtgtgtg tgtgatcctg ggccgccgcc agagaaccag tgctcgacaa 241 gtgtttggtg aacagctagc accctggaga agcaaaacaa gcgcgcccag ctcatccggg 301 acaagatggt gttggcggag cgcaacacca cggacgtggt gcggaacggt cgtcggtcgc 361 gcggtcccag tcccaatacc cacacgcccg gcggcggtgg ggtggccaac aatgccaaca 421 gcctcgtggg cggtggcgga ggaggcggcg ggaactccgg gaacccgaat gccaacgaga 481 agaacgcctc cacagccgtg ccgggcgcag ggacgccgga gagctcggac gacgacaact 541 ccaccaagcg caatgggaaa agcaaggcca agcagtcgga gtacgaagag aaaatccgcg 601 tgggtcgcga ctaccaggct gtgtgcccgc ctttggttcc ggaggtggag cggaggcccg 661 aacagatgaa cgaacgcgca ctcctcgtct ggtcgcccac caaggagatt cccgatctga 721 aattggagga gtacatctcg gtggccaagg agaagtacgg ctacaacggc gaacaggctc 781 tgggcatgct cttctggcac aagcacgacc tggaacgggc cgtcatggat ctggccaact 841 tcacgccctt cccggacgag tggaccatcg aggataaggt gctgttcgag caggccttcc 901 agtttcacgg gaagagcttc caccgcatcc gccagatgct gccggacaaa tcaatagcca 961 gtttggtcaa gtattactac tcgtggaaga agacgcgcca tcgcagcagc gccatggatc 1021 gccaggagaa gaccatcaag gcggtggtca aggatggctc cgagaacggc agcgaggtgg 1081 gcagcaatga ggagtctgat aacgatgaca agaaggggca acatggcagc aatagcaaca 1141 acaatgcaac cgacaacacc acaaactcga caaccaacaa caccacaaat tcccccgcaa 1201 acaccaatgc caccagcaac agcaacaaca atcacaccaa cagcaacaac gtgggcaaca 1261 accagaacaa caacaacggg gatgagaaca accaaggcgg cggcggaagc aacaacagca 1321 gcaacaacac gagccacaac gatctggaca ccgatcagtt gtccctcctc gcaggaggag 1381 caggaaacgc cgacgaggtg ctgggatttg gcctttctgc cgatggtgcc acccccaatg 1441 ggagcaacaa caacaacaat ggcgaaattg gagatctgcg tcgcgtggtt gtgggcggtt 1501 tttgcaagat ttgcaacgtg gtctgccacg tgctgcacga ttcaccgctg ggtcggatgt 1561 gcaagagttg tcacacccac tggaggcgca cgggcaaccg gcgacccatt tccgggccgg 1621 agagcaatgc tccccgaaga tccacccaca attgcgccgc cacggccgat cggtccaagc 1681 gcaagccgcc caaggggatg tacatcaacc atgacgacct gacggccctc gcgagctgca 1741 agaatcccag tgtctacttg gcggaacgcg atcgcaagat cacagccctg atggccgaaa 1801 tccagaagaa taggcagatg atggagcagc tggacaagga gtgcgatgcg atcaacgtcg 1861 aggatgcggc ctccaccaag ccaacggcgg cggcggcggc caacagcgca tccgaacccg 1921 ctcagccacg catctccgcc cgctggtcgc cggacgagat tcaggtggcc ctgtgcgcga 1981 tacgcgagta cggcaaaaac tatcctatca ttgccaagct ggtgaccacc aagacggagg 2041 cgcatgtgcg cacctttttt gtgaacaatc ggcgtcgcta caatctggac cagctggtca 2101 aggagtacga ggctgtcaag tctgaggagt cgggccccga ggagcagaac aacgagccag 2161 cagccaccga tgcaacagca gcagcagcga ctgcaacagc ggctgcatcc gcaacagcaa 2221 acgcagctgt ggattccgca accgcagcga gcgtagcatc cacagaaacc agcaacaaca 2281 gcggaggagt ggtcgaagct agccaggaat cgctggccaa gaaggaggag cacaagaagc 2341 ccgaacctgc tgctgctgcc ggcgaagcaa cggatgccac ggtgcccacc acggtggcct 2401 ccacctcctc cagcacagcc tctgctccga gcaacaagtc cagcagtggt acaatcacca 2461 tcaccgatga gtccgacacg gccaccaatt cgagcagcga tgtggtggcc ccgggagcgg 2521 tggctactgg aagcgccacc actgctgctg cgtccactgc cagctctgct ctgcccgcat 2581 cccaagccaa gtcgcagggc agcgaagagc cagcgagtgg tgccgttgcc tcgggaactc 2641 ctccgccggc agccgttgct aatcccccca gcaagcggga tagctccgtg atggccattg 2701 ccgagcagcc gccggccaag aaaatcgcgc taagcggcgg tgtcgagttc ctgggcaagt 2761 gaggagaccc ccgataaata tataccggta tataggatag cttcaaggag acgacagaca 2821 ggctgggggt actcacgtcc aagggtggtg cagcctgctc accggattcc ttatccgttc 2881 tcttcttttt tttttgaatt gtctttaaat cttgggacgc atttattatg tgaaaagcat 2941 caagcatcac ggcttaaact aggcttttag aaattagttt ctattttcgg ggtaacattt 3001 agaggatacc ctgaattgag gattgtacat gcataaacac gcacgtaatc tttgactctg 3061 aagcaggcga agaagtcgta cccagaaatt tgattgagca tagataaatt cagtacttat 3121 tatttcggtt gaataatagt cgtctatgaa aacagatctt ggaaccatat aaattactta 3181 taactacacc tgggtacggc cctggtaaat gggggaagaa tctttcacaa catttgtata 3241 ggtcagagat gatttttaat gggtttaacg ggtaagaggg cactctccta agcttcgtag 3301 gccacacaaa actaacgagt agtgcacaca caacagaaaa cattagattc gcgggagagt 3361 tagtgctgat tatgtatgta acattatgat aatgagttta tacacatgta aattattaac 3421 ttaactgtcg tacgtttttt tttgtcgtga ataatttagc atacagccag gtccttggga 3481 caggcgtacc cattatatac aatctggaga atcacccatc catccggcct caattcagcc 3541 acttcagcaa cgagtttctg ttaggctaaa tataatgtaa ctaaaaacac agttggcaac 3601 tggcaacaat tgtatacaac cagcgctatt cgtttaagaa caaaaaaatc attaaatatg 3661 tacaagtaat acgacaaaat attcggtcat cttactaaaa atcctaggat cctaagaatc 3721 tgccgatttc gaattccctg tccccttctt cttagtaaaa gtggtctgaa caagaagtta 3781 gcacatctcg gattcggaac agtcggtgtc caatgaattg ttaatattac aaataaatat 3841 aaatataatt cacaaaa