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PREDICTED: Drosophila takahashii RNA-binding motif protein 13


LOCUS       XM_017139760            1874 bp    mRNA    linear   INV 09-DEC-2024
            (Rbm13), mRNA.
ACCESSION   XM_017139760
VERSION     XM_017139760.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139760.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1874
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1874
                     /gene="Rbm13"
                     /note="RNA-binding motif protein 13; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108056095"
     CDS             120..1139
                     /gene="Rbm13"
                     /codon_start=1
                     /product="protein MAK16 homolog"
                     /protein_id="XP_016995249.2"
                     /db_xref="GeneID:108056095"
                     /translation="MQHDDVVWSIINKSFCSHKVKTDTRTFCRHEYNLTGLCTRRTCP
                     LANSQYATVREEKGIIYLFVKTAERSHMPSKLWERIKLSRNFEKAIEQINENLVFWPK
                     YMIAKNKQRFLKITQYLMRMRKLKLRRQKLIVPLSTKIERREARREEKALVAAKIDNH
                     IEKALMDRLKHGTYRDIYNFSQTAFNKALEAERVDEEDEELDDEEDEELEREMEVDAD
                     DSREAVELQRDLLEEEFVEADTDNEEEEDDEDNDEEDDYDSDSGKREEVEVGSDFEES
                     DDDPDADDIEDIKVPAKKSPASKSKKDKKPKSPAPSRRSRSKPKLELEYEYEVEKEAP
                     RQLRH"
     misc_feature    120..686
                     /gene="Rbm13"
                     /note="Protein MAK16 homolog; Provisional; Region:
                     PLN00040"
                     /db_xref="CDD:215038"
     misc_feature    567..>821
                     /gene="Rbm13"
                     /note="Mak16 protein C-terminal region; Region: Mak16;
                     pfam04874"
                     /db_xref="CDD:461462"
     polyA_site      1874
                     /gene="Rbm13"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaacctatcg ccaatcgata gcatataata ttgtgagctg cacgtgttcc attttaaatt
       61 ggtgattttc tcggatttag cgagttttag tgagctaatt caaaaaaccc agggccgcca
      121 tgcagcacga cgatgtggtt tggagcatca tcaacaagtc cttctgttcg cacaaagtca
      181 agaccgacac gcgcaccttc tgccgccatg agtacaattt gacgggtctc tgcacgcggc
      241 gaacctgccc gctggccaat tcgcaatatg ccaccgttcg cgaggagaag ggcatcattt
      301 atttgttcgt caagacggcg gagcgatcgc atatgcccag caagctgtgg gaaaggatca
      361 agctgagcag gaacttcgag aaggccatcg aacagatcaa cgagaacctg gtcttctggc
      421 ccaaatacat gatagccaag aacaagcagc gtttcctcaa gatcacccag tatctgatgc
      481 gaatgcgcaa gctgaagctg cgccgccaga agctcattgt gccgctgtcc acgaagatcg
      541 agcgtcggga ggcgcggcgc gaggagaagg ccttggtggc cgccaagatc gacaatcaca
      601 tcgagaaggc gctgatggat cgtctgaagc atggcaccta tcgcgacatt tacaacttct
      661 cacagaccgc ttttaacaag gctctggagg cggagcgtgt ggacgaggag gatgaggagc
      721 tggacgacga ggaggacgag gagctggagc gcgaaatgga ggtggacgcc gatgattccc
      781 gcgaggctgt cgagctgcag cgcgacctgc tcgaggagga gttcgtggag gcggacacag
      841 ataatgagga ggaggaagat gatgaggata acgacgagga ggacgactac gacagcgact
      901 ctggcaagcg ggaggaggtc gaggtgggca gcgatttcga agagtccgac gacgatccgg
      961 atgctgatga cattgaggac atcaaagtgc cagccaagaa atccccagcc agcaaatcga
     1021 agaaggacaa gaagcccaag tcaccggcgc ccagtcgtcg cagccgctcg aaacccaaat
     1081 tggagctgga gtacgagtat gaagtggaga aggaggcgcc aaggcagttg cgccattagc
     1141 caggtccaca caatattccc ctcaaccccc attcacctcc cacacttagc tgttaacgct
     1201 tattgtttag cccactaaat ttgtaatgcc ggttaagaat agtattttat aaaaaagaaa
     1261 gcaaaaaaaa cacagaaaaa tcgtgtgaac tattgtgcat ccccagcatc ccacgatgca
     1321 tctgtctgtc tcgctcgctt tgccttttct gaccaaaaaa ggctgctaac tgacattgaa
     1381 agtgcgtgcg attgagaggg ttaagacaca agggggttaa gcgcatatgg cggctaaaaa
     1441 ccagtttgca aaaatattct ataaaaacta taaacaattt ctgtcagagc aatagttatt
     1501 tcgcataccc tgtaaattgt tcggagttgc agagcaaatt agccaaataa ttcattttca
     1561 ttagtggaat ttaaggcatt acttacatag gtttactttt tgtaataaac aaattctcaa
     1621 tctacaaata tgttattttt ttaaaatctt attttctcta atttcatttg caatttatta
     1681 taaattattt tctaattcgt gttttttttt tagattttta tgtccatttg ttttgggtga
     1741 tttttcctac ttcttgcttc ttttttataa agaatattat agagttctgt agattcataa
     1801 aagttttatt atatcggtgg tataaatata tatctacaat atgttaaaaa ataaaggtga
     1861 tatgtagaaa aata