Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017139736 7500 bp mRNA linear INV 09-DEC-2024 protein na (na), transcript variant X2, mRNA. ACCESSION XM_017139736 VERSION XM_017139736.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139736.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7500 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7500 /gene="na" /note="sodium leak channel non-selective protein na; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056083" CDS 161..6730 /gene="na" /codon_start=1 /product="sodium leak channel NALCN isoform X2" /protein_id="XP_016995225.2" /db_xref="GeneID:108056083" /translation="MIDRLQIRRLGAAARNKRAGGGGVAGAGGGGAGGGGGAGGGGAG GSVPGAATGAAATPVSHHSHPYSTSGINTPATASTSSSSGNSLTPQQQQQQQHHHGHH FNQHHHHPPPHSHHHPHSTHSHPIHSHPHTHPHAHPHPHLRHSQPASASQFSFNPSPG SSPGNGLGLGARQDAASALNSPTTIVNSGSGSGGGSSVAFGMQPQQQQQSLPGGGGGS STTAAPSSGGHNNGAGLGSAIGGGGGGGGGLNLLGGLGGMGGMGGGAAAAGMGICGGI SSTVGSAAITGVPPIGLGIATGIGNKIMLGRKQSLKGGEPFLADYGPEESLNESADIE WVNKLWVRRLMRLCALVSLTSVSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAK MHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRP LIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQFFGELKN HCVMNNTSYDEKNRPVLTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGF NGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVFI AVITETFNEIRVQFQQMWGARGHIQKTAASQILSGNDSGWRLVTIDDNKHGGLAPETC HAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYIELVFTCLLDLET LFKIYCLGWRGYYKHSIHKFELLLAAGTTLHIVPMFYPSGLTYFQVLRVVRLIKASPM LEGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLFCFLCDFTKFESFPEAFMSMFQ ILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVILDNLELDED IKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFMKH FVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITH IINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKNVRSGSIKLKQT YEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDLRENHPFFDT PLFLVPRESRFRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGLVTYLDWVMI FATTLSCISMMFETPNYRVMDHPTLQIAEYGFVIFMSLELALKILADGLFFTPKAYIK DVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLVPHMRKVVYE LCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISRREDCVGVFMRRVFV TKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGWLDVRDVLIK AVGPVHAVYIHIYIFLGCMIGLTLFVGVVIANYSENKGTALLTVDQRRWCDLKKRLKI AQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIKGEVHTERLV IVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIILQTILRNDLSY FFGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFYALAGTILFG TVKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYCTLGNNYWETDC GNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYADIRNFQNTWN IVDIHQRGVIPVRRVKFILRLLKGRLECDPQKDRLLFKYMCYELDKLHNGEDVTFHDV INMLSYRSVDIRKALQLEELLAREEFEYLVEEEVAKMTIRTWLEGCLKKIRAQNASKQ QNSLIAGLRATNEQPVMRPNVQEDKAPLGGAADKSAISTISGAVAGACPLPTSDAFSP TFSSTENEEKDGSSSAAVQVVQDTPSSGAIGTGTSSVVAMGPPPSVQTPAARHVMTVG KRGYALNRSDSTGSSAGRKFLAPTSSDPQQRSTLSDKERLHISSQQRKKNSMTTLPHA GQLGQLAKQRGGGGGEASKSSSFFAQLNSEMGQQFHYPTISAGVHGYGHGHGQHGHHQ QGGGGGGALGSPSAMMSQMIGGSGKLLPFNNQANAVYEVHDWWQEQVLCPQTSDDEI" misc_feature 1190..2071 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2222..2890 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3752..4573 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature <4589..4705 /gene="na" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 4715..5461 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 gtttttcgca actgtctgcc tagaaatcct gtgatagaaa tcccgcgaac tccgctctcc 61 tccgccaaac acaaaagttc aaccgaaatc acctaccgca ccatcaggcg aaaacgaaca 121 taaactaccg accattgcag ggtcaggatg cgccgtttga atgattgacc gtctacagat 181 tcgtcgcttg ggtgcagctg ctagaaataa acgcgcagga ggcggaggag tagcaggagc 241 aggaggagga ggagcaggag gaggaggagg agcaggtgga ggaggagcag ggggatcggt 301 tccgggagcg gcaactggag cggctgctac cccagtcagt caccattcgc atccgtactc 361 cacgagcggc atcaacacgc cggcgacggc cagcacgagt tcctccagcg gcaacagctt 421 gacgccgcaa cagcagcagc agcagcagca ccaccacggg caccacttca atcagcacca 481 ccaccatcca ccgccgcact cccatcacca tccgcattcg acccactctc atccgattca 541 ctcacatccg cacacgcatc cgcacgcaca tccgcatccc cacctgcgcc actcgcagcc 601 agcgtccgcc agccaattca gcttcaatcc ctcgccgggc agcagtcctg gcaacggact 661 gggtctgggc gctcgccagg atgcggccag tgcgctcaat agccccacga ccattgtgaa 721 ctccggcagc ggcagcggcg gcggcagcag cgtcgccttc gggatgcagc cgcagcagca 781 gcagcaatcc ctgcccggcg gaggaggtgg ttcctcgacc acggcagctc catcctcggg 841 cggccacaac aatggagccg gattgggatc agcaatcggc ggcggtggcg gcggaggtgg 901 tggcctcaat ctgcttggcg gactgggcgg catgggcgga atgggcggtg gagcggcggc 961 cgctggaatg ggcatctgtg gcgggattag cagcaccgtg ggcagtgccg ccatcaccgg 1021 agtaccgccc attggactgg gcatcgccac cggcatcggg aacaagatca tgctgggccg 1081 gaagcagagc ctcaagggcg gcgaaccctt cctcgcggac tacggacccg aggagtcgct 1141 caacgagagc gccgacatcg agtgggtgaa caagctgtgg gtgcgacgcc ttatgcggct 1201 gtgtgccctc gtctcgctga cctccgtgtc gctgaacacg cccaagacct tcgagcggta 1261 tccctcgctg cagttcatca ccttcgcctc ggacacggcg gtcacgctgc tcttcaccgc 1321 cgagatgatc gccaagatgc acatccgcgg agtgctgcat ggtgaggtgc cttatctcaa 1381 agatcactgg tgccagtttg atgcttctat ggtcagcttc ctgtggatct cgatcattct 1441 gcagatcttc gaggtgctcg agatagttcc caagttctcc tatttgtcca ttatgagagc 1501 tcctcgacca ttgatcatga ttcgcttcct acgcgtcttc cttaaattta gtatgccaaa 1561 aagtcggatc aaccagatct tcaaacgttc gagccagcaa atctacaatg ttactttgtt 1621 cttcctcttc ttcatgtccc tgtacggatt gcttggggtt cagttctttg gggagctgaa 1681 aaatcactgc gtgatgaaca atacttcata cgatgagaag aatagacctg tgctgaccat 1741 caactcgctg gccattccgg acaccttctg ctcaatggac cccgactcgg gctaccagtg 1801 ctccccgggg atggtctgca tgaagatgga cttcctcagc agctatgtga tcggcttcaa 1861 tgggttcgag gacatcgcga cgagcatctt cacggtctac caggcggcct cgcaggaggg 1921 ctgggtgttc atcatgtacc gggccatcga ttcgctgccc gcgtggcgag cggccttcta 1981 cttcagcacg atgatcttct tcctggcgtg gctggtgaag aacgtcttca tagccgtgat 2041 cacggagacc ttcaacgaga tacgcgtcca gttccagcag atgtggggtg ccagggggca 2101 tattcagaag accgccgcct cgcagattct cagcggcaac gattccggct ggcgactggt 2161 gacgatcgat gataataagc acgggggatt ggcgcccgag acctgtcatg ctatcctgcg 2221 atcaccctac ttccggatgc tggtgatgag cgtcatcctg gccaatggca ttgtgaccgc 2281 cacgatgact tttaagcatg acgggaggcc aagggatgtg ttctacgagc ggtactacta 2341 catcgagctg gtgttcacct gcctgctcga cctggagacg ctcttcaaga tctattgtct 2401 gggctggcgg ggctactaca agcactcaat acataaattc gaactgctgc tggccgctgg 2461 aactacgctg catatagtgc cgatgttcta tccttcggga ttgacctact tccaggtgct 2521 gcgtgtggtg agactcatca aggcttcgcc gatgctggag ggattcgttt acaagatctt 2581 cggaccaggg aagaaactgg gatcactgat catcttcacc atgtgcctgc tgatcatcag 2641 ctcgagcatc tcgatgcagc tgttctgctt cctgtgcgac ttcaccaagt tcgagtcctt 2701 cccggaggcc ttcatgagca tgttccagat cctcacgcag gaagcgtggg tggaggttat 2761 ggacgagacg atgatcagga ccagcaagac cctaacgccc ctggtggctg tctattttat 2821 actctaccat ctgttcgtca ccctcatcgt gctcagtctg ttcgtggcgg tgattctcga 2881 taatttggag ctggacgagg acattaagaa gctgaagcag ctcaagttcc gcgagcagag 2941 tgccgagatc aaggagacgc tgcccttccg gctgcgcatc ttcgagaagt tccccgactc 3001 gccgcagatg accatcctgc atcgcatccc caacgacttt atgctgccca aggtccgcga 3061 gagcttcatg aagcactttg tcatcgagct ggagacggag gactcgctgg tggagaactg 3121 caagcgcccc atgtccgagt gctgggagtc caacgtcgtt ttccgcaagc agaagcccgt 3181 gcggatcatg aacaagacgg ccaaggtccg ggcagccggc agtagtctgc gcaaattggc 3241 cattacgcac atcatcaatg acagcaacaa ccagcgcctg atgctcggcg actccgcgat 3301 gctgccggtg gtcgggacaa agggcggcgg cggcctcaag tcgcagggca ccatcaccca 3361 ctcgaagccg tggcgcgtcg accaaaagaa cgtgcgctcc ggttccatca agctgaagca 3421 gacctacgag catctgatgg agaacggcga tatagcagcg gccccgcggg caaattccgg 3481 aagggcgaga ccccacgatc tggacattaa gctgctgcag gcgaagcgcc agcaggctga 3541 gatgcgacgc aaccaaaggg aggaggatct gcgcgagaat cacccgttct tcgacacgcc 3601 gctctttctg gtgccgcgcg agagtcgctt ccggaagatt tgccagaaga tcgtccacgc 3661 gcgctacgat gcccggctca aggacccgct gaccggcaag gagcgcaagg tccagtacaa 3721 gagcctgcac aactttctcg ggctggtcac ctatctcgac tgggtgatga tattcgccac 3781 cacgctctcg tgcatctcga tgatgttcga gacacccaat taccgggtga tggatcatcc 3841 gacgctgcag atcgccgagt acgggttcgt tattttcatg agcctagagc tggcgctgaa 3901 gatcctggcc gacggcctgt tcttcacgcc gaaggcttac atcaaggacg tggccgccgc 3961 cctggatgtc ttcatctatg tggtgtccac ctcgttcttg tgctggatgc ccctgaatat 4021 accaaccaac tcggcggccc agctcctgat gatcctgcgc tgcgtgcgtc cgctgcgaat 4081 cttcaccctg gtgccgcaca tgcgaaaggt cgtctacgaa ctgtgccgtg gcttcaagga 4141 gatcctgctc gtatccacgc tgctcatcct cctcatgttc atcttcgcca gctacggcgt 4201 ccagctgtac ggcggtcgtc tggcccgctg caatgacccc acgatttcgc ggcgtgagga 4261 ttgcgtcggt gtctttatgc gacgcgtctt tgtcaccaaa atgaagctga ccccgggccc 4321 cgatgagtcc tacccggcga tgctggtgcc cagggtgtgg gccaatccgc ggcgattcaa 4381 cttcgataat atcggcgatg ccatgctgac gctcttcgag gtgctgtcct tcaagggctg 4441 gctggatgtg cgcgatgtcc tgatcaaggc cgtgggtccg gtacacgccg tctatatcca 4501 catctacata ttcttgggct gcatgatcgg cctgacgttg ttcgtgggcg tggtcattgc 4561 gaattattcg gagaacaagg gcaccgccct gctgaccgtc gaccagaggc gctggtgtga 4621 cctgaagaag cgtctgaaga tcgcccagcc gctccatttg ccaccgcgac ccgatggccg 4681 aaaaatccgg gccttcacct acgacatcac ccagcacatt atctttaagc gggtcatcgc 4741 ggtggtggtg ctgatcaaca gtatgctgct ctccatcacg tggatcaagg gagaggtgca 4801 tacggaacgc ctggtgatcg tcagtgcggt tttgaccttt gtctttgtgg ttgaggtggt 4861 gatgaagaac attgccttta caccgcgcgg ctattggcaa tctaggcgca atcgctatga 4921 cctactcgtc acagttgccg gtgtgatttg gattatattg cagaccattc tgcggaacga 4981 tctgtcctac ttcttcggct tcatggtggt catcctgcgc ttcttcacca tcaccggcaa 5041 gcacaccaca ctgaagatgc tcatgttgac cgtgggcgtg tctgtatgca agtccttctt 5101 cattatcttt ggcatgtttc tgctagtctt cttctatgcg ctggccggga cgattctgtt 5161 cggaacggtc aaatacggcg agggcatcgg tcgcagggcc aatttcggtt cacccgtcac 5221 cggggtggcg atgcttttcc ggatcgtcac cggcgaggat tggaacaaga tcatgcacga 5281 ctgcatggtc cagccgccgt actgcaccct cggcaacaac tactgggaga cggactgcgg 5341 caactttacc gccagcctga tatacttctg caccttctac gtgatcatca catacatagt 5401 gctcaacttg cttgtggcta ttatcatgga gaacttttcc ctcttctact caaatgaaga 5461 ggacgccctg ctctcgtatg cggatatacg caatttccaa aacacctgga acattgtgga 5521 catccatcag cgaggagtga ttcccgtgcg acgggtgaag ttcatattgc gcctgctcaa 5581 aggacgactc gagtgcgatc cgcaaaagga tcgtctgcta ttcaagtaca tgtgctatga 5641 gctggacaag ctgcacaacg gcgaggatgt gaccttccat gatgtcatca acatgctgag 5701 ctatcgctcg gtggacattc gaaaggccct gcagctggag gagctgttgg cgcgcgagga 5761 gttcgagtac ctggtcgagg aggaggtggc caagatgacc attcgcacct ggctggaggg 5821 gtgccttaag aagatacggg cccaaaatgc cagcaagcag cagaactcgc tgattgccgg 5881 cctgcgggcc accaacgagc agcccgtgat gcgtccgaat gtccaggagg acaaggctcc 5941 gctgggcggg gcggcggaca agtcggcgat cagcacgatc agtggggcgg tggccggcgc 6001 ctgtccgctg cccaccagcg atgccttctc gccgaccttc agttcgacgg agaacgagga 6061 gaaggacggc agcagcagtg cagcggtcca ggtggtgcag gataccccgt cttccggagc 6121 aattggaacg ggaaccagtt cagtggtggc catgggacct ccaccttcgg ttcaaacccc 6181 cgccgcccgt cacgtgatga cggtgggcaa gcggggttat gccctcaatc gttccgattc 6241 gacgggcagt tcggcgggtc ggaaatttct ggcccccacc tccagtgatc cgcagcagcg 6301 ttcgacgctg agcgacaagg agcggctgca tatcagcagt cagcagagga agaagaactc 6361 gatgaccacc ctgccacatg ccggccaatt ggggcagttg gccaagcagc ggggcggcgg 6421 aggaggagag gccagcaaat cgtccagttt ctttgcccaa ctgaacagcg aaatgggcca 6481 gcagttccat tatccgacaa taagtgcagg tgtccatggc tatgggcatg gacatggtca 6541 gcatggtcat catcagcagg gaggaggagg aggtggagcc ttgggaagtc cctcggccat 6601 gatgagccaa atgatcgggg gcagtggcaa gttgctgccg ttcaataacc aggcaaatgc 6661 cgtctacgag gtccacgact ggtggcagga gcaggtcctt tgtccacaga ccagcgatga 6721 cgagatctag cagtggccaa ggaaatccag gaaccccagg atacccaaga aaaagaaccc 6781 acgcaaattc cgccgaggag gtggagctgg agcctattaa gcatcattat caacaacaac 6841 tagtggccta gaaacttttt tgtatatgcc taataagtat tgtaaatgta tcggcctcac 6901 acaattaacg gttaacaatt cttaaaacga gtatatatat atatatagat atatagcgat 6961 agtttagcac taaaaaaatg attagtttta cgttccgttg ttgttgtttg cgtgctagat 7021 atcagtcatt gggtaacttt gttatagctt aaatatataa aaggaaatat atattatata 7081 tatgtataat gagtacatta cgtatagtgc aaatttataa gcgcgctgcc tcaccaaacg 7141 acgagcattc gagattcgta acttgcccaa aaaaaataaa aacaagcgat taagtagcta 7201 aaaatcacat tctaccgatt cgaactagcc aaaagtttat accaactagt agatgtagaa 7261 gaataaaaat aaaaataaaa atagaaaggt caagaaagag acagcagaca ccaaatagaa 7321 agagatgcct attaagatat tttgagatta gccaaaaagc agagaagtca gcacaaatta 7381 atattaaagt tattactacg agtacatagc tatagccaaa cgaagcccca ttcaatgcga 7441 cctcccttcc ctttcgatga gaagcgtaat aaaaatcgtt gaaattgcag aacgttttaa