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LOCUS XM_017139735 7527 bp mRNA linear INV 09-DEC-2024 protein na (na), transcript variant X1, mRNA. ACCESSION XM_017139735 VERSION XM_017139735.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139735.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7527 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7527 /gene="na" /note="sodium leak channel non-selective protein na; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056083" CDS 161..6757 /gene="na" /codon_start=1 /product="sodium leak channel NALCN isoform X1" /protein_id="XP_016995224.2" /db_xref="GeneID:108056083" /translation="MIDRLQIRRLGAAARNKRAGGGGVAGAGGGGAGGGGGAGGGGAG GSVPGAATGAAATPVSHHSHPYSTSGINTPATASTSSSSGNSLTPQQQQQQQHHHGHH FNQHHHHPPPHSHHHPHSTHSHPIHSHPHTHPHAHPHPHLRHSQPASASQFSFNPSPG SSPGNGLGLGARQDAASALNSPTTIVNSGSGSGGGSSVAFGMQPQQQQQSLPGGGGGS STTAAPSSGGHNNGAGLGSAIGGGGGGGGGLNLLGGLGGMGGMGGGAAAAGMGICGGI SSTVGSAAITGVPPIGLGIATGIGNKIMLGRKQSLKGGEPFLADYGPEESLNESADIE WVNKLWVRRLMRLCALVSLTSVSLNTPKTFERYPSLQFITFASDTAVTLLFTAEMIAK MHIRGVLHGEVPYLKDHWCQFDASMVSFLWISIILQIFEVLEIVPKFSYLSIMRAPRP LIMIRFLRVFLKFSMPKSRINQIFKRSSQQIYNVTLFFLFFMSLYGLLGVQFFGELKN HCVMNNTSYDEKNRPVLTINSLAIPDTFCSMDPDSGYQCSPGMVCMKMDFLSSYVIGF NGFEDIATSIFTVYQAASQEGWVFIMYRAIDSLPAWRAAFYFSTMIFFLAWLVKNVFI AVITETFNEIRVQFQQMWGARGHIQKTAASQILSGNDSGWRLVTIDDNKHGGLAPETC HAILRSPYFRMLVMSVILANGIVTATMTFKHDGRPRDVFYERYYYIELVFTCLLDLET LFKIYCLGWRGYYKHSIHKFELLLAAGTTLHIVPMFYPSGLTYFQVLRVVRLIKASPM LEGFVYKIFGPGKKLGSLIIFTMCLLIISSSISMQLFCFLCDFTKFESFPEAFMSMFQ ILTQEAWVEVMDETMIRTSKTLTPLVAVYFILYHLFVTLIVLSLFVAVILDNLELDED IKKLKQLKFREQSAEIKETLPFRLRIFEKFPDSPQMTILHRIPNDFMLPKVRESFMKH FVIELETEDSLVENCKRPMSECWESNVVFRKQKPVRIMNKTAKVRAAGSSLRKLAITH IINDSNNQRLMLGDSAMLPVVGTKGGGGLKSQGTITHSKPWRVDQKKFGSRSIRRSVR SGSIKLKQTYEHLMENGDIAAAPRANSGRARPHDLDIKLLQAKRQQAEMRRNQREEDL RENHPFFDTPLFLVPRESRFRKICQKIVHARYDARLKDPLTGKERKVQYKSLHNFLGL VTYLDWVMIFATTLSCISMMFETPNYRVMDHPTLQIAEYGFVIFMSLELALKILADGL FFTPKAYIKDVAAALDVFIYVVSTSFLCWMPLNIPTNSAAQLLMILRCVRPLRIFTLV PHMRKVVYELCRGFKEILLVSTLLILLMFIFASYGVQLYGGRLARCNDPTISRREDCV GVFMRRVFVTKMKLTPGPDESYPAMLVPRVWANPRRFNFDNIGDAMLTLFEVLSFKGW LDVRDVLIKAVGPVHAVYIHIYIFLGCMIGLTLFVGVVIANYSENKGTALLTVDQRRW CDLKKRLKIAQPLHLPPRPDGRKIRAFTYDITQHIIFKRVIAVVVLINSMLLSITWIK GEVHTERLVIVSAVLTFVFVVEVVMKNIAFTPRGYWQSRRNRYDLLVTVAGVIWIILQ TILRNDLSYFFGFMVVILRFFTITGKHTTLKMLMLTVGVSVCKSFFIIFGMFLLVFFY ALAGTILFGTVKYGEGIGRRANFGSPVTGVAMLFRIVTGEDWNKIMHDCMVQPPYCTL GNNYWETDCGNFTASLIYFCTFYVIITYIVLNLLVAIIMENFSLFYSNEEDALLSYAD IRNFQNTWNIVDIHQRGVIPVRRVKFILRLLKGRLECDPQKDRLLFKYMCYELDKLHN GEDVTFHDVINMLSYRSVDIRKALQLEELLAREEFEYLVEEEVAKMTIRTWLEGCLKK IRAQNASKQQNSLIAGLRATNEQPVMRPNVQEDKAPLGGAADKSAISTISGAVAGACP LPTSDAFSPTFSSTENEEKDGSSSAAVQVVQDTPSSGAIGTGTSSVVAMGPPPSVQTP AARHVMTVGKRGYALNRSDSTGSSAGRKFLAPTSSDPQQRSTLSDKERLHISSQQRKK NSMTTLPHAGQLGQLAKQRGGGGGEASKSSSFFAQLNSEMGQQFHYPTISAGVHGYGH GHGQHGHHQQGGGGGGALGSPSAMMSQMIGGSGKLLPFNNQANAVYEVHDWWQEQVLC PQTSDDEI" misc_feature 1190..2071 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2222..2890 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3779..4600 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 4742..5488 /gene="na" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" ORIGIN 1 gtttttcgca actgtctgcc tagaaatcct gtgatagaaa tcccgcgaac tccgctctcc 61 tccgccaaac acaaaagttc aaccgaaatc acctaccgca ccatcaggcg aaaacgaaca 121 taaactaccg accattgcag ggtcaggatg cgccgtttga atgattgacc gtctacagat 181 tcgtcgcttg ggtgcagctg ctagaaataa acgcgcagga ggcggaggag tagcaggagc 241 aggaggagga ggagcaggag gaggaggagg agcaggtgga ggaggagcag ggggatcggt 301 tccgggagcg gcaactggag cggctgctac cccagtcagt caccattcgc atccgtactc 361 cacgagcggc atcaacacgc cggcgacggc cagcacgagt tcctccagcg gcaacagctt 421 gacgccgcaa cagcagcagc agcagcagca ccaccacggg caccacttca atcagcacca 481 ccaccatcca ccgccgcact cccatcacca tccgcattcg acccactctc atccgattca 541 ctcacatccg cacacgcatc cgcacgcaca tccgcatccc cacctgcgcc actcgcagcc 601 agcgtccgcc agccaattca gcttcaatcc ctcgccgggc agcagtcctg gcaacggact 661 gggtctgggc gctcgccagg atgcggccag tgcgctcaat agccccacga ccattgtgaa 721 ctccggcagc ggcagcggcg gcggcagcag cgtcgccttc gggatgcagc cgcagcagca 781 gcagcaatcc ctgcccggcg gaggaggtgg ttcctcgacc acggcagctc catcctcggg 841 cggccacaac aatggagccg gattgggatc agcaatcggc ggcggtggcg gcggaggtgg 901 tggcctcaat ctgcttggcg gactgggcgg catgggcgga atgggcggtg gagcggcggc 961 cgctggaatg ggcatctgtg gcgggattag cagcaccgtg ggcagtgccg ccatcaccgg 1021 agtaccgccc attggactgg gcatcgccac cggcatcggg aacaagatca tgctgggccg 1081 gaagcagagc ctcaagggcg gcgaaccctt cctcgcggac tacggacccg aggagtcgct 1141 caacgagagc gccgacatcg agtgggtgaa caagctgtgg gtgcgacgcc ttatgcggct 1201 gtgtgccctc gtctcgctga cctccgtgtc gctgaacacg cccaagacct tcgagcggta 1261 tccctcgctg cagttcatca ccttcgcctc ggacacggcg gtcacgctgc tcttcaccgc 1321 cgagatgatc gccaagatgc acatccgcgg agtgctgcat ggtgaggtgc cttatctcaa 1381 agatcactgg tgccagtttg atgcttctat ggtcagcttc ctgtggatct cgatcattct 1441 gcagatcttc gaggtgctcg agatagttcc caagttctcc tatttgtcca ttatgagagc 1501 tcctcgacca ttgatcatga ttcgcttcct acgcgtcttc cttaaattta gtatgccaaa 1561 aagtcggatc aaccagatct tcaaacgttc gagccagcaa atctacaatg ttactttgtt 1621 cttcctcttc ttcatgtccc tgtacggatt gcttggggtt cagttctttg gggagctgaa 1681 aaatcactgc gtgatgaaca atacttcata cgatgagaag aatagacctg tgctgaccat 1741 caactcgctg gccattccgg acaccttctg ctcaatggac cccgactcgg gctaccagtg 1801 ctccccgggg atggtctgca tgaagatgga cttcctcagc agctatgtga tcggcttcaa 1861 tgggttcgag gacatcgcga cgagcatctt cacggtctac caggcggcct cgcaggaggg 1921 ctgggtgttc atcatgtacc gggccatcga ttcgctgccc gcgtggcgag cggccttcta 1981 cttcagcacg atgatcttct tcctggcgtg gctggtgaag aacgtcttca tagccgtgat 2041 cacggagacc ttcaacgaga tacgcgtcca gttccagcag atgtggggtg ccagggggca 2101 tattcagaag accgccgcct cgcagattct cagcggcaac gattccggct ggcgactggt 2161 gacgatcgat gataataagc acgggggatt ggcgcccgag acctgtcatg ctatcctgcg 2221 atcaccctac ttccggatgc tggtgatgag cgtcatcctg gccaatggca ttgtgaccgc 2281 cacgatgact tttaagcatg acgggaggcc aagggatgtg ttctacgagc ggtactacta 2341 catcgagctg gtgttcacct gcctgctcga cctggagacg ctcttcaaga tctattgtct 2401 gggctggcgg ggctactaca agcactcaat acataaattc gaactgctgc tggccgctgg 2461 aactacgctg catatagtgc cgatgttcta tccttcggga ttgacctact tccaggtgct 2521 gcgtgtggtg agactcatca aggcttcgcc gatgctggag ggattcgttt acaagatctt 2581 cggaccaggg aagaaactgg gatcactgat catcttcacc atgtgcctgc tgatcatcag 2641 ctcgagcatc tcgatgcagc tgttctgctt cctgtgcgac ttcaccaagt tcgagtcctt 2701 cccggaggcc ttcatgagca tgttccagat cctcacgcag gaagcgtggg tggaggttat 2761 ggacgagacg atgatcagga ccagcaagac cctaacgccc ctggtggctg tctattttat 2821 actctaccat ctgttcgtca ccctcatcgt gctcagtctg ttcgtggcgg tgattctcga 2881 taatttggag ctggacgagg acattaagaa gctgaagcag ctcaagttcc gcgagcagag 2941 tgccgagatc aaggagacgc tgcccttccg gctgcgcatc ttcgagaagt tccccgactc 3001 gccgcagatg accatcctgc atcgcatccc caacgacttt atgctgccca aggtccgcga 3061 gagcttcatg aagcactttg tcatcgagct ggagacggag gactcgctgg tggagaactg 3121 caagcgcccc atgtccgagt gctgggagtc caacgtcgtt ttccgcaagc agaagcccgt 3181 gcggatcatg aacaagacgg ccaaggtccg ggcagccggc agtagtctgc gcaaattggc 3241 cattacgcac atcatcaatg acagcaacaa ccagcgcctg atgctcggcg actccgcgat 3301 gctgccggtg gtcgggacaa agggcggcgg cggcctcaag tcgcagggca ccatcaccca 3361 ctcgaagccg tggcgcgtcg accaaaagaa gtttggctcc cgctccatcc gtcgcagcgt 3421 gcgctccggt tccatcaagc tgaagcagac ctacgagcat ctgatggaga acggcgatat 3481 agcagcggcc ccgcgggcaa attccggaag ggcgagaccc cacgatctgg acattaagct 3541 gctgcaggcg aagcgccagc aggctgagat gcgacgcaac caaagggagg aggatctgcg 3601 cgagaatcac ccgttcttcg acacgccgct ctttctggtg ccgcgcgaga gtcgcttccg 3661 gaagatttgc cagaagatcg tccacgcgcg ctacgatgcc cggctcaagg acccgctgac 3721 cggcaaggag cgcaaggtcc agtacaagag cctgcacaac tttctcgggc tggtcaccta 3781 tctcgactgg gtgatgatat tcgccaccac gctctcgtgc atctcgatga tgttcgagac 3841 acccaattac cgggtgatgg atcatccgac gctgcagatc gccgagtacg ggttcgttat 3901 tttcatgagc ctagagctgg cgctgaagat cctggccgac ggcctgttct tcacgccgaa 3961 ggcttacatc aaggacgtgg ccgccgccct ggatgtcttc atctatgtgg tgtccacctc 4021 gttcttgtgc tggatgcccc tgaatatacc aaccaactcg gcggcccagc tcctgatgat 4081 cctgcgctgc gtgcgtccgc tgcgaatctt caccctggtg ccgcacatgc gaaaggtcgt 4141 ctacgaactg tgccgtggct tcaaggagat cctgctcgta tccacgctgc tcatcctcct 4201 catgttcatc ttcgccagct acggcgtcca gctgtacggc ggtcgtctgg cccgctgcaa 4261 tgaccccacg atttcgcggc gtgaggattg cgtcggtgtc tttatgcgac gcgtctttgt 4321 caccaaaatg aagctgaccc cgggccccga tgagtcctac ccggcgatgc tggtgcccag 4381 ggtgtgggcc aatccgcggc gattcaactt cgataatatc ggcgatgcca tgctgacgct 4441 cttcgaggtg ctgtccttca agggctggct ggatgtgcgc gatgtcctga tcaaggccgt 4501 gggtccggta cacgccgtct atatccacat ctacatattc ttgggctgca tgatcggcct 4561 gacgttgttc gtgggcgtgg tcattgcgaa ttattcggag aacaagggca ccgccctgct 4621 gaccgtcgac cagaggcgct ggtgtgacct gaagaagcgt ctgaagatcg cccagccgct 4681 ccatttgcca ccgcgacccg atggccgaaa aatccgggcc ttcacctacg acatcaccca 4741 gcacattatc tttaagcggg tcatcgcggt ggtggtgctg atcaacagta tgctgctctc 4801 catcacgtgg atcaagggag aggtgcatac ggaacgcctg gtgatcgtca gtgcggtttt 4861 gacctttgtc tttgtggttg aggtggtgat gaagaacatt gcctttacac cgcgcggcta 4921 ttggcaatct aggcgcaatc gctatgacct actcgtcaca gttgccggtg tgatttggat 4981 tatattgcag accattctgc ggaacgatct gtcctacttc ttcggcttca tggtggtcat 5041 cctgcgcttc ttcaccatca ccggcaagca caccacactg aagatgctca tgttgaccgt 5101 gggcgtgtct gtatgcaagt ccttcttcat tatctttggc atgtttctgc tagtcttctt 5161 ctatgcgctg gccgggacga ttctgttcgg aacggtcaaa tacggcgagg gcatcggtcg 5221 cagggccaat ttcggttcac ccgtcaccgg ggtggcgatg cttttccgga tcgtcaccgg 5281 cgaggattgg aacaagatca tgcacgactg catggtccag ccgccgtact gcaccctcgg 5341 caacaactac tgggagacgg actgcggcaa ctttaccgcc agcctgatat acttctgcac 5401 cttctacgtg atcatcacat acatagtgct caacttgctt gtggctatta tcatggagaa 5461 cttttccctc ttctactcaa atgaagagga cgccctgctc tcgtatgcgg atatacgcaa 5521 tttccaaaac acctggaaca ttgtggacat ccatcagcga ggagtgattc ccgtgcgacg 5581 ggtgaagttc atattgcgcc tgctcaaagg acgactcgag tgcgatccgc aaaaggatcg 5641 tctgctattc aagtacatgt gctatgagct ggacaagctg cacaacggcg aggatgtgac 5701 cttccatgat gtcatcaaca tgctgagcta tcgctcggtg gacattcgaa aggccctgca 5761 gctggaggag ctgttggcgc gcgaggagtt cgagtacctg gtcgaggagg aggtggccaa 5821 gatgaccatt cgcacctggc tggaggggtg ccttaagaag atacgggccc aaaatgccag 5881 caagcagcag aactcgctga ttgccggcct gcgggccacc aacgagcagc ccgtgatgcg 5941 tccgaatgtc caggaggaca aggctccgct gggcggggcg gcggacaagt cggcgatcag 6001 cacgatcagt ggggcggtgg ccggcgcctg tccgctgccc accagcgatg ccttctcgcc 6061 gaccttcagt tcgacggaga acgaggagaa ggacggcagc agcagtgcag cggtccaggt 6121 ggtgcaggat accccgtctt ccggagcaat tggaacggga accagttcag tggtggccat 6181 gggacctcca ccttcggttc aaacccccgc cgcccgtcac gtgatgacgg tgggcaagcg 6241 gggttatgcc ctcaatcgtt ccgattcgac gggcagttcg gcgggtcgga aatttctggc 6301 ccccacctcc agtgatccgc agcagcgttc gacgctgagc gacaaggagc ggctgcatat 6361 cagcagtcag cagaggaaga agaactcgat gaccaccctg ccacatgccg gccaattggg 6421 gcagttggcc aagcagcggg gcggcggagg aggagaggcc agcaaatcgt ccagtttctt 6481 tgcccaactg aacagcgaaa tgggccagca gttccattat ccgacaataa gtgcaggtgt 6541 ccatggctat gggcatggac atggtcagca tggtcatcat cagcagggag gaggaggagg 6601 tggagccttg ggaagtccct cggccatgat gagccaaatg atcgggggca gtggcaagtt 6661 gctgccgttc aataaccagg caaatgccgt ctacgaggtc cacgactggt ggcaggagca 6721 ggtcctttgt ccacagacca gcgatgacga gatctagcag tggccaagga aatccaggaa 6781 ccccaggata cccaagaaaa agaacccacg caaattccgc cgaggaggtg gagctggagc 6841 ctattaagca tcattatcaa caacaactag tggcctagaa acttttttgt atatgcctaa 6901 taagtattgt aaatgtatcg gcctcacaca attaacggtt aacaattctt aaaacgagta 6961 tatatatata tatagatata tagcgatagt ttagcactaa aaaaatgatt agttttacgt 7021 tccgttgttg ttgtttgcgt gctagatatc agtcattggg taactttgtt atagcttaaa 7081 tatataaaag gaaatatata ttatatatat gtataatgag tacattacgt atagtgcaaa 7141 tttataagcg cgctgcctca ccaaacgacg agcattcgag attcgtaact tgcccaaaaa 7201 aaataaaaac aagcgattaa gtagctaaaa atcacattct accgattcga actagccaaa 7261 agtttatacc aactagtaga tgtagaagaa taaaaataaa aataaaaata gaaaggtcaa 7321 gaaagagaca gcagacacca aatagaaaga gatgcctatt aagatatttt gagattagcc 7381 aaaaagcaga gaagtcagca caaattaata ttaaagttat tactacgagt acatagctat 7441 agccaaacga agccccattc aatgcgacct cccttccctt tcgatgagaa gcgtaataaa 7501 aatcgttgaa attgcagaac gttttaa