Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017139720 7758 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017139720 VERSION XM_017139720.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139720.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7758 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7758 /gene="rut" /note="adenylate cyclase rutabaga; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:108056078" CDS 541..7026 /gene="rut" /codon_start=1 /product="Ca(2+)/calmodulin-responsive adenylate cyclase isoform X1" /protein_id="XP_016995209.2" /db_xref="GeneID:108056078" /translation="MDHAVKATRGRPLNTLRFENDELECLYQRYTLKLQRFSVLGVVA LVFVLCGVMAALSLAFNNAATFHNIFNAIVCGLFAVVLILLQCSVIKDHHLPTLCYGI LLFTASICVVSMPTLGSVFPVDTKEVMAEGVWQIVFVVFLAYAMMPLQIWEAVAFGIA LPSVHISLTVYKIFTDALRYLEYNQLIANIVIFIGVNVAGLVVNIMMERAQRRTFLDT RNCIASRLEIQDENEKLERLLLSVLPQHVAMQMKNDILSPVAGQFHRIYIQKHENVSI LFADIVGFTVLSSQCSAQELVRLLNELFGRFDQLAHDNHCLRIKILGDCYYCVSGLPE PRKDHAKCAVEMGLDMIDAIATVVEATDVILNMRVGIHTGRVLCGVLGLRKWQFDVWS NDVTLANHMESGGEPGRVHVTRATLDSLSGEYEVEAGHGDERSSYLRDHGVDTFFIVP PPHRRKPLMLNTLGVRSAIGSRRKLSFRNVSNVVMQLLHTIKFSEPVPFSNIATGSFP SAASALGGGGVALGGGGGGAARGSTCEASAGSVQVSEKGSRKVIRLQKILHATPPPHG IGYGSVVGSGGGGDSSGISGSGSGCGSGSNSGSGGGIAAGIGGSVQVTVGTNPNSTAS TISRIHRHNHKNNKSQSKVADKFKRPFRKRHSVAAHHQPTNRVNRFLSQAINARSVDC DKSEHVDRLTLRFRQSDMEREYHKDFDLGFTTAMGCSLLLLILGAALQVTALPRTLIL LLLFLFAFIWVSAILMLLLAVRLKWIIWDISESFSLRMAITIFTVILIYSVGQVNVFT CVSDHPCSGNATSSFPNDSHRKCSLPQYVSLSAAFAFLSVSVFLRLPIIFKSLLVLGM GTIYGLFIELSHQNIFECYDNRVNASIPLHLISLARIGIFMIAILVHGRLVEGTARLD FLWQLQASQEKKEMDVLQESNKRILHNLLPAHVAAHFLDAQFRNNMELYHQSYAKVGV IFASVPNFNEFYTEMDGSDQGLECLRLLNEIIADFDELLKEDRFRGIDKIKTVGSTYM AVVGLIPEYKIQPNDPNSVRRHMTALIEYVKAMRHSLQEINSHSYNNFMLRVGINIGP VVAGVIGARKPQYDIWGNTVNVASRMDSTGVPGYSQVTQEVVDSLVGSHFEFRCRGTI KVKGKGDMVTYFLCDSGNKSLNGEVRNAMSLPQSLHAPDYYMKVAQFPENRVNSDTYS KKREENGGNFTVGGEEQQLLLQHQHKQLEPPLPLPAPPPPHHHLHQQQQQRLNSKLQK QPIFMANGGLPNIRENGNGHNGHNGEQQQPAAVAVPLQQPPTQQLQQLQQLQHHQIQF QHTPVPVQHQILLHHQHQLQLQHHNQPVPVPSVMLREFNIIENPTSGGRHPQMEQLPP SHHGSLDQSGLGMGMGMLGGGGDCFMMPRRVPALNQHGHHPTHHLHSNLNMNMNQHPP SFTSLGYGQCRESEPLLHASSIAPVAKIMPMQHAPKYEPPRYTSPHTMLSHQQLPPHP ALQEHQQQQQELPQRQQQQQYAMYSQQPQLPPKPAPLRTYMKPLPKLPAAELEESRDM SSTDDLSSRPHSPSMSSSDESYSKTTEGEGENDEDSRPRIPNGAVHHHHHHRNGYNNG GGLVNPLQWLYPCDIQVDPTSPVVDLHDFELSSTTESQQPKGDSCNSFDYQKATAAGG IATKSPFERELQRLLNESSRGRGLATTATATATATTTTTDHTASNGSRNEMMMSYSFS NGKLSGAGGSGSAVGNGSGSSNGNLSGGSGSNSNSGNNNSGGHKADLQQQDPQELKLP GSSSFMIAKHPVGLEAIKEITRNKNPSESSQMQTSDTESCEILHETRNQMHMLAMLEM QTAKEQQQLRTHRQRPRSKELQYSHESLDGLDGAAMQPRQPRFHHHHHHHHHHHQQQQ QRYNHVQEQEERDDTEDNLADEEFEDDEVGRDVRQKRLQKPDKTSHKRGEQEQDADDD DDDDEVDDVDQEDDEEQEQEHRNGGQLPLTNGSSNVINDELKYGAAHLNHQSMDSNPL ESQSEWSDDDCREEATGGAESTGYITDEPGLENISLLNEAGLTDAEGALSDVNSLYNA PDVDDTSVSSRASSRLLSLDSLSGLYDCDLDSKHELAIVNASHKISSKFGQPTSPAQQ QQQQLQHQHQQQTQPQIQVQFQSAEELRE" misc_feature <589..1305 /gene="rut" /note="Adenylyl cyclase N-terminal extracellular and transmembrane region; Region: AC_N; pfam16214" /db_xref="CDD:318454" misc_feature 1336..1824 /gene="rut" /note="Adenylate and Guanylate cyclase catalytic domain; Region: Guanylate_cyc; pfam00211" /db_xref="CDD:425528" misc_feature order(1372..1374,1378..1395,1498..1500,1504..1512, 1519..1521,1705..1713,1723..1728,1735..1740) /gene="rut" /note="nucleotidyl binding site [active]" /db_xref="CDD:143636" misc_feature order(1378..1380,1510..1512) /gene="rut" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143636" misc_feature order(1393..1395,1429..1431,1438..1443,1450..1452, 1462..1464,1498..1503,1669..1671,1678..1680,1708..1719, 1726..1728) /gene="rut" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143636" misc_feature 2434..2658 /gene="rut" /note="Adenylate cyclase, conserved domain; Region: Adcy_cons_dom; pfam06327" /db_xref="CDD:461877" misc_feature 2788..4014 /gene="rut" /note="Adenylate cyclase, class 3 [Signal transduction mechanisms]; Region: AcyC; COG2114" /db_xref="CDD:441717" misc_feature 3424..4017 /gene="rut" /note="Adenylate and Guanylate cyclase catalytic domain; Region: Guanylate_cyc; pfam00211" /db_xref="CDD:425528" misc_feature order(3460..3462,3466..3483,3607..3609,3613..3621, 3628..3630,3844..3852,3862..3867,3874..3879,3985..3987) /gene="rut" /note="nucleotidyl binding site [active]" /db_xref="CDD:143636" misc_feature order(3466..3468,3619..3621) /gene="rut" /note="metal binding site [ion binding]; metal-binding site" /db_xref="CDD:143636" misc_feature order(3481..3483,3529..3531,3538..3543,3550..3552, 3562..3564,3607..3612,3808..3810,3817..3819,3847..3858, 3865..3867,3985..3987) /gene="rut" /note="dimer interface [polypeptide binding]; other site" /db_xref="CDD:143636" polyA_site 7758 /gene="rut" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcggttcgtt tcggttcgct tcgacttgaa cggacgcgcc gcggacgctg ctttgctgag 61 aagtgagaac tgagaacaga ccaggccaac aaacaccaaa ccgaatcgaa agccaaacaa 121 accaagccaa acaaacctcg ctagccgaag aaatcgcgtc ggaaagtcaa gttgttggtg 181 gaaagccgtt ggataacgcg acgattttaa attatttttt tttcggtgcg gtgccagtgt 241 tttttttgtt gtttgttggt ttttccacaa agtttgtttt cgtttttgtc gtggaaatgc 301 gcgcgcgcat ttaagaagca gtgaaacggg gaaaactaaa aaacgcagct gcctgcaaca 361 acaacaaaag caacaacaga tacaaaacaa ggaaccaaag aagatatcga aatcgaaatc 421 aacttgcaac ttgcaacaca atcgttgttg ctttttggcc cctgaacttg gcggccccaa 481 tcctcctttt ggcaggcgtc ggaaggagcc gctcggcagc ggcagctgcg gcggcaccgc 541 atggatcatg ccgtgaaggc gacgcgcggc cgcccgctca acacgctgcg cttcgagaac 601 gacgagctgg aatgcctcta ccagcgttac acactgaagc tgcagcgctt ctcggtgctg 661 ggcgtggtgg ccttggtctt cgtcctctgc ggcgtgatgg cggccctctc gctggccttc 721 aataatgcgg ccacgtttca caacatcttc aatgcgatcg tgtgcggcct gttcgcagtg 781 gtgctgatcc tcctgcaatg ctcggtgatc aaggaccacc acctgcccac cttgtgctac 841 ggaatactgc tgttcacggc cagcatctgt gtagtatcga tgccaacgct gggcagcgtt 901 ttccccgtcg acaccaagga ggtgatggcc gagggcgtct ggcagatcgt gttcgtcgtc 961 ttcctcgcct atgcgatgat gccgctgcaa atctgggagg cggtggcctt tggcatcgcc 1021 ctgccctcgg tgcacatctc cctgacggtc tacaagatat tcacggatgc gctgcgctat 1081 ctggagtaca accagctgat cgccaatatt gtcatcttca ttggcgtgaa tgtggccggt 1141 ctggtggtga acatcatgat ggagcgagcc cagcggcgaa catttctcga tacgcgcaac 1201 tgcatcgcat cgcggctgga gatccaggac gagaacgaga agctggagcg cctgttgcta 1261 tccgtactgc cgcagcacgt ggccatgcag atgaagaacg acatcctgtc gccggtggcc 1321 ggccagttcc atcgcatcta catccagaag cacgagaacg tcagcatcct gttcgcggac 1381 atcgtcggct tcaccgtgct ctcctcgcag tgcagcgccc aggagcttgt gcgtctgctc 1441 aacgagctct tcggccgctt cgatcagctg gcccatgaca accactgttt gcgaattaaa 1501 atcctcggcg actgctatta ttgtgtctcc ggattgccag aaccgcgaaa ggatcacgcc 1561 aaatgcgccg tggaaatggg actcgatatg atcgatgcca ttgccaccgt ggtggaggcc 1621 accgacgtca tcctgaacat gcgcgtgggc atccacacgg gccgtgtgct ctgcggggtc 1681 ctgggcctcc gcaagtggca gttcgatgtg tggtcgaatg acgtgaccct ggccaatcac 1741 atggagtcgg gcggtgagcc cggccgagtg cacgtgaccc gggccaccct ggactcgctg 1801 tccggtgaat acgaggtgga ggccgggcac ggagatgagc ggtcctcgta cctacgcgac 1861 cacggcgtgg acacgttctt cattgtgccg ccaccgcatc gtcgcaagcc cctgatgctc 1921 aacactttgg gcgttcgctc ggcgatcggc agtcgacgga agctctcgtt caggaacgtt 1981 tccaatgtgg tcatgcagct gctgcacacg atcaagttct ccgaaccggt gccgttctcc 2041 aatatagcca ccggatcctt tccctcggcg gccagcgcct tgggcggcgg aggagtggca 2101 ctcggcggag gaggaggagg tgcggcacgg ggaagcacct gcgaggcgag cgccggcagc 2161 gttcaggtgt ccgagaaggg atcgcgcaag gtgatacgtc tgcaaaagat cttgcatgca 2221 acaccgccac cgcacggcat tggctatggc agcgtcgtcg gcagcggcgg cggtggtgac 2281 agcagcggta tttccggttc cggttccggt tgcggttctg gttccaattc tggttccggt 2341 ggtggtattg ccgctggcat tgggggcagt gttcaagtga ccgtaggcac caatcccaac 2401 tctacagcga gtacgattag tcgcattcat aggcacaatc acaagaacaa taaatcgcag 2461 tccaaggtgg cggacaagtt caagaggcca ttccggaagc gtcactcggt ggcggcccac 2521 catcagccca cgaatcgggt gaaccggttc ctctcgcagg cgatcaacgc gcgttcagtg 2581 gactgcgaca agtcggaaca tgtcgatcgg ttgaccctgc gcttccggca gagcgacatg 2641 gagcgggaat atcacaagga cttcgatctg ggcttcacca cagcgatggg ctgctccctg 2701 ctgctcctga ttttgggtgc tgccctccag gtgaccgccc tgccgcgcac cctcatcctg 2761 ctgctgctct tcctcttcgc cttcatctgg gtgagcgcca tcctgatgct cctgctggcc 2821 gtgcggctca agtggatcat ctgggacatc tcggagagct tctcgctgcg catggccatc 2881 acgatattca cggtcatact catttactcc gtgggacagg tgaatgtgtt cacttgtgtc 2941 tcggaccatc catgctcggg aaatgcgacg tcctccttcc cgaacgactc gcatcgcaag 3001 tgctcgctgc cccagtacgt ctccctatcg gcggcctttg ccttcctatc agtgtccgtg 3061 ttcctcaggc ttcccatcat attcaaatcg ctgctggtgc tgggcatggg caccatctat 3121 ggcctgttca tagagctgtc gcatcagaac atcttcgagt gctacgacaa ccgggtcaac 3181 gcctcgattc cacttcactt gatctcgctg gcccgcattg gcatcttcat gattgccatt 3241 ctggtgcacg gccgcctggt ggagggcact gcccggctgg acttcctctg gcagctgcag 3301 gcctcgcagg agaagaagga gatggacgtg ctgcaggagt cgaacaagcg cattctgcac 3361 aatttgctgc ccgctcatgt ggctgcacat ttcctcgatg cgcaattccg caacaatatg 3421 gagctctacc accagagcta cgccaaggtg ggcgtcatct ttgccagcgt tccgaatttc 3481 aacgagttct acacggaaat ggatggctcc gatcagggat tggagtgcct ccgtctgctc 3541 aacgagatca tcgcggactt tgatgagctg ctgaaggagg atcgcttccg gggcatcgat 3601 aagatcaaga ccgttggcag cacctacatg gccgtcgtgg gtttgatacc cgagtacaag 3661 atccagccca acgaccccaa ttcagtgcga cgccacatga cggcactgat cgaatatgtg 3721 aaggccatgc ggcattcact gcaggagatc aacagccact cgtacaacaa ctttatgctg 3781 cgcgtgggca tcaacattgg ccccgtggtg gctggagtaa tcggagctcg gaagccgcag 3841 tacgacattt ggggcaacac ggtgaacgtg gccagccgca tggactccac cggagtgcct 3901 ggctactcgc aagtgaccca ggaggtggtc gacagcctgg tgggctcgca ctttgagttc 3961 cgttgtcgcg ggaccatcaa ggtgaagggc aaaggcgaca tggtcaccta tttcctgtgc 4021 gacagtggca ataagtcgct caacggcgag gtgcgcaatg ccatgtccct gccgcagagt 4081 ctccatgcgc cggattacta catgaaggtg gcgcagtttc cggagaatcg tgtgaacagc 4141 gatacgtaca gcaagaagcg ggaggagaat ggaggaaatt tcaccgtagg tggcgaggag 4201 cagcagctat tgctgcagca tcagcacaag cagctcgaac caccgctacc gcttccggcg 4261 ccaccgcctc ctcatcatca tctgcaccag cagcagcagc agcggctgaa cagcaagctg 4321 cagaagcaac cgatcttcat ggccaacggc ggactgccga atatccggga gaacggcaat 4381 gggcacaatg gtcacaacgg cgagcagcag cagccggctg cagtggcggt tcccctccag 4441 cagcccccaa cccagcaact ccagcaactc caacaactcc agcaccacca aatccagttc 4501 cagcacacgc cggttccagt gcagcaccag atcctactcc accaccagca tcagctgcag 4561 ctgcagcatc acaatcagcc cgttcccgtt ccttcggtaa tgttgcgcga gtttaatatt 4621 attgagaacc cgacttccgg tggccggcat ccgcagatgg agcagctgcc gccgtcgcat 4681 catggcagcc tggatcaatc gggtttggga atgggaatgg gtatgctagg cggcggcggc 4741 gactgcttca tgatgcctcg tcgagtgccg gcattaaacc agcatggcca tcatccaacg 4801 catcacctcc attcgaatct gaatatgaat atgaatcagc acccgccatc gttcaccagt 4861 ttgggctatg gccaatgccg ggagagcgag ccgctattgc atgccagcag catcgcgccg 4921 gtagccaaga taatgcccat gcagcatgcg ccaaagtacg agccaccacg ttacacttct 4981 ccccacacca tgttgtcgca ccagcagcta ccaccgcatc ctgccctcca ggagcatcag 5041 cagcagcagc aggagcttcc ccagcgacag caacaacaac agtacgccat gtactcgcag 5101 cagccgcagc tgccgccgaa gcctgcgccg ctgaggacgt acatgaagcc gctgccgaag 5161 ctgccggcgg cggaactgga ggagagccgt gacatgtcct ccaccgatga cctcagctcg 5221 cgtccgcact cgccatcgat gagcagctcg gacgagagct actcgaagac caccgagggc 5281 gagggcgaaa acgacgagga ctccaggccg cggatcccca atggagctgt ccaccaccat 5341 catcatcacc gcaatggcta taacaatggt ggtggcctgg tcaatcccct gcaatggctc 5401 tatccctgcg acattcaggt ggatcccaca tcgccggtgg tcgatctgca tgactttgag 5461 ctgagctcca ccacggagag tcagcagccc aagggcgata gttgcaatag ctttgactat 5521 cagaaggcca cggcagctgg aggaattgcc accaagtcgc cctttgagcg ggaactgcag 5581 cgactgctca acgaatcctc gagaggccgt ggtttggcca ctactgcgac tgcaactgca 5641 actgctacca cgacgaccac ggatcacacg gccagcaatg gcagccggaa tgagatgatg 5701 atgagctact ccttcagcaa tggcaagcta agtggagctg gtggctcggg atcagcggtg 5761 ggcaatggca gcggcagcag caatggcaat ctcagcggcg gcagcggcag caactcgaac 5821 agtggcaaca acaacagcgg aggtcacaag gcggatctgc agcagcagga tcctcaggag 5881 ctgaagctgc ccggcagcag cagcttcatg atcgccaagc atccggtggg cttggaggcc 5941 atcaaggaga taacgcgcaa caagaatcca tcggagtcaa gccaaatgca aacctcggac 6001 acggagtcct gcgagatcct gcacgagacg cgcaaccaga tgcacatgct ggccatgctg 6061 gagatgcaga cggccaagga gcagcagcag ctgaggacac atcgccagcg gccgcgctcc 6121 aaggagctgc agtacagcca cgagagcctg gacggactgg acggagcagc gatgcagccg 6181 cggcagccgc gcttccacca ccaccaccac caccatcatc atcaccacca gcagcagcag 6241 cagcggtaca accatgtgca ggagcaggag gagcgtgacg ataccgagga caacctggcc 6301 gacgaggagt tcgaggacga tgaagtgggt cgcgatgtgc gacagaagcg cctacagaag 6361 ccggacaaaa ccagtcacaa aaggggggag caggagcagg acgccgacga cgatgatgat 6421 gatgatgagg ttgatgatgt tgatcaagag gatgatgagg agcaggagca ggagcaccgg 6481 aacggagggc agctgccgct gacaaacggc agcagcaatg tgataaacga cgagctgaaa 6541 tacggggcgg cccatctcaa ccaccagtcc atggactcca atccgttgga gagccaatcg 6601 gaatggtcgg acgacgattg tcgcgaggag gccacagggg gcgctgaatc cacgggctac 6661 ataacggatg agcctggatt ggagaacatc tcgctgctga acgaagccgg gcttaccgat 6721 gccgagggcg ccctctcgga cgttaactcg ctgtataacg cgcccgatgt ggacgacacc 6781 tcggtgtcca gccgggccag ctctcggctg ctcagcctgg actcgctgag cggcctctac 6841 gactgcgatt tggactccaa gcacgagctg gccattgtca atgcctcgca caagatctcc 6901 agcaaattcg gacagcccac atcgccggca cagcagcaac agcagcagtt gcagcatcag 6961 catcagcagc agactcaacc tcaaatacaa gttcagtttc agtccgccga ggagctgaga 7021 gagtaaagat tgaagattga tgatgatgga gcgttaaaca ctcaaacgtt gttattgcta 7081 taatgcaaat ggtgtctaat aatttacaat aaaccaacct aaactaaagc taaagctaaa 7141 gtaaactaaa tctagaatag gtgacagata tatgtatgaa tctatatata tttatgtatg 7201 taaggaagca gaggcactta aagctgctct atggcacccc tagatgtaac tcataaatag 7261 tatatatata ttatatgcaa gaaaatctat atgtattgaa agtaagctaa acacgtagtc 7321 attggttacc cagttaagcg ttccagttac tacaatcccg cgcgaaagaa atcgaaatcg 7381 aaattataat tgatatttat gcaatgcgaa tccatgcgaa tgaattcatc atttagtgcg 7441 cttagtcctt ggtcctccta aggactgaat taactcccat atgttattaa tgtacgacta 7501 tatatatata tgtatatcat tttgataatc gaataagcaa caatttggcc atttatacga 7561 agccacacaa ccaatgcatg acaagatgta aataaagcaa aacaaaatgt tatagatatt 7621 tttccgatat tactgtaagg cttatataaa tttacccata gactgcgcca ccatgaattc 7681 gaattttaaa tttaaattta aaccgaaatt aaaactcgga taatcggata ttaaagtccc 7741 acgtggaaga tacgtaaa