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PREDICTED: Drosophila takahashii MAPK Phosphatase 4 (MKP-4), mRNA.


LOCUS       XM_017139711            2187 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017139711
VERSION     XM_017139711.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017139711.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2187
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2187
                     /gene="MKP-4"
                     /note="MAPK Phosphatase 4; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:108056071"
     CDS             162..1283
                     /gene="MKP-4"
                     /codon_start=1
                     /product="dual specificity protein phosphatase MPK-4"
                     /protein_id="XP_016995200.2"
                     /db_xref="GeneID:108056071"
                     /translation="MEQPQARPSSSSAGGKPQDSGVLTREDFDGGPVSIDEVDTGLFL
                     GNLTAATHMETLRSFKITHILTLDSVPLPQHILEASFLTTKYIQIADMPREDILQHLE
                     GCVDFISTALAQQGNVLVHCYFGVSRSSSTVIAYMMKRHNLDFLPAYELVKSKRRFVQ
                     PNAGFVSQLKLFRRMGCKIDPNCQRYKIHRLRLAGEQMRKAKILPQSFHSVVRPDPDI
                     TRENPEPIVFRCRRCRRVLASKSHVLEHKPRDRAPQEKEAPGQDQPENAIAPNAPMLE
                     QLAERLRQSSLGSPGHEATNANQCRSILFVEPIAWMHRIMLNTQGRLYCPKCEQKLGN
                     FSWINACKCPCGETMTPAFYLIPSKVELSKAVQNVQTTV"
     misc_feature    264..674
                     /gene="MKP-4"
                     /note="dual-specificity phosphatase domain; Region: DSP;
                     cd14498"
                     /db_xref="CDD:350348"
     polyA_site      2187
                     /gene="MKP-4"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gaatattaaa tatatcagag gatttttgtt tattttcgcg gaaatttaag caaaagtgtt
       61 ttttagttag atacttctta aatttaatag tttttatctg caaagatgta ctttgaatcg
      121 agcattgagg gggattagag ctggaatcgc atcacctggt catggagcag ccccaggcga
      181 gaccctcctc ctcctcggcg gggggcaaac cgcaggactc gggcgtcctc acacgcgagg
      241 actttgacgg cggacccgtg agtatcgacg aggtggacac gggcctgttt ctgggcaacc
      301 tgactgcggc cacgcacatg gagacgctgc gctccttcaa gatcacgcac atcctcacgc
      361 tggactcggt gcccctgccg cagcacatcc tggaggccag cttcctgacc accaagtaca
      421 tacagattgc cgacatgccg cgcgaggaca tcctgcagca tctggagggc tgcgtggact
      481 tcatcagcac cgctttggcc cagcagggca acgttctggt ccactgctac tttggcgtga
      541 gtcgcagctc ctccacggtg atcgcctaca tgatgaagcg tcacaacctg gacttcctgc
      601 ccgcctacga gctggtcaag tccaagcgcc gcttcgtcca gccgaacgcg ggcttcgtta
      661 gccagctgaa gctcttccgt cgcatgggct gcaagatcga tcccaattgc cagcgctaca
      721 agattcaccg gctgcgcctg gccggcgagc agatgcgcaa ggccaagatc ctgccgcaga
      781 gcttccacag cgtcgtccgt ccggatccgg atatcacgcg cgagaacccc gagccgatcg
      841 tcttccgctg tcgtcgctgc cgccgcgtcc tggcctccaa gtcgcacgtg ctggagcaca
      901 agccgcgtga cagggcgccg caggagaaag aggctcctgg ccaggatcag ccagagaatg
      961 ccatcgcacc gaatgctccg atgctggagc agctggccga gcgcctacgc caatcctcgc
     1021 tcggttcgcc cggccacgag gccaccaatg ccaaccaatg ccgcagcata ttgtttgtgg
     1081 agcccattgc ctggatgcac cgcatcatgc tgaacaccca gggccggctc tactgtccca
     1141 agtgcgagca gaagctgggc aactttagct ggataaacgc ctgcaagtgt ccctgcggcg
     1201 agacaatgac gcctgcattt tatctcatac cttccaaggt ggagctctcc aaggccgtgc
     1261 agaatgtgca gaccacagtt taggagcacg aaaaagagcg agatggcaat cccttgaagg
     1321 gagcacggaa ccacattgaa gggcatggaa atatgtttat gtagagcgat ctaagaacaa
     1381 ctgcattcct cgttttttgt ccctaacatg tgctattttc atatgttaag aaaagatgaa
     1441 ggggtagcaa attgtgctta gaactcccta caaagtatca ttatttacca actgcattgc
     1501 tgaaaatctc caccaatccg agatatataa agttataata tacttataac aacaaatcat
     1561 ttttgttctc gatggacttg cccataaaat tattcaattg taaactaaca tatctcagaa
     1621 acccacttcg gattccattt aatcggcaaa tatgcacttt tcttaagcta agaaataatc
     1681 aaaaaatggc aatataacat tgaaaatgca agttaagtga gattttgtga aacagtcgtt
     1741 tcgttaattg tttcatttta cataggtata gttagccaat atatgtattt gccgatgtaa
     1801 ttaattatac accatgccag gccatgataa tatgatacca aatatcgatt tttgctgttc
     1861 catatttgca tttgcatttg catagctttt tgcatgttac caaaacacac aaactataaa
     1921 ctataaatgt attttagata ttttaatctt tttggaaagc attttacgca aaacgaaaat
     1981 attttcaatg acaatatcta aatttacgcg attaataatg attaataatg ttataatcaa
     2041 agactttgtc agccaataac attacctggc attaccttat cgatattgat gtgctttgtt
     2101 caagatccat atatgatatg atattatgta ctgtacgtaa atgagtgtgt attgatatta
     2161 aagtctaaaa attgtttgtt ttccaca