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LOCUS XM_017139642 1851 bp mRNA linear INV 09-DEC-2024 subunit alpha-6 (LOC108056031), mRNA. ACCESSION XM_017139642 VERSION XM_017139642.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017139642.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1851 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1851 /gene="LOC108056031" /note="gamma-aminobutyric acid receptor subunit alpha-6; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108056031" CDS 232..1824 /gene="LOC108056031" /codon_start=1 /product="gamma-aminobutyric acid receptor subunit alpha-6" /protein_id="XP_016995131.2" /db_xref="GeneID:108056031" /translation="MTARSMNNRTRGYFPESLHHQSRRVSRKASSADMLSRNISMILE NLLKRYEQSQLPTHGQGVPTVVQTNILIRSMGPVSELDMDYSMDCYFRQYWRDKRLSF KGPIKSLSLSIKMLDKIWRPDTYFYNGKHSQIHMITVPNKLLRLDQNGGILYSMRLTI KATCPMELQNFPMDRQSCPLVIGSYGYINQQLIYEWKNQDDAVSFVPGMTLNQFDLIS MMHRNSTTVRREGDFSVLHVAFNLKRHTGYFLIQVYVPCILIVVLSWVSFWIHREATS DRVSLCVTSVLTLSTISLDSRTDLPKVKYATALDWFLLMSFLYCIATLLEFAGVHYFT KLGSGESPQLEDQWEDIAHSSLSDQAADGDGDGDPDPDSDSSEGTENEGAASESICAC SQKHDALGLEYEVSLQNSLAGAGFLKRNAIFCPTYNDPSYILPNTMERTTQTEPPAVS RLHQMWMCLKSDNSFRRQRERNAAAQKSEQGGANCYVNSVSLIDRVARIAFPMSFAFL NLLYWWAYGMYKKEFSWSNMKA" misc_feature 271..1779 /gene="LOC108056031" /note="Cation transporter family protein; Region: LIC; cl42365" /db_xref="CDD:455710" misc_feature 418..966 /gene="LOC108056031" /note="gamma-aminobutyric acid receptor subunit alpha-like extracellular domain in protostomia, such as GRD (GABA/glycine-like receptor of Drosophila); Region: LGIC_ECD_GABAR_GRD-like; cd19007" /db_xref="CDD:349808" misc_feature order(442..444,499..501) /gene="LOC108056031" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:349808" misc_feature order(451..453,457..462,475..480,499..501,505..510, 559..561,565..570,595..612,619..621,625..627,631..636, 652..660,664..666,694..702,784..786,964..966) /gene="LOC108056031" /note="pentamer interface [polypeptide binding]; other site" /db_xref="CDD:349808" misc_feature 721..765 /gene="LOC108056031" /note="Cys-loop [structural motif]; Region: Cys-loop" /db_xref="CDD:349808" ORIGIN 1 gcaatcaata aaagtgggca aacagtcgat tgattttata attcctgcac tctggggcga 61 aaagtgaatg aactagaaca tctacttttc aggattttca tctactgcat ttgtataggc 121 gtagggaata gtactatcca gtcgccaact tcatcggatc ttctctatat caatatcaaa 181 ataccgaata taactaatga gttcagttcg aggattttca attcagttca aatgacagct 241 cgatcgatga acaacagaac tcgcggttat ttccctgaat ccctccacca tcaaagtcgt 301 cgagtttcgc gaaaggcctc atcggccgat atgctgagtc gcaacatatc gatgatactg 361 gagaacctgc tcaagcgcta cgagcaatcg caactgccca ctcatggaca gggcgttccg 421 acggtggtcc agaccaatat actaatccgc agcatgggtc ccgtttcgga actggacatg 481 gactactcga tggactgcta cttcaggcag tattggcggg acaagcggct gagcttcaag 541 ggacccatca agagcctgtc gctcagcatc aaaatgctcg acaagatttg gcggccggac 601 acgtatttct acaacgggaa gcactcacag attcacatga ttactgtgcc caacaaattg 661 ctgcgactgg accaaaacgg aggcattctc tattcaatgc gattaacaat caaagccact 721 tgtcccatgg agctgcaaaa ctttcccatg gaccggcaat cctgtcccct tgtcatcgga 781 agctatggtt atataaacca acagctaata tatgaatgga aaaaccaaga tgatgccgtt 841 tcctttgttc cgggaatgac tttaaatcaa ttcgatctca tcagcatgat gcatcgcaat 901 tctacaactg tgcgacgcga aggtgacttt tcggtcttgc atgtagcgtt taatctgaag 961 cgtcatactg gatatttcct gattcaagtg tatgtgccct gcatactgat cgtggttttg 1021 tcctgggtct ccttttggat acatcgcgag gccacgagcg accgggtcag tttgtgcgtg 1081 acctccgtcc tgaccctatc taccattagc ttggactcgc gaaccgattt gcccaaagtc 1141 aagtatgcca ccgccctgga ttggtttctc ctgatgagct tcctctactg cattgccaca 1201 ctgttggaat ttgccggcgt tcactacttc acgaaacttg gaagcggaga gagtccgcaa 1261 ctggaggatc agtgggagga tatagctcat agctcactat cggatcaagc agctgatggg 1321 gatggggatg gtgatcctga tcctgactcg gactcgagtg aaggtaccga gaacgagggg 1381 gcggcgagtg aatcgatttg tgcctgcagc caaaaacacg atgctcttgg tctcgaatat 1441 gaggtctcat tgcaaaactc attggccggc gctggttttc tcaagcgcaa tgccatcttc 1501 tgtccaacat ataatgaccc atcgtatata ctgccgaaca ccatggagag aaccactcaa 1561 acggagccgc cggcggtttc ccgattgcac cagatgtgga tgtgcctgaa gagcgacaac 1621 agtttccgga ggcaacggga acgcaacgcg gcggcccaga agagcgaaca gggaggcgcc 1681 aactgctatg tgaatagtgt gtccctgatc gatcgagtgg cacgaatcgc cttccccatg 1741 tcctttgcct ttctcaacct gctgtactgg tgggcctacg gaatgtataa aaaggagttc 1801 tcatggtcca acatgaaggc atagacacga tgaataaatg tctataacaa t